Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1953 ATGAACTTCATGACAATCCCACCATGGAAGTACCATGTCTTCTTGAGCTTCAGGGGAGAAGACACCCGAAAGGGCTTCACAGACCACTTACACGCTGCTCTCAAACAAAAAGGTATCATAACTTTCAAAGATGATAAGCTCGAGAGAGGAGAGGTTATTTCTCACCAGCTCTTTCAAGCAATTGATGAATCTCTCATCTCTCTTGTTATTCTTTCTGAAACTTATGCTTCTTCGAGTTGGTGTTTGGATGAACTTCTAAGAATTCTTGAATCTAAAAAATCCTTGGGTAGAGAAGTTATCCCAGTCTTCTATAAGATTGATCCATCTGATGTTCGTCGTCAGAGAGGTACCTTTGCTTGTGCCTTTCAAAAACATAGTCAGAGATTTGCTGAAAACAAAGAGAAGGTGCAAAGATGGAGAGAGGCCTTGGAAGAAGTTGCAAATATATCTGGCTACAACTCTACAGATCAGCATGAAGCAAAACTCATTGAAGAAATTATTGCAGAAGTATGGGCAAAGGTACAGCCCAAGTTACCATGTTATTTCAACAATGAGCTCGTTGGCATAGAGTCAAGAGTAGAAGAAGTGAGTGCACTTTTAAAGATTGGATTGTGTGATGTTTGCTTCATAGGAATATGGGGCATGACAGGTATTGGAAAGACAACTCTTGCAAGAATTATCTATGAGAGAATATCTCACCAATTTGACGTTAGTTGTTTTCTTGCTAATGTAAAGGAAAACTCTGATGCCAAGGGTTTAGTTCCCTTGCAAAGAAAACTTCTTTCCCAATTCAAGATAAAAGACATGTATATTGACGATGCATACGATGGAAAGAAGATGATGAGGAATTTGTTATGCAGCAAAAAAGTTCTTGTTGTCTTGGATGATGTAAGTGAAATAAGCCAACTAGAGAACCTTTCTATGAAGAAAGCTTGGCTGGGCCCTGGGAGTAGAGTAATTGTAACAACTAAAGATATGCATGTATTGATAGGGCATGGAGAATTTGAAATTTATAAGGCCACATTCTTAAACAATGATGAATCTCTTCAACTATTATGCAAGAGGGCTTTTAAAAGGGATGAACCTTTGGAAGGTTACTTGAAGTTGTGTAAGAGCATCATCCACCATGCTCAAGGCCTTCCTTTAACTCTTGAAGTGTTGGGTTCTTATCTTTGTGGAAGAACTGAACCTGAATGGAAAGAATCTTTGGAGAAAATTAAAAGGTTTCCGCCAAGCAATATTCAAATGAGGGTTAGAATTAGTTACGATGCATTAAGTGATATGGACAAGAAAACATTTTTAGATCTTGCATGTTTTTTTAAGGGAATGAACAAAGATCAAGTGACAAAAATATTTGAAGTGTGTGGTTTTTTTCCGGTTCTTGGAATAAGAGAACTTGTTGAGAAATGCTTGATAACTGAATATCATTATGACCACGGCACGTGTTTGGGTATGCATGATGTCCTTCAAGAAATGGGCAGAAGTATTGTTTTTGAGGAATCCCCAGGGGATGCTGGCAAAAGAAGTAGGATATGGTCACGAGAAGATATAGATCATGTATTGACTAATAACAAAGGATCTAATTTGATAGAAGTTATACATCTTCAGTCATCTATACCATATGAAGCAAATTGGGATTCTGAAGCATTTTCTAGTATGTGTAGTCTCAGAATACTCATCATCTCATGTAATGTGTACCTTCCTCATGGTCTCACATGTCTTCCTAGTTCATTGAAAATTCTTGAATGGGAAGCATATCCTTTGCAATCTCTTCCACACGGAGTTCATCTGTATCGACTTGTTCTCCTAAAAATGCATCACAGCAAGATCATACACCTTTGGGAGAGAACACAAGTATGGTTTTTTTTATGCCTAACCAAATATAGCTCAATATTGTTACACAATCTTTTAAAGCTAATCCCCTTACACTTGTATTGTTTTGAGCAGATGTTAGAAAACTTAAAGTGCATTGATTTGAGATACTCTGAAGATTTCATAAGAACTCCTGATTTTTCTATGATTCCCAATCTTGAGCAACTGGTTCTTGAAGGTTGTGTAAAATTGGTTGAAGTTCACCCATCACTTGGAGAGCATAAGAAACTTGTTGTATTGGACCTGAAAGACTGCAAGAATCTTAAAGCTCTTCCTAGTAAAATGGAAATGGATTCATTAGAGAAATTGATCCTTTCTGGATGCTTAAAAGTTAAAAAGCTTCCAGAGTTTGGGAAAAGTATGAATAGTTTATTGGTTCTTGATGTGAAAAATTGCCAAAACCTTGTTTGTCTTCCAAATTCCACTTGTAATCTGAAATCCCTAAGAATTCTTAATATTTTAGGTTGCTCAAAGTTTTCCTCTTTGCCTCATAATATTGATGGAAATAAGTGTTTAGAGGAGCTTAATTTGAGTGGAACTGCTATACGAGAAATACCTTCATCCATCATTGGCCTACAAAATTTGAAGTCACTATATTTGAAAGGATGTAATGGTCTAAGTTCAACATCCTATTCATTAGGAAACTTGCTTTCCCGAATTCCAAGAGTATTTGGGTTCGTTATTCATGAAGCTCCGACTAGATTGGTGTTTCCTCTTTCAATCTTAGGTCTAGCATCATTGAAGGAATTGGATATAAGTGATTGCAATCTCAAAAAAATTCCAAATGCTCTTAGTTGCTTACCTTCATTGGAGATCCTTGATTTGAGCAAAAATGATTTCGGCAACTTGCCTGATGGCAGTTGCATTCTTCCTTCTTCATTCTCACATCTTTCATCATTGAAGTCTTTGACATTAGATAATTGCAATCTCCGTGATGGGTCAATTCCTGAAAATCTTAGCTTCTTATCATCGTTGCAGAGTCTTAGTGTAAATCAAAACAAATTTACCCATCTTCCTGCTCAATGTGTTGCTAATCTATCACTTCTGTCTCTTCTTCGTTTGAGCTATTGCCCAAATCTCAAATATTTACCAGATCTTCCGCCTAACCTAAAGCAGATAGATACAATTGCTTGTCATTCAATGCAACCTTTATCTTTCTCAGAGTTTGTATCCATTTTGATCAAATCTGGTCTTGATTTTTCAAAATCCTTTCCTTCTAGGATTTCAAATAAAATGGTTTACAAATCCTGGTGGACGTTGGAAAGTGATATCCCATCATGGTTCCATAATCAAAATATCCAATTTCATGATAAAGTTGATGCCTTTCAAGATAATCATGTTCAAATTTCTGAGATAAAAATCTCTTGTCAAGATTTTTGTCCATGTCATCGCATTTTGATTGATGGTTTTGAACCATCAGATTCCATTGTGTCAGTAAAAGTAGACATCTCTCATGTTTGTGGCTCGGGTGTATGGTGGGGAATTTCTCTCTGCATTGTTCTACAAGATCAGGACCTTCCAGTGTCTGGTGAAGATGTGTTCCATCGAAAGCTATTGTTAGCTTATAAATCTTCACATGATGATTTCTTCAAACATAGGGATTCTTGGATGGTTGGGATGGGAAACAATCCACATCAAATGTTAATGACTTATTTTCCTAGCAGTAATTTCATAGTTGATTGTGACCAGATTGAATTCATATTTTATACGCAAAAATATAAGCACAGAGGCAGGGAATCACAATGGGAAGGGAAAGTTGATTTGCAAAATCTGAGCAAGTTTGTGATAAGCAAGTGCGGGTGGCGTGTGATAAGCGAAGAAGATGTTGAAGAATGTCATAGATCAATGAATGAATGCGATACAAGTGGTAATAACAATGAAATCCCTTCTCAACACTCACTTTATGCTTACGGAAAGAGATCCCACCAAGTTGAAGAAGTGGCAGAAGAGGACAACACTGTGGTTAGTGATGAAGCAGAAACATCTTCTGCTAAACGAAGAAAACTCTAA 3882 0.3681 MNFMTIPPWKYHVFLSFRGEDTRKGFTDHLHAALKQKGIITFKDDKLERGEVISHQLFQAIDESLISLVILSETYASSSWCLDELLRILESKKSLGREVIPVFYKIDPSDVRRQRGTFACAFQKHSQRFAENKEKVQRWREALEEVANISGYNSTDQHEAKLIEEIIAEVWAKVQPKLPCYFNNELVGIESRVEEVSALLKIGLCDVCFIGIWGMTGIGKTTLARIIYERISHQFDVSCFLANVKENSDAKGLVPLQRKLLSQFKIKDMYIDDAYDGKKMMRNLLCSKKVLVVLDDVSEISQLENLSMKKAWLGPGSRVIVTTKDMHVLIGHGEFEIYKATFLNNDESLQLLCKRAFKRDEPLEGYLKLCKSIIHHAQGLPLTLEVLGSYLCGRTEPEWKESLEKIKRFPPSNIQMRVRISYDALSDMDKKTFLDLACFFKGMNKDQVTKIFEVCGFFPVLGIRELVEKCLITEYHYDHGTCLGMHDVLQEMGRSIVFEESPGDAGKRSRIWSREDIDHVLTNNKGSNLIEVIHLQSSIPYEANWDSEAFSSMCSLRILIISCNVYLPHGLTCLPSSLKILEWEAYPLQSLPHGVHLYRLVLLKMHHSKIIHLWERTQVWFFLCLTKYSSILLHNLLKLIPLHLYCFEQMLENLKCIDLRYSEDFIRTPDFSMIPNLEQLVLEGCVKLVEVHPSLGEHKKLVVLDLKDCKNLKALPSKMEMDSLEKLILSGCLKVKKLPEFGKSMNSLLVLDVKNCQNLVCLPNSTCNLKSLRILNILGCSKFSSLPHNIDGNKCLEELNLSGTAIREIPSSIIGLQNLKSLYLKGCNGLSSTSYSLGNLLSRIPRVFGFVIHEAPTRLVFPLSILGLASLKELDISDCNLKKIPNALSCLPSLEILDLSKNDFGNLPDGSCILPSSFSHLSSLKSLTLDNCNLRDGSIPENLSFLSSLQSLSVNQNKFTHLPAQCVANLSLLSLLRLSYCPNLKYLPDLPPNLKQIDTIACHSMQPLSFSEFVSILIKSGLDFSKSFPSRISNKMVYKSWWTLESDIPSWFHNQNIQFHDKVDAFQDNHVQISEIKISCQDFCPCHRILIDGFEPSDSIVSVKVDISHVCGSGVWWGISLCIVLQDQDLPVSGEDVFHRKLLLAYKSSHDDFFKHRDSWMVGMGNNPHQMLMTYFPSSNFIVDCDQIEFIFYTQKYKHRGRESQWEGKVDLQNLSKFVISKCGWRVISEEDVEECHRSMNECDTSGNNNEIPSQHSLYAYGKRSHQVEEVAEEDNTVVSDEAETSSAKRRKL 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1953 1293 Gene3D - 8 174 IPR035897 -
Prci8g1953 1293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 436 IPR027417 -
Prci8g1953 1293 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 152 IPR035897 -
Prci8g1953 1293 Gene3D - 342 426 IPR042197 -
Prci8g1953 1293 SUPERFAMILY L domain-like 861 1018 - -
Prci8g1953 1293 PRINTS Disease resistance protein signature 743 759 - -
Prci8g1953 1293 PRINTS Disease resistance protein signature 377 391 - -
Prci8g1953 1293 PRINTS Disease resistance protein signature 209 224 - -
Prci8g1953 1293 PRINTS Disease resistance protein signature 284 298 - -
Prci8g1953 1293 SMART till_3 10 149 IPR000157 GO:0007165
Prci8g1953 1293 MobiDBLite consensus disorder prediction 1270 1293 - -
Prci8g1953 1293 Pfam NB-ARC domain 192 423 IPR002182 GO:0043531
Prci8g1953 1293 Pfam TIR domain 10 179 IPR000157 GO:0007165
Prci8g1953 1293 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 176 - -
Prci8g1953 1293 Gene3D - 175 333 IPR027417 -
Prci8g1953 1293 ProSiteProfiles TIR domain profile. 9 178 IPR000157 GO:0007165
Prci8g1953 1293 SMART LRR_typ_2 891 914 IPR003591 -
Prci8g1953 1293 SMART LRR_typ_2 794 816 IPR003591 -
Prci8g1953 1293 SMART LRR_typ_2 946 969 IPR003591 -
Prci8g1953 1293 SMART LRR_typ_2 921 945 IPR003591 -
Prci8g1953 1293 SMART LRR_typ_2 868 890 IPR003591 -
Prci8g1953 1293 Gene3D Ribonuclease Inhibitor 513 734 IPR032675 -
Prci8g1953 1293 ProSiteProfiles Leucine-rich repeat profile. 870 892 IPR001611 GO:0005515
Prci8g1953 1293 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 740 IPR044974 GO:0006952
Prci8g1953 1293 Gene3D Ribonuclease Inhibitor 737 848 IPR032675 -
Prci8g1953 1293 Pfam Leucine rich repeat 865 904 IPR001611 GO:0005515
Prci8g1953 1293 Gene3D Ribonuclease Inhibitor 855 1080 IPR032675 -
Prci8g1953 1293 SUPERFAMILY L domain-like 485 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1953 Prci-Chr8 18649701 18656590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1953 721 927 WRKY Transcription Factor Family AT4G12020 27.273 1.82e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1953 - - pcin:129317909 2569.65