Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2018 ATGGGAAATCTTTACTTTCATTTCTCCTCCTCCATTTTCTCCATGCTCTGTCTCATGGTTTGCCCATCTTTATGTCATTACAATTTTACCCTTGATGGATTGACACTTCTTGCTTTCAAATCTTCTATTAGGGACCCTTACAATCACTTGAAAAATTGGTCCAACTCATCATCTTCCTTTTGCAACTGGTTTGGAGTCACTTGTGATCCTAACAATGAGAGAGTGAGAATCCTGAGTCTTCCTGATCTGGGTCTTGAGGGCACCTTACCCTTGCAAATTGGAAATCTGTCCTTCCTAGAAAAACTTGAACTACAAAGCAACAACTTTCATGGTGGGCTGCCAAAAGAGTTGCTTCAATTGCGCAAATTGGAAATTCTAAACTTGAGTTATAATACTTTTAGTGGAGAAATTCCGACTTGGATTGGAAGCTTGTTTATGCTTCAACACTTGAGTCTTGGCAATAATAGTTTTGGAGGTCTCATTCCACCAAGTATATGCAATTTGTCTAATTTGGAGACGTTGGATTTGAAGTCTAATTCTATCAATGGATCTATTCCGGTGGATATTGGAAGACTTCAACACCTAAAATTTTTAAGCATTTCTAGAAACATGCTTTCAGGAAGTATACCTCCAACTATCTCTAACTTATCATCACTTGAACACATCTCATTGTCTCTCAACTTCTTAGAAGGACATATTCCCAAAGAAATGAATAAGCTTACAAATCTGAAAAATAAGTACATAGGTATGAATCAGTTGTCAGGGCAAATACCAAGCATTGGAAATTTGTTCATGCTTGAAAATTTATATCTTGCAAGCAACAGCCTCCAAGGAAATATTCCGAATGAAATAAGCAATCTTACAAATTTGAACAGCATATACTTAAGTTTTAATCAATTGTCTGGTCACATACCAAGAGGCATCGGCAAGTTCACTAGGCTTGAAGAGTTAGTTCTGGACAACAATAACTTTGAAGGAAATATTCCCAATGAAATTGTAAGTCTTGCAAATCTGAAGATGATGGGCCTAAGTGTTAATCAGCTATCTGGCCCCATACCAAGAGGCATTGGAAACTTGACTGTGCTTCAACAGTTATATCTTGGTAGCAATAATTTAGAAGATAAAGGGAAATCTAAGACGCACACAGAGACAATATCTACAATCGGTTATATTGCACCAGAATATGGATCTGTTGGAATGGTTTCAACAAAAGTTGATGTGTATAGCTATGGAATATTACTAATGGAAGTGTTCACTAGGAAAAAGCCAACAGAAGGTATGTTTGTCGATGGATTAAGCTTAAAAACTTGGATAAGTGAATCAATGTCACATGCATTGATTCAAGTCATGGATTCCAATTTATTACAAGGAGATGAACAATATGTTGGCAATACTTTGACAACTACATCCACTATTTTCAAATTGGCTTTGACTTGCTGCACTGATTTTCCAACAGAACGTTGCAATATGTTAGATGTTGTAGCGTCATTGAACAAGATCAAGGACCTGTTTGTGCAAAGAAGTCAAGTTAAAAAAAATTAA 1542 0.3638 MGNLYFHFSSSIFSMLCLMVCPSLCHYNFTLDGLTLLAFKSSIRDPYNHLKNWSNSSSSFCNWFGVTCDPNNERVRILSLPDLGLEGTLPLQIGNLSFLEKLELQSNNFHGGLPKELLQLRKLEILNLSYNTFSGEIPTWIGSLFMLQHLSLGNNSFGGLIPPSICNLSNLETLDLKSNSINGSIPVDIGRLQHLKFLSISRNMLSGSIPPTISNLSSLEHISLSLNFLEGHIPKEMNKLTNLKNKYIGMNQLSGQIPSIGNLFMLENLYLASNSLQGNIPNEISNLTNLNSIYLSFNQLSGHIPRGIGKFTRLEELVLDNNNFEGNIPNEIVSLANLKMMGLSVNQLSGPIPRGIGNLTVLQQLYLGSNNLEDKGKSKTHTETISTIGYIAPEYGSVGMVSTKVDVYSYGILLMEVFTRKKPTEGMFVDGLSLKTWISESMSHALIQVMDSNLLQGDEQYVGNTLTTTSTIFKLALTCCTDFPTERCNMLDVVASLNKIKDLFVQRSQVKKN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2018 513 Gene3D Ribonuclease Inhibitor 263 370 IPR032675 -
Prci8g2018 513 ProSiteProfiles Protein kinase domain profile. 146 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2018 513 Gene3D Ribonuclease Inhibitor 194 262 IPR032675 -
Prci8g2018 513 Gene3D Ribonuclease Inhibitor 31 188 IPR032675 -
Prci8g2018 513 SMART LRR_sd22_2 168 189 - -
Prci8g2018 513 SMART LRR_sd22_2 192 218 - -
Prci8g2018 513 SMART LRR_sd22_2 287 319 - -
Prci8g2018 513 SMART LRR_sd22_2 359 387 - -
Prci8g2018 513 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Prci8g2018 513 Gene3D Transferase(Phosphotransferase) domain 1 371 512 - -
Prci8g2018 513 FunFam Leucine-rich receptor-like protein kinase family protein 280 378 - -
Prci8g2018 513 SMART LRR_typ_2 287 311 IPR003591 -
Prci8g2018 513 SMART LRR_typ_2 335 359 IPR003591 -
Prci8g2018 513 SMART LRR_typ_2 120 144 IPR003591 -
Prci8g2018 513 SMART LRR_typ_2 216 240 IPR003591 -
Prci8g2018 513 SMART LRR_typ_2 168 192 IPR003591 -
Prci8g2018 513 Pfam Leucine rich repeat 147 205 IPR001611 GO:0005515
Prci8g2018 513 Pfam Leucine rich repeat 313 372 IPR001611 GO:0005515
Prci8g2018 513 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 70 263 - -
Prci8g2018 513 PANTHER OS01G0750400 PROTEIN 189 329 - -
Prci8g2018 513 SUPERFAMILY L domain-like 41 376 - -
Prci8g2018 513 SUPERFAMILY Protein kinase-like (PK-like) 380 497 IPR011009 -
Prci8g2018 513 Pfam Protein tyrosine and serine/threonine kinase 372 495 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2018 Prci-Chr8 20277848 20286029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2018 377 501 Receptor kinase-like Gene Family AT1G08590 30.709 8.96e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci8g2018 PK_Tyr_Ser-Thr 7.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2018 - K13420 pcin:129317447 1006.13