Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1945 ATGGATGTCATAAATCAGTTAGGGATAGGAGAGAACAATTTCGTTGCTGTCATGGATTTGAAGAAGAAGGAGAAAAGAATAGCACCCACCTCCAACGAAGCTAAAGTGGCAACACCTATAAATCCAGCATGCCTAACGCTGAAGCAGGAAAGGGAAGAGTTTCGACTTGCTCTATTAGCCTCACAACAGCGAAGGAATAACAGAGAAGAGATCCAGCTAGCCTACGTAAAAGAAGGAGAAAAGAAGGGCTTCAATCTGATTCTTGAATCTAAAAAATCTCTGGGTAGAGAAGTTATCCCAATCTTCTATAAGACTGATCCATCCGATGTGCATCATCAGAGAGGTACCTTTGCTTGTGCCTTTCAGAAACATAGTCAGAGATTTTCTGAAAACAAAGAGAAGGTGCAAAGATGGAGAGAGGCCTTAAAAGAAGTTGTAAATATATCTGGCTATGACTCTACGGATCAGCATGAAGCAAAACTCATTGAAGAAATTATCGCAGCAGCATGGGCAAAGGTACAGCCAAAGTTACCATATTGTTTCAACAATGAGTTCATTGGCATTGAAACAAGAGTAGAAGAAGTGAGTGCACTTCTAAATATTGGATTATGTGATGTTGGCTTCATAGGAATATGGGGCATGACAGGTATTGGAAAGACAACTCTTGCAAGAGTTATCTATGAGAGAATATTTCATCAATTTGATGTTAGTTGTTTTCTTGCTAATGTAAAAGAAAACCATGAAGCCAAGGGATTCGTTTCGTTGCAAAGAAAACTTCTTTCCAAACTCATGATAAGAGACATAGATATTGATGATGCATATGAAGGGAAGAATATCACAAGGAATTTTTTATGCAGCAAAAAAGTTCTTGTTGTCTTGGATGATCAAGAAGATGTTGAAGAGTGTTGTAGATCAATGAAGGAATACAGCACAAGTAATAACAGTGAAATCCCTTCTCAACACTCTCTTTATGCTTATGGAAAGAGATCCCACCAAGTTGAAGAAGTGGCAGAAGAAGACAACATTGTGGCCACAGACGAAGCAGAAACATTTTCTGCTAAACGAAGAAAACTCTAA 1077 0.3853 MDVINQLGIGENNFVAVMDLKKKEKRIAPTSNEAKVATPINPACLTLKQEREEFRLALLASQQRRNNREEIQLAYVKEGEKKGFNLILESKKSLGREVIPIFYKTDPSDVHHQRGTFACAFQKHSQRFSENKEKVQRWREALKEVVNISGYDSTDQHEAKLIEEIIAAAWAKVQPKLPYCFNNEFIGIETRVEEVSALLNIGLCDVGFIGIWGMTGIGKTTLARVIYERIFHQFDVSCFLANVKENHEAKGFVSLQRKLLSKLMIRDIDIDDAYEGKNITRNFLCSKKVLVVLDDQEDVEECCRSMKEYSTSNNSEIPSQHSLYAYGKRSHQVEEVAEEDNIVATDEAETFSAKRRKL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1945 358 Gene3D - 80 174 IPR035897 -
Prci8g1945 358 Gene3D - 175 323 IPR027417 -
Prci8g1945 358 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 92 302 IPR044974 GO:0006952
Prci8g1945 358 Pfam NB-ARC domain 189 295 IPR002182 GO:0043531
Prci8g1945 358 SUPERFAMILY Toll/Interleukin receptor TIR domain 84 151 IPR035897 -
Prci8g1945 358 Pfam TIR domain 85 178 IPR000157 GO:0007165
Prci8g1945 358 PRINTS Disease resistance protein signature 283 297 - -
Prci8g1945 358 PRINTS Disease resistance protein signature 208 223 - -
Prci8g1945 358 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1945 Prci-Chr8 18134683 18156634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1945 87 301 WRKY Transcription Factor Family AT4G12020 33.184 8.75e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1945 - - pcin:129317417 687.952