Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2005 ATGATTGAATATGCTAGAGGTCTTCCTTTAGCACTTAAAGTGTTGGGTTCATTTTTTAGTGTGGAAAAAACTATATCAGAATGGAAAGATGCAATGGCTAAGTTCAAGAAGATTCCTCCACATGACATTATGAAGATACTTAAAGTGAGTTTTGATGGGTTAGAAGGTGATGAGAAGACTATATTTTTAAATATTGCTTGCTTTTTTAATGGGATGGACAAAGACATTGCGATGCAAATCTCACAAAATTGTGATCTTCACCCAAAAATTGGGATAAAAGTTATAATTTATGATAAAGAGGTTTTCCAGGTGCATGATATGCTTCAAGAAATGGGTAAGAATATAGTTTTTCAAGAATCACCTAATGATGTTGGTAAACGTAATAGGATATGGTCTTTGGAGGATGCTAGTCATGTACTGGAAAATAAGGTTTTGAGAAAGCTTCATGTAATGACCTAG 459 0.3355 MIEYARGLPLALKVLGSFFSVEKTISEWKDAMAKFKKIPPHDIMKILKVSFDGLEGDEKTIFLNIACFFNGMDKDIAMQISQNCDLHPKIGIKVIIYDKEVFQVHDMLQEMGKNIVFQESPNDVGKRNRIWSLEDASHVLENKVLRKLHVMT 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2005 152 SUPERFAMILY "Winged helix" DNA-binding domain 42 141 IPR036390 -
Prci8g2005 152 Gene3D - 1 55 IPR042197 -
Prci8g2005 152 Pfam NB-ARC domain 1 38 IPR002182 GO:0043531
Prci8g2005 152 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 141 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2005 Prci-Chr8 19507787 19509144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2005 1 143 WRKY Transcription Factor Family AT5G45050 34.228 1.07e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2005 - - pcin:129317435 308.916