Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1947 ATGAACTTGATGACAATCCCACCATGGAAGTACCATGTCTTCTTGAGCTTCAGGGGAGAAGACACCCGAAAAGGCTTTACAGACCACTTGTATGCTGCTCTAAAACAAAAGGGTATCATAACTTTCCAAGATGATAAGCTCCAGAGAGGAGAGGTTATTTCTCACCAACTCCTCCAAGCAATTGATGAATCTCTCATCTCTCTTGTTATTCTTTCTGAAACTTATGCTTCTTCGAGTTGGTGTTTGGATGAACTCCAAAGGATTCTTGAATCTAAAAGATCTCTGGATAGAGAAGTTATCCCAATCTTCTATGAGATTGATCCATCCGACGTGTGTCATCAGAGAGGTACCTTTGCTTGTGCCTTTCAGAAACATAGTCTCAGATTTGCTGAAAACAAAGAGAAGGTGCAAAGATGGAGAGATGCCTTGGAAGAAGTTTCAAATATATCTGGCTATGACACTACAGATCAGCATGAAGCAAAACTCATTGAAGAAATTATCGCACAAGTATGGGCAAAGGTACAGCCTAATTTACCATATTGTTTTGATGATGAGCTCGTTGGCATTGAGTCAAGAGTAAAAGATGTGAGTGCACTTTTAAAGATTGGATTATGTGATGTTGGCTTCATAGGAATATGGGGCATGACAGGTATTGGAAAGACAACTCTTGCAAGAATTATCTATAAGAGAATATTTCACCAATTTGACGTTAGTTGTTTTCTTACTAATGTTAAAGAAAACTCTAAAGCCAAGGGTTTGGTTCCCTTGCAAAGAAAACTTCTTTCCAAATTCAAGATAAAAGACATGGATATTGACGATGCATACGAAGGAAAGGATATGATAAGGAAGTTGTTATGCAGCAAAAAAGTTCTTGTTGTCTTGGATGATGTAAGTGAAATAAGCCAACTAGAGAACCTTTCCATGAAGAAAGCTTGGCTGTGTCTTGGGAGCAGAGTAATTGTAACAACTAAAGATATGCATGTATTGATAGGGCATGGAGAATTTGAAATTTATAAGGCTACTTTCTTAAACAATGATGAATCTCTTCAACTGTTATGTAAGAGGGCTTTTAAAAAGGATGAACCTCTGGAAGGTTACTTGAAGTTGTGTGAGAGTGTCATCCACCATGCTCAAAGCCTTCCTTTAACTCTTGAAGTGTTGGGTTCTTATCATTGTGGAAGAAGTGAACTTGAATGGAAAGAAGCTTTGGAGAAAATTAAAAGGTTTCCGCCAAGCAATATTCTAATGAGACTTAAAATCAGTTACGATGCATTAAGTGATATGGAAAAGAAAATATTTTTAGATCTTGCATGTTTTTTTAAGGGAATGAATAAAGAACAAGTGACACAAATATTTGAAATGTGTGGTTTTTGTCCTGTGCTTGGAATAAGAGAACTTGTTGAGAAATGCATGATAACTGAATATTATTATGACCATGGTGTGTGTTTGGTATGCATAATATCCTTCAAGAAATGGGAAGGATTATTGTTTTGGAGGAATCCCCAAAGGATGTTGGCAAAAGAAGTATGA 1530 0.3686 MNLMTIPPWKYHVFLSFRGEDTRKGFTDHLYAALKQKGIITFQDDKLQRGEVISHQLLQAIDESLISLVILSETYASSSWCLDELQRILESKRSLDREVIPIFYEIDPSDVCHQRGTFACAFQKHSLRFAENKEKVQRWRDALEEVSNISGYDTTDQHEAKLIEEIIAQVWAKVQPNLPYCFDDELVGIESRVKDVSALLKIGLCDVGFIGIWGMTGIGKTTLARIIYKRIFHQFDVSCFLTNVKENSKAKGLVPLQRKLLSKFKIKDMDIDDAYEGKDMIRKLLCSKKVLVVLDDVSEISQLENLSMKKAWLCLGSRVIVTTKDMHVLIGHGEFEIYKATFLNNDESLQLLCKRAFKKDEPLEGYLKLCESVIHHAQSLPLTLEVLGSYHCGRSELEWKEALEKIKRFPPSNILMRLKISYDALSDMEKKIFLDLACFFKGMNKEQVTQIFEMCGFCPVLGIRELVEKCMITEYYYDHGVCLVCIISFKKWEGLLFWRNPQRMLAKEV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1947 509 Pfam TIR domain 10 188 IPR000157 GO:0007165
Prci8g1947 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 436 IPR027417 -
Prci8g1947 509 Gene3D - 8 176 IPR035897 -
Prci8g1947 509 Gene3D - 343 432 IPR042197 -
Prci8g1947 509 SMART till_3 10 149 IPR000157 GO:0007165
Prci8g1947 509 ProSiteProfiles TIR domain profile. 9 174 IPR000157 GO:0007165
Prci8g1947 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 475 IPR044974 GO:0006952
Prci8g1947 509 Pfam NB-ARC domain 204 412 IPR002182 GO:0043531
Prci8g1947 509 Gene3D - 177 333 IPR027417 -
Prci8g1947 509 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 152 IPR035897 -
Prci8g1947 509 PRINTS Disease resistance protein signature 377 391 - -
Prci8g1947 509 PRINTS Disease resistance protein signature 284 298 - -
Prci8g1947 509 PRINTS Disease resistance protein signature 209 224 - -
Prci8g1947 509 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1947 Prci-Chr8 18293995 18326222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1947 11 494 WRKY Transcription Factor Family AT4G12020 27.789 3.27e-48 177