Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1949 ATGGGTAGAAGTATTGTTTTGGAGGAATCCAAGGATGTTGGCAAAAGAAGCAGGATATGGTCACGAGAAGATATAGATCATGTAATATCTAAAAACAAAGGATCTGATTTGATAGAAGTTATATATCTTCAATCATCTATACCATATAAAGCAAATTGGGGTTCTGAAGCATTCTCTAGTATGTGGAGTCTTAGAATACTAATCATCTTATGTAATGTGTATCTTCCTCATGGTCTCACATGTCTTCCTAGTTCATTGAAAATTCTTGAATGGCAAGCATATCCTTTGCAATCTCTTCCACACAGAGTTCATCTATTGGCGTTTCCTCCACTAATCTCAAGTCTTGCATCATTGAAGGAATTGGATATAAGTGACTACAATCTCAAAATAATTCCAAATGCTCTTGGTTGCTTACCTTCATTGGAGGTCCTTGATTTGAGCAAAAACAATTTTGAAAACTTGCCTGATGGCAGTTGTGTTTTTCCACCTTCATTCTCAGGTCTAGCATCATTCAAGGCATTGAATATAAGTGACTGCAATCTTAAAACAATTCCAAATGTTCTTGGTGGCTTACCTTTATTGGAGTTCCTTGATTTGAGTGAAAATGATTTCAGCAACTTGCTTGATGGCAATTGTGTTCTTCCTCCTTCATTCTCATGTCTTTCCTCATTGAAGTTTTTGAAATTAATTAATTGTAATCTCCGTGATGGATCAATTCCTAAGGATCTTAGTTGCTTATCATCATTGAAGGAACTTGATCTAACTGGAAACAAAATTACCCATCTTCCTGCTCAATGTGTTGCTAATCTATCACTTCTGTCTACTCTTCATTTGAGCTATTGCCCAAAGCTTAAATATTTGTCAAATCTTCCGCCTAACCTATAG 885 0.3582 MGRSIVLEESKDVGKRSRIWSREDIDHVISKNKGSDLIEVIYLQSSIPYKANWGSEAFSSMWSLRILIILCNVYLPHGLTCLPSSLKILEWQAYPLQSLPHRVHLLAFPPLISSLASLKELDISDYNLKIIPNALGCLPSLEVLDLSKNNFENLPDGSCVFPPSFSGLASFKALNISDCNLKTIPNVLGGLPLLEFLDLSENDFSNLLDGNCVLPPSFSCLSSLKFLKLINCNLRDGSIPKDLSCLSSLKELDLTGNKITHLPAQCVANLSLLSTLHLSYCPKLKYLSNLPPNL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1949 294 Gene3D Ribonuclease Inhibitor 21 294 IPR032675 -
Prci8g1949 294 PANTHER - 75 289 - -
Prci8g1949 294 ProSiteProfiles Leucine-rich repeat profile. 248 269 IPR001611 GO:0005515
Prci8g1949 294 Pfam Leucine rich repeat 113 151 IPR001611 GO:0005515
Prci8g1949 294 Pfam Leucine rich repeat 246 281 IPR001611 GO:0005515
Prci8g1949 294 Pfam Leucine rich repeat 164 204 IPR001611 GO:0005515
Prci8g1949 294 SUPERFAMILY L domain-like 51 288 - -
Prci8g1949 294 PRINTS Leucine-rich repeat signature 194 207 - -
Prci8g1949 294 PRINTS Leucine-rich repeat signature 246 259 - -
Prci8g1949 294 ProSiteProfiles Leucine-rich repeat profile. 140 161 IPR001611 GO:0005515
Prci8g1949 294 SMART LRR_typ_2 168 190 IPR003591 -
Prci8g1949 294 SMART LRR_typ_2 191 212 IPR003591 -
Prci8g1949 294 SMART LRR_typ_2 246 269 IPR003591 -
Prci8g1949 294 SMART LRR_typ_2 115 137 IPR003591 -
Prci8g1949 294 SMART LRR_typ_2 138 161 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1949 Prci-Chr8 18355093 18356708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1949 2 264 WRKY Transcription Factor Family AT4G12020 30.422 1.90e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1949 - - pcin:129317421 572.392