Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1946 ATGGCAATTAGCGCTGAAACAGCCTCTATGTCCTCCTCTTCAGCTATCTCACCATGGAAGTATCATGTTTTCTTGAGTTTCAGGGGAGCAGATACTCGCACAGGCTTCACAGACCACTTACACGCTGCTCTTAAACAAAGAAGTATCGAAACTTTTATCGATGACGATGAGCTTGAGAGAGGAGAGATTATTTCTGACCAACTACTTCAAGCAATTGATAAATCTCTCATCTCCCTTATGATTCTTTCTGAAAAATATGCTTCCTCACGTTGGTGTTTGGATGAACTCCAAAGAATTCTTGAATCTAAAAAGTGTTTGGGGAGAGAAGTTATCCCAGTATTCTATAAAATAGATCCATCTCATGTAAGATATCAAGGAGGAGCCTTTGCACATGCATTTCAAAAACATGTTGAGAGATATGATCCTAAGAAGGTGCAAGGATGGAGAGATGCCTTAAAAGAAATTGAAGATATATCTGGCTATCACTCTTTAAATAGGCATGAATCAAAGCTCATCGAGGAAATTGTCATACAGTTTTGGACAAAATTACAACCTAGACAACCATATGACAAAAATGAATTTGTGGGTATTAAGTCAACGACAGACAAACTGAGTTCAATTTTCAGGATAGGGTTGGATGATGTACGCTTGCTTGGAATATGGGGAATGGGCGGTCTAGGCAAAACATCTCTTGCAAGAGCTATTTATCAAAGGATTCAAAGCCAATTTGATGCCTCATACTTCTATGCCAATGTTAGGGAAATTTCTAAAAAGAAGGGATTGGTTCACTTGCAGAGAAAATTTCTTTCATGTTCTCTACAGCTGAGAAACAAGGAATTTGATCATATTGATGATGAATATGAAGGAAAGAACATGATAAAAACATTTTTATGCAACCAGAAAGTTTTAATGGTATTGGATGATGTTAGTGAAATGAGCCAACTCGAATTCCTTGCAGCAAAGAAAGATTGGCTAGGTCCAGGAAGTAGAGTAATAGTGACAACCAGGGATAAGAAACTATTGACAGTGCATGGAGAATTTGAAACATATGTAGCAGACTTTTTGAATGATGAGGAATCACTTCAACTTCTTTGTCAATCGGCTTTTAAAAGTGATCAACCACCAGTTGATTATTTGGAGTTGTCTAAAAGTGTAGTTGAACAAGCCGCAGTCCTTCCTTTGACACTTAAAATGCTGGGTTGTCATCTTTGTGGAAGAAATATGCTTGAGTGGAAAGATGTTTTGGGGAAAATGAAGAAAGTTCTACCAAATGACATTATGAAAGGACTTCAAATAAGTTATGTGGATATTCATCCAAATGAACTTGTTGAACTCAAAATGCAATGCAGTAATACTGTACAACTTTGGAATGATACACTTATGTTTGAAAAGCTGAAGTTTATGGATTTAAGTCATTCTGAAGATCTGATTTATACTCCTAATTTTTCAATGCTTCCAAATCTTGAGCGATTGATTCTTGAAGGCTTTGTAAAACTTGTTAAGGTTCATCCATCCCTGGGACAACATAAGAAAATTAATATTGTGAGTTTGAAAGATTGCAAAAATCTTAAAGCTCTACCTAGTAGATTGGAAATGGATTCTTTGAGAAAATTGATTCTCTCTGGCTGCTCAAAATTTAGAAAGCTTCCTGAGTTTGGGGAAAACATGGAGTACTTATCAATAATTGAGTTGAAAGATTGCAAAAATCTTGCATGCCTTCCAGATTCTATTAGTAACTTAAAGTCTCTTAGAAGTCTCAATATAGATGGCTGTGCAAAATTTCAATCATTGCCAAATAATTTGGATGAAGACGAAGGTATAGAAGAGTTGGATGTGAGTGGAACCGCTATAACATCAATACCTTCATGCATTGTTGGTTTGAAACAATTAAGTAAACTATATGTAGATGGATGCAATGGTTCTTCATCAAACTCATTATGA 1941 0.3601 MAISAETASMSSSSAISPWKYHVFLSFRGADTRTGFTDHLHAALKQRSIETFIDDDELERGEIISDQLLQAIDKSLISLMILSEKYASSRWCLDELQRILESKKCLGREVIPVFYKIDPSHVRYQGGAFAHAFQKHVERYDPKKVQGWRDALKEIEDISGYHSLNRHESKLIEEIVIQFWTKLQPRQPYDKNEFVGIKSTTDKLSSIFRIGLDDVRLLGIWGMGGLGKTSLARAIYQRIQSQFDASYFYANVREISKKKGLVHLQRKFLSCSLQLRNKEFDHIDDEYEGKNMIKTFLCNQKVLMVLDDVSEMSQLEFLAAKKDWLGPGSRVIVTTRDKKLLTVHGEFETYVADFLNDEESLQLLCQSAFKSDQPPVDYLELSKSVVEQAAVLPLTLKMLGCHLCGRNMLEWKDVLGKMKKVLPNDIMKGLQISYVDIHPNELVELKMQCSNTVQLWNDTLMFEKLKFMDLSHSEDLIYTPNFSMLPNLERLILEGFVKLVKVHPSLGQHKKINIVSLKDCKNLKALPSRLEMDSLRKLILSGCSKFRKLPEFGENMEYLSIIELKDCKNLACLPDSISNLKSLRSLNIDGCAKFQSLPNNLDEDEGIEELDVSGTAITSIPSCIVGLKQLSKLYVDGCNGSSSNSL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1946 646 Gene3D - 17 185 IPR035897 -
Prci8g1946 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 439 IPR027417 -
Prci8g1946 646 SUPERFAMILY L domain-like 430 641 - -
Prci8g1946 646 Gene3D - 186 348 IPR027417 -
Prci8g1946 646 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Prci8g1946 646 Pfam NB-ARC domain 214 420 IPR002182 GO:0043531
Prci8g1946 646 Gene3D Ribonuclease Inhibitor 434 646 IPR032675 -
Prci8g1946 646 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 437 551 IPR044974 GO:0006952
Prci8g1946 646 SMART till_3 20 158 IPR000157 GO:0007165
Prci8g1946 646 Pfam TIR domain 20 195 IPR000157 GO:0007165
Prci8g1946 646 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 185 - -
Prci8g1946 646 PRINTS Disease resistance protein signature 389 403 - -
Prci8g1946 646 PRINTS Disease resistance protein signature 296 310 - -
Prci8g1946 646 PRINTS Disease resistance protein signature 217 232 - -
Prci8g1946 646 PRINTS Disease resistance protein signature 530 546 - -
Prci8g1946 646 Gene3D - 354 433 IPR042197 -
Prci8g1946 646 ProSiteProfiles TIR domain profile. 19 183 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1946 Prci-Chr8 18241609 18246275 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1946 437 636 WRKY Transcription Factor Family AT4G12020 33.333 1.85e-21 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1946 - - pcin:129317420 1275.38