Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1950 ATGACTAACGGTTTTGTTGGCTTACAAAGAAAACTTATTTCCAAGCTCAAGATAAGAGACTTAGAAGTTGATGATGCATATGAAGGAAAGAATTTGATAAGAAATTTGTTCAGCAATAGGAAACTACTAGTTGTGCTAGATGATGTAAGTGAAATAAGCCAACTAGAGAACCTTTCAATAAAGAAAGCATGGTTTGGTTCTAGAAGTAAGGTTATTGTGACAACTAGAAATATACAAGTGTTGATGGTGCATGGAGAATTTGAAACATACAAGGCTAAATTATTAAATGATGGCGAATCTCTTCAACTTCTTTGCAAGAGGGCTTTTAAAATGGACAAACCTAAAAAAAATTTTCTCAAGTTATATAAAAGTGTCATCCACTATGCTAAAGGCCTTCCTTTGACTCTTGAAGTCTTGGGTTCTTACCTTTGTGGAAGAAGTGAACTTGAATGGAATGTAGCTTTAGAGAAAATTAAAAAGTTTCCACCAAGTAGTATTCTAAAGAGACTTAGAATAAGCTATGATGCATTAGGTGATGTGGAAAAGAAAATCTTTTTGGACATTGCATGTTTTTTCAAGGGAATGGTCAAAGATCAAGTTATGCAAATATTTGAAATATGTGGACTTTATCTATTACTTGCAATAAGAGAACTTGTGGAAAAATGCTTGATAGTTGAATACTATTTTGATTATGGTACTTGGTGTTTTGGTATGCATGATATCCTTCAAGAAATGGGTAAAAGTATTATTTTGGAGCAATCACCCAATGATGCTAGTAAAAGAAGTAGGTTATGGTCAGTAGAAGATATTGACCGCATGATGACAAACAACAAAGGTTCTGATATGGTGGAAGTTATACATCTTCAATCAACTATGCCATATGAGATGCTGGAAAAGATGAAGTTCATTGATCTAAGTTATTCTGAAGATTTTAGTAGAACTCCTAATTTTTTTATGCTTCCTAACCTTGAGCAACTAGTTCTCAAAGGTTGCATAAAACTTGATGAGGTTCACCCATCACTTGGACAACTTAAGAAACTTGTTGTACTTGACTTGAAAGATTGCAAGAATCTTAAGGCTCTTCTACTTAGAATGGAAATGGATTCATTAAATAAATTGATCCTTTCTGGTTGCTCAAAAGTTAAAAAGCTTCTTGAGTTTGGAGAAAATATGACCAACTTGTTTATCCTTGATCTCAAAAATTGCAAAAACCTTGTTTGTCTTCTAAGGTCTACATGTAACCTAAAATCTCTCAAAAGTTTTAATATTTTAGGTTGCTCAAAATTTTCTACATTGCCACAAAATCTAAATGAAAATAAGGTCCTAAAGGAGCTTGATTTGAGTATAACTGCCATCAAAGATGTACCTTCATCCATCATTGGCCTACCAAATTTAAAGTTACTATATTTGAATGGATGTAAAGGTCTAAGTTCAAGATCCAATTCATTAGGAAGGAGCTTGCTTTCCCCAATTCGAAAAATATTTGGGTATGATAATGAAGCTCCCACAAGATTGGTGTTTCCTTCTTTCATCTCAAGTGTAGTGTCATTAAAGGAATTGTATTTAGATGACTGCAATTTGAAAGTTGGATCAATTCTAAATGATCTTGGTCATTTGTCATCACTAGAGTTACTTAGTTTGAGTGGAAATGACTTTAACAATATACCTGCTTGTAACTGGTTACTTTCATCTTTATCCTCATGTCCTTCCTCATTGAAGACTTTAAACATATGTCAATGCAATCTTAATGATGGGTCAATTCTCGAAGATCTTGGTTTTTTACCATCACTGATTCAACTTGGTCTACTAGGAAACAATTTCACACATTTACCTTCTTGTTGTATCTTTAATCTTTTTCATCTTCATACTCTTCATTTGAGTCACTGCCCAAGGCTAAAATTTTTGCCAAACCTTTCACCAAATTTACAACGTATAGATACAGATGCTTGTCATTCATTGCAACCATTATCATTTCCAGAGTTGCTACTGAAGTGCATTGCATTTGCAAATGCTTCTATGGCATATTTTTCACAAAGCCATGTATACAACATGGAATTGGTTTTCTGGTGGATTCTAGGGAATGAGATCCCATCATGGTTCTATAATCAAGACTTCCAAGTTCTTGACAAAATTGTTGGGTTTCAAGATAACTATATAGTCTGA 2163 0.3352 MTNGFVGLQRKLISKLKIRDLEVDDAYEGKNLIRNLFSNRKLLVVLDDVSEISQLENLSIKKAWFGSRSKVIVTTRNIQVLMVHGEFETYKAKLLNDGESLQLLCKRAFKMDKPKKNFLKLYKSVIHYAKGLPLTLEVLGSYLCGRSELEWNVALEKIKKFPPSSILKRLRISYDALGDVEKKIFLDIACFFKGMVKDQVMQIFEICGLYLLLAIRELVEKCLIVEYYFDYGTWCFGMHDILQEMGKSIILEQSPNDASKRSRLWSVEDIDRMMTNNKGSDMVEVIHLQSTMPYEMLEKMKFIDLSYSEDFSRTPNFFMLPNLEQLVLKGCIKLDEVHPSLGQLKKLVVLDLKDCKNLKALLLRMEMDSLNKLILSGCSKVKKLLEFGENMTNLFILDLKNCKNLVCLLRSTCNLKSLKSFNILGCSKFSTLPQNLNENKVLKELDLSITAIKDVPSSIIGLPNLKLLYLNGCKGLSSRSNSLGRSLLSPIRKIFGYDNEAPTRLVFPSFISSVVSLKELYLDDCNLKVGSILNDLGHLSSLELLSLSGNDFNNIPACNWLLSSLSSCPSSLKTLNICQCNLNDGSILEDLGFLPSLIQLGLLGNNFTHLPSCCIFNLFHLHTLHLSHCPRLKFLPNLSPNLQRIDTDACHSLQPLSFPELLLKCIAFANASMAYFSQSHVYNMELVFWWILGNEIPSWFYNQDFQVLDKIVGFQDNYIV 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1950 720 Gene3D - 94 178 IPR042197 -
Prci8g1950 720 Pfam NB-ARC domain 10 162 IPR002182 GO:0043531
Prci8g1950 720 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 369 481 IPR044974 GO:0006952
Prci8g1950 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 188 IPR027417 -
Prci8g1950 720 Gene3D - 2 88 IPR027417 -
Prci8g1950 720 SUPERFAMILY L domain-like 238 681 - -
Prci8g1950 720 Gene3D Ribonuclease Inhibitor 501 680 IPR032675 -
Prci8g1950 720 Gene3D Ribonuclease Inhibitor 274 500 IPR032675 -
Prci8g1950 720 PRINTS Disease resistance protein signature 36 50 - -
Prci8g1950 720 PRINTS Disease resistance protein signature 342 358 - -
Prci8g1950 720 PRINTS Disease resistance protein signature 129 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1950 Prci-Chr8 18595691 18598290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1950 31 491 WRKY Transcription Factor Family AT5G45050 29.862 1.29e-38 152