Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1943 ATGGAAGTATCATGTTTTCCTGAGTTTCAGGGGAGCAGATACTCGCACAGGCTTCACAGACCACTTAAACAAAGAAGTATCGAAACTTTTATCGATGACGATGAGCTTGAGAGAGGAGAGATTATTTCTGACCAACTACTTCAAGCAATTGATAAATCTCTCATCTCCCTTGTGATTCTTTCTGAAAAATATGCTTCTTCACATTGGTGTTTGGATGAACTCCAAAGAATTCTTGAATCTAAAAAGTGTTTGGGGAGAGAAGTTATCCCAGTATTCTATAAACTAGATCCATCTCATGTAAGATATCAAGGAGGAGCCTTTGCACATGCATTTCAAAAACATGTTGAGAGATATGATCCTAAGAAGGTGCAAGGATGGAGAGATGCCTTAAAAGAAATTGCAGATATATCTGGCTATCACTCTTTAAATAGGCATGAATCAAAGCTCATCGAGGAAATTGTCACACAGGTTTGGACAAAATTACAACCTAGACAACCATATGACAAAAATGAATTTGTGGGTATTGAGTCAAAGATAGACAAACTGAGTTCAATTTTAAGGATAGGGTTGGATGATGTATGCTTGCTTGGAATATGGGGAATGGGCGGTCTAGGCAAAACATCTCTTGCAAGAGCTATTTATCAGAGGATTCAAAGCCAATTTGATGCCTCATACTTCTATGCCAATGTTCGGGAAATTTCTAAAAAGAAGGGATTGGTTCACTTGCAGAGAAAATTTCTTTCATGTTCTCTACAGCTGAGAAACAAGGAATTTGATCATATTGATGATGAATATGAAGGAAAGAACATGATAAAAAGATTTTTATGCAAACAGAAAGTTTTAATGGTATTGGATGACGTTAGTGAAATGAGCCAACTCGAATTCCTTGCAATAAAGAAAGATTGGCTAAGTCCAGGAAGCAGAGTAATAGTGACAACTAGGGATAAGCAACTATTGACAGCGCATGGAGAATTTGAAACATATGTGGCAGAATTTTTGAATGATGAGGAATCACTTCAACTTCTTTGTCAATGGGCTTTTAAAAGTGATCAACCACCAGTTGATTATTTGGAGTTGTCTAAAAGTGTAGTTGAACAAGCCGCAGGCCTTCCTTTGACACTTAAAGTGATGGGTTGTCATCTTTGTGGAAGAAATATGCTTGAGTGGAAAGATGTTTTGGGGAAAATGAAGCAAGTTCTACCAAATGACATTATAAATAGACTTCAAATAAGTTATGATTCATTAGATATTTTGGAGAAGAAAATATTTCTAGATGTTGCATGTTTCTTCAAAGAAAAGTTTAAAGATGAAATCATAGAAATATTAGAAATTTGTGGGTTTCATCCAATTATTGGAATCAAGACACTTGTTGAGAAATGCTTGCTAGTTGAAACAGATAGAGGGTGTTTGGGTATGCATGATATATTACAAGAAATGGGAAAAAGTATTGTTTTGGAAGAATCAATTGATGTTGGAAAACGTAGCAGGTTATGGTCAAAAGAGGATATTAATCATGTATTGACACATAATAAAGGCACAGACTCAATTGAAGTTATATATCTTGAATCTCTTGGGCAATGTGAAGCACGATGGGGTCCTAAAGCATTCTCAATGATGCATGCTCTTAGAATACTCATCATATCATGTGATGTGTACCTTCCCTTTGGACTCAAGTGTCTTCCAAGTTCACTAAGAATTCTTCGGTGGAAGAAATATCCATCGAAATCTTTTCCAGTGGATATTCATCCAATTGAACTTGTTGAACTCAAAATGCAATGCAGTAATACTGTACAACTTTGGAATGATACACTTGTAAGTATATGGTACAATAACTTCAAGCTTACCTTATATTAA 1854 0.3565 MEVSCFPEFQGSRYSHRLHRPLKQRSIETFIDDDELERGEIISDQLLQAIDKSLISLVILSEKYASSHWCLDELQRILESKKCLGREVIPVFYKLDPSHVRYQGGAFAHAFQKHVERYDPKKVQGWRDALKEIADISGYHSLNRHESKLIEEIVTQVWTKLQPRQPYDKNEFVGIESKIDKLSSILRIGLDDVCLLGIWGMGGLGKTSLARAIYQRIQSQFDASYFYANVREISKKKGLVHLQRKFLSCSLQLRNKEFDHIDDEYEGKNMIKRFLCKQKVLMVLDDVSEMSQLEFLAIKKDWLSPGSRVIVTTRDKQLLTAHGEFETYVAEFLNDEESLQLLCQWAFKSDQPPVDYLELSKSVVEQAAGLPLTLKVMGCHLCGRNMLEWKDVLGKMKQVLPNDIINRLQISYDSLDILEKKIFLDVACFFKEKFKDEIIEILEICGFHPIIGIKTLVEKCLLVETDRGCLGMHDILQEMGKSIVLEESIDVGKRSRLWSKEDINHVLTHNKGTDSIEVIYLESLGQCEARWGPKAFSMMHALRILIISCDVYLPFGLKCLPSSLRILRWKKYPSKSFPVDIHPIELVELKMQCSNTVQLWNDTLVSIWYNNFKLTLY 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1943 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 425 IPR027417 -
Prci8g1943 617 PRINTS Disease resistance protein signature 274 288 - -
Prci8g1943 617 PRINTS Disease resistance protein signature 367 381 - -
Prci8g1943 617 PRINTS Disease resistance protein signature 195 210 - -
Prci8g1943 617 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 139 IPR035897 -
Prci8g1943 617 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 607 IPR044974 GO:0006952
Prci8g1943 617 Pfam TIR domain 17 173 IPR000157 GO:0007165
Prci8g1943 617 Gene3D - 2 160 IPR035897 -
Prci8g1943 617 FunFam Disease resistance protein (TIR-NBS-LRR class) 2 163 - -
Prci8g1943 617 Pfam NB-ARC domain 179 400 IPR002182 GO:0043531
Prci8g1943 617 SMART till_3 2 136 IPR000157 GO:0007165
Prci8g1943 617 Gene3D - 332 416 IPR042197 -
Prci8g1943 617 Gene3D - 161 328 IPR027417 -
Prci8g1943 617 ProSiteProfiles TIR domain profile. 1 161 IPR000157 GO:0007165
Prci8g1943 617 SUPERFAMILY "Winged helix" DNA-binding domain 403 507 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1943 Prci-Chr8 18096238 18100219 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1943 47 614 WRKY Transcription Factor Family AT4G12020 30.382 1.44e-67 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1943 - - pcin:129317420 738.028