Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1922 ATGGCACTTGAAGCTCATGGAGTTGACTACCCTTCAAGCTCTTCTGGCTCAGCCAAGACATGGAAGTATCATGTGTTCTTGGGTTTTCGAGGAGCAGACACTCGTAAAAGCTTTACAGATCACTTGTATTGCACTTTACAACGCAAGGGAATGATAGCTTTCAGGGATGATGAAGAACTTGAGAGGGGACAAGTTATTAAACCAAGTCTATTCCAAGCAATTGAAGAATCTCTTTCTGCAATTGTTGTTCTCTCTCCAAACTATGCTTCTTCCTCCTGGTGCTTGGAAGAGCTCTCAAAGATTCTTCATTTTAAAAAAGAGTTGGGTCTTCATGTATTTCCAATCTTTTACGGTGTCGATCCGTCTGATATTCGACTTCAAAGAGGAAGTTTTGCAAAAGCATTTAAAAAGCATGAAGAAAAACTTCCACAAGATAAGATGAGGGTACAAAATTGGAGGGATGCTTTGAAAGAAGTTGCTGACTTATCTGGCTGGCATTCTATCAATTGGCATGAAACAAAACTCATTGAAGATATTATTGAAAAATTGTCGTCAAAAATATACAATGAACTTCCATTTGACTCTGAGAGATTAGTTGGAATTGAATCAAAACTTGCATGCTTAAATTCAATTATAGAAAATGGATTGGATGAAGTTCGATTTATAGGAATATGGGGCACTGGTGGTTTAGGTAAAACTACTCTTGCAAGAGCTTTCTATGAGAGAACGTATAAAGACTTTGAAATTCATTGCTTTTTGTGTAATGTTAGAGAGGTATATGAAAAAGGTGGTTTGATTGCCTTGGAGAAAAAGCTTCTTTCTTCTTTGTATAAAAAGGATGTGGATGACCATCATGAAGGAAGGATGTTGATAAAAAACATGTTAAGCAATAGGAAAATTCTTCTTATCCTTGATGATGTGAGTGATATAAGCCAACTTGAGAATTTGGCGGGAAATCAAGGATGGTTTGGGAAGGGGAGCTTAATAATAATAACAACAAGAGACAAGCATTTGTTATTATCACATGGTGTATCTACTTGGTATAACATCAAATTCTTGAGTGATGATGAATCCCTTGAACTTTTCCATCAAATTGCTTTTAAAGGAAGTAAGCCAAGTGAAGATTTTTTGGAGCTTTCTAAAACTGTGATTCACTATGCAAGCGGCCTTCCTTTGGCGCTCAAAGTGTTGGGTTCATTTCTTTGCGGAAGAAATACATTAGAATGGAGAGATGCAATAGCTAAATTTAAGAAAGTTCCTCCGAATGACATCTTGAAGATACTTAAAGTTAGTTTTGATGGATTGGAAGATGATGAGATCAAAACTATATTTTTAGATATTGCTTGCTTTTTTAAGGGGATGAACAAAGATTATGTCATGCAAATCTTACAAAAATTAGATTTACATCCAATAATTGGAATAAAAGTTCTGGTTGATAAATCTTTGATAATTATTGATCATCTTCACAATACTTTATGGGTTCATGACATGCTTGGGGAAATGGCTAAGAACATTGTTGTTCAACAATCATCCCATGATGTTGGCAAACGTAATAGGATATGTTCATTGGAGGATGCTAATCATGTTCTAGAAAGCAATACGGGGACAGAAGCAATTCGAGGCATCGTGTTAAGATTAGACAAACCATGTGTCTCCAATTGGGATCCTAAAGCCTTCATAAAGATGAGTAATCTCAGATTACTTATCATAAAAAGTGGTTGGCAACGGCATGCTGATCCGGCTGGTTATTTGAATCTTCCTCGTGGGCTTAAATTCTTTCCAAGTACATTAAAAGTGTTAGAATGGAAGCGATGCTGTTTAGGTACTTTCCCAGGTCAAGTTCTTAAACAACCACAGGTTTTAGGAAAGCTTAAGCACCTTGATTTAAGCCATTCAAAATATCTAATCAAAACACCAAATTTTGATGAAATCCCTGATCTTGAAATAGTCATTCTTGAAGGTTGTGTAAACCTTGTTGAAGTCCATTCATCTCTTGGATGCCATAAGAATCTTGCCACACTCAATTTGAGGGGTTGTAAGAGTATTGAAACTCTACCAAGAAAGTTAGAGATGAAATGCCTAAAGACTCTTGTACTCTCAGGCTGTTCAAAAATCAAACGACTTCCTGAATTTGGGAAAAGCATGGAGTGTCTATCCCAACTTGATGTGGAGGAGACTGGTATCACAAAACTACCTCAATCACTTGTCAATTTGACTACTCTTGCTGTTTTAAATCTTATGGATTGCAAAAGTCTGGTATACCTTCCCAATGTGATTCAATATATGAAGTCTATTAGAATTCTCAATTTTTCTGGTTGCTCAAAACTTTCAAGTCTTCTAGAGGTTTCGACTGAAAATGTGACTTTAGAAGCGCTTGATGCTAGTGGAACTGCTATCAAGGAAGTGCCTTCCTCAATTTGTCAGTTGACAAATTTGAAATCACTATCTTTTAGTGGATGCACTGGACAAGAACAATCATCCTCACAAAATTTCTTTTCCAATTTTAGTTGGTTCCCTAGGATTACAAGGCCTTCAATATCCACTGGGTTATTGCTGCCCGCTTCTTTACCAAGTTTATCATCATTAACAAACTTAGATTTAAGTTATTGCAATCTCTGTGATGAGTCCCTTCCTAATGATTTTAATGCATTGTCATCGTTGGAGGTGCTTGATCTACGTGGAAACAATTTTGTTAACCTACCTAGTGGCTTTATCTCTAATCTTTTAAGTCTCTGGGGCGTTTTCTTAAGTCATTGTCCAAGGCTTCAGTCATTGCCACGACTTCCACCAAATATATGTAAGACAGATGCGGCTGATTGTCCTTTAGTGACACCTAAACTTGGTCTACAACAGCTGTGGGAATTGCTTGAACAATTTGAAGATAAGGATGGCTTCATGTCAAAATGGTGGTTCTTTTTACAGATTCCAGGAAGTGAAGTGCCATCATGGTTTTATAATCAAAATTACTTCCATGACAAGACTTCTCGTTTTAAATCAAATGTGTCATTGATAGCGGATATAGATGATCAATGCCTTTCAAGTAAATGGTGTGGAATAGCTGTATGCTTAGTTGTAGAAAGACGTCATTATCCACCTCTTAAAAATTGTTATATTGAAGTATTGGTTTGGGAATGTGAATTTCCTTGGCGGTGTGGGAAGCTTATTTTGAGTTTCGGCATAACAGCCAACTCATTTTATTATTCATTCCATGCTTTGATAAGGGAAAACATCAATTTTCTTTTAATGTTGGAGATCGGCTAA 3261 0.3655 MALEAHGVDYPSSSSGSAKTWKYHVFLGFRGADTRKSFTDHLYCTLQRKGMIAFRDDEELERGQVIKPSLFQAIEESLSAIVVLSPNYASSSWCLEELSKILHFKKELGLHVFPIFYGVDPSDIRLQRGSFAKAFKKHEEKLPQDKMRVQNWRDALKEVADLSGWHSINWHETKLIEDIIEKLSSKIYNELPFDSERLVGIESKLACLNSIIENGLDEVRFIGIWGTGGLGKTTLARAFYERTYKDFEIHCFLCNVREVYEKGGLIALEKKLLSSLYKKDVDDHHEGRMLIKNMLSNRKILLILDDVSDISQLENLAGNQGWFGKGSLIIITTRDKHLLLSHGVSTWYNIKFLSDDESLELFHQIAFKGSKPSEDFLELSKTVIHYASGLPLALKVLGSFLCGRNTLEWRDAIAKFKKVPPNDILKILKVSFDGLEDDEIKTIFLDIACFFKGMNKDYVMQILQKLDLHPIIGIKVLVDKSLIIIDHLHNTLWVHDMLGEMAKNIVVQQSSHDVGKRNRICSLEDANHVLESNTGTEAIRGIVLRLDKPCVSNWDPKAFIKMSNLRLLIIKSGWQRHADPAGYLNLPRGLKFFPSTLKVLEWKRCCLGTFPGQVLKQPQVLGKLKHLDLSHSKYLIKTPNFDEIPDLEIVILEGCVNLVEVHSSLGCHKNLATLNLRGCKSIETLPRKLEMKCLKTLVLSGCSKIKRLPEFGKSMECLSQLDVEETGITKLPQSLVNLTTLAVLNLMDCKSLVYLPNVIQYMKSIRILNFSGCSKLSSLLEVSTENVTLEALDASGTAIKEVPSSICQLTNLKSLSFSGCTGQEQSSSQNFFSNFSWFPRITRPSISTGLLLPASLPSLSSLTNLDLSYCNLCDESLPNDFNALSSLEVLDLRGNNFVNLPSGFISNLLSLWGVFLSHCPRLQSLPRLPPNICKTDAADCPLVTPKLGLQQLWELLEQFEDKDGFMSKWWFFLQIPGSEVPSWFYNQNYFHDKTSRFKSNVSLIADIDDQCLSSKWCGIAVCLVVERRHYPPLKNCYIEVLVWECEFPWRCGKLILSFGITANSFYYSFHALIRENINFLLMLEIG 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1922 1086 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Prci8g1922 1086 Gene3D - 187 345 IPR027417 -
Prci8g1922 1086 Gene3D - 15 186 IPR035897 -
Prci8g1922 1086 SMART LRR_typ_2 715 738 IPR003591 -
Prci8g1922 1086 SMART LRR_typ_2 884 907 IPR003591 -
Prci8g1922 1086 SMART LRR_typ_2 859 883 IPR003591 -
Prci8g1922 1086 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Prci8g1922 1086 SUPERFAMILY L domain-like 542 945 - -
Prci8g1922 1086 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 165 IPR035897 -
Prci8g1922 1086 Pfam NB-ARC domain 217 418 IPR002182 GO:0043531
Prci8g1922 1086 SUPERFAMILY "Winged helix" DNA-binding domain 423 530 IPR036390 -
Prci8g1922 1086 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 447 IPR027417 -
Prci8g1922 1086 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 711 IPR044974 GO:0006952
Prci8g1922 1086 SMART till_3 22 162 IPR000157 GO:0007165
Prci8g1922 1086 Pfam TIR domain 22 189 IPR000157 GO:0007165
Prci8g1922 1086 PRINTS Disease resistance protein signature 387 401 - -
Prci8g1922 1086 PRINTS Disease resistance protein signature 619 635 - -
Prci8g1922 1086 PRINTS Disease resistance protein signature 294 308 - -
Prci8g1922 1086 PRINTS Disease resistance protein signature 221 236 - -
Prci8g1922 1086 FunFam Disease resistance protein (TIR-NBS-LRR class) 354 436 - -
Prci8g1922 1086 Gene3D - 352 436 IPR042197 -
Prci8g1922 1086 Gene3D Ribonuclease Inhibitor 714 941 IPR032675 -
Prci8g1922 1086 Gene3D Ribonuclease Inhibitor 542 713 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1922 Prci-Chr8 17597018 17602100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1922 7 854 WRKY Transcription Factor Family AT4G12020 29.091 1.16e-86 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1922 - - pcin:129299341 1152.12