LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci8g2004	ATGTTCGATGTCAAAAGGGAAGTTTTGCAGAAGCATTCAAAAAGCATGAAGAAACACGAGAAAATGAAGGTGCAGAGATGGAAGGATGCATTAGAAGAAGTTCCTAACTTAGCTCGTTGGAACTCTAAAAATTGGCATGAAACAGAACTCATAAAAAGTGTTGCGGAGAAAGTGTGGACAAAATTACATAATGAATTGCCAATTGACAATGATATATTAGTCGGGATTGAATCAAAGATAGCAAAATTGGATTCAATAATCTCCAATGGATTGGAAGAAGTTCGATTCATAGGAATATGGGGTATGGGAGCGTTAGGTAAAACCACTCCCACGAGAGTTGTTTATGAGCAAATACACAAAAGCTTTGAAGTTCATTGCTTTCTTCTAGATGTTAGAGAGGCATCTGAAAAAGATGGCTTGATTTCCTTGCAAAGAAAACTTCTTTCTTATTTAAATTTAAGAAGTGAGGAATTGGATGATTGTTATGATGGAAGGAAGTTGATAAAAAACGTCTTATGCAATAGAAAAGTTCTGCTCGTCCTTGATGATGTGAGTAATACAGATCAACTTGAGAATTTAGCAGGAAAGCAAGGATGGTTCGGTCAAGGGAGTGGAATTATAATAACAACTAGAGATAGAGATATACATTTTGTTATCATTGCATGGTGTCTCTACTCAATATGA	684	0.3567	MFDVKREVLQKHSKSMKKHEKMKVQRWKDALEEVPNLARWNSKNWHETELIKSVAEKVWTKLHNELPIDNDILVGIESKIAKLDSIISNGLEEVRFIGIWGMGALGKTTPTRVVYEQIHKSFEVHCFLLDVREASEKDGLISLQRKLLSYLNLRSEELDDCYDGRKLIKNVLCNRKVLLVLDDVSNTDQLENLAGKQGWFGQGSGIIITTRDRDIHFVIIAWCLYSI	227

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci8g2004	227	Gene3D	-	2	61	IPR035897	-
	Prci8g2004	227	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	13	215	IPR044974	GO:0006952
	Prci8g2004	227	PRINTS	Disease resistance protein signature	96	111	-	-
	Prci8g2004	227	PRINTS	Disease resistance protein signature	171	185	-	-
	Prci8g2004	227	Pfam	NB-ARC domain	92	215	IPR002182	GO:0043531
	Prci8g2004	227	Gene3D	-	62	219	IPR027417	-
	Prci8g2004	227	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	63	216	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci8g2004	Prci-Chr8	19505821	19507816	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci8g2004	74	215	WRKY Transcription Factor Family	AT5G45050	33.099	1.52e-20	88.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci8g2004	-		-	pcin:129296642	452.21