Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1921 ATGGCACTTGATTTTAATGGAGTTCGGTGTTCTTCAAGCTCTTACGGATCAACTATGAGCCGGAAATATGATGTGTTTTTGAGTTTTCATGGTGAAGATACTCGCACAGGCTTTACTGATCATTTACATGATAATTTAAAACGCAAAGGATTAAGAATTTTTAGGGATGAAGAAGGACTTGAAAGGGGAGAATATATCAAGACAAGTTTACTACAAGCAATTGAAGAATCTCGTTCTGCAATTGTTGTGCTCTCCTCAAGATATGCTTTTTCACCATGGTGTTTGGATGAGCTCCAAAAGATTCTTCATTCTAAAGAAGAGTTGAGTCTTCAAGTATTTCCAATCTTTTATCATGTAAATCCATCTCGTGTTAGAAAACAAGAGGGAAGTTTCGAAGAAGCATTTATGGATCATGAAAAAAATTTTACTCAAGACAAAATGAAGGTTCAAAAATGGAGGCATGCTTTAGAAGAAGTTGCTAGCTTATCTGGTTGGCACTTACCGGAACGGAGATCTGAAACAGAATTCATTGAAGGATTTGCTAAAGAAATTATGCCTAAGTTACATGATGAATCGCCATTTGACCTTGGTGGATTAGTTGGAATTGAATCAAAATTAAAAGAGTTGGAATCAATCATAGAAAGTGAGTCAAAAGGAGTTCGATCTATAGGAATATGGGGAACAGGAGGCTTAGGCAAAACTGCTCTTGCTCGAGCTTTTTATGATCGGAAGTGTAAAGATTTTGAGGTTTGTTGCTTTCTTCATAATGTCAGAGAGACAAACGAAAAAGGTGATTTGATTTTGTTGCAAAGAAAACTTATTTCTTCTTTGAATAAAAGCAGTTTGGAAGTGGATGATTGTCATCAAGGAATGAATTTGATAAAAAAAATGTTAAAGGATAGAAAAATTCTATTAGTCCTTGATGATGTGAGTGATATAGGCCAACTTGAATATTTGGCTAGAGAGCAAGGATGGTTTGGCAATGGGAGTAGAATAATAATAACAACAAGAGATAGGCATTTGTTATCATCGTATAGTGTATCTACTCAACACAACATCAAATTCTTGAGTGATGACGAGTCCTTTGATCTTTTCTATCAACATGCTTTTAAAGGAAAAAATCAACCAACTGAAGATTACTTGGAGGTTTCTAAAAGTGTGATGGAATATGCTGGAGGCCTTCCTTTGGCTCTTAAAGTGTTGGGTTCTTTTCTTTGTGGAAGAACTATAGAGAAATGGAAGGATGCACTAGCTAAGTTGAAGAAGGTTCCTCATGATCACATTTTGAAGATACTTAAGGTTAGTTTTGATGGATTAGATGAAAAGGAGAAGACTATATTCTTGGATATTGTTTGCTTTTTTAATGGGATGGCCATAGGCCGTGTCATTCAAATTTTAGAAACTTTGGATGAGGATCTTCACCCAAAAATTGGAATAGATGTTCTTATTGACAAATCATTGGTAATTAATTCTGAAGGGCATTTGTGGGTGCATGATACGTTTCAAGATATGGGTAATTATAGTGTTTCTGAAGAGTCACTTGATGATGTTGGCAAGCGTTCTAGGATATTTTCTTTGAAGGCTGCCGATTATATCCTAAAAAGAAATAAGGGGACAGGAGCAATTCGGGGTATAGTTCTAACACTAGAAAAATCATTTGAAGCTTTTTGGGATCCCGAAGCCTTATCAAAGATGAGTAATCTCAAGTTACTTATCATTTCAAGTGGCTCATCACATGTTTCTGACTGTCAATTGAAACTTCCTCGCGGACTCAAGTCCCTTTCCAATGAGTTGAGAATTATTGAATGGGAGGGATATCCTTTAGATTCTTTGCCAAGACGAACTCAACTTGATGAACTTGTTCATCTGAAAATGCAGCATAGCAAGTTAAAAGAACTTTGGAGAGAAACGCAGGTTTTAGGAAGGCTTAAGTACCTTGATTTAAGAGATTCAAGAGATCTAATCAAAGCACCAAATTTTGATGAAATCCCTGATCTTGAAATACTCATTCTTGAAGGTTGTGTAAACCTTGTTGAAGTACATTCATCTCTTGGACGCCATAAGAATCTTGCCAGGGCCAATTTGAAGGGTTGTAGGATTATTAAAATTCTACCAAGTAAGTTTGAGATGAAATGGCTACAGACTCTTATACTCTTAGGCTGTTCAAAAATCAAACGACTTCCAGAATTTGGGGAAAGCATGAAATGTCTATACCAACTTGATGTGGAAGAGACTAGCATCACAAAACTACCTCAATCACTTGTCAATTTGACTACTCATGCTGTTTTAAATCTTAGGAATTGTGTAAACCTTGTTGAAGTACATCCATCACTTGGACACCATAAGAATCTTGCCACAATCAATTTAAAGGGATGCAAGAGTATTAAAATTCTACCAAGTAAGTTAGAGATGAAATGCCTGGAGACTCTTATACTCTCAAGCTGTTCAAAAATCAAACGACTTCTTGAATTTGGGGAAAGCATGGAGTGTCTATCCCAACTTGATGTGGAGGAGACTGGTATCACAAAACTACCTCAATCACTTGTCAATTTAACTACTCTTGCTGTTTTAAATCTTAGGAATTGCAAAAGTTTGGTATGCCTTCCCAATGTGATTCAATATATGAAGTCCATTAGAATTCTCAATTTTTCTGGTTGCTCAAAACTTTCAAGTCTTCCAGAGGTTTGGAATGAAAATGTGGCTTTAGAAGAGCTTGATGCTAGTGGAACTGCTATAAAGGAAGTGCCTTCATCAATTTGTCAGGTAAAAAATTTGAAATCATTATCTTTTAGTGGATGCACTGGACAAGAACAATCATCCTTGCAAAATTTCTTTTGTAATTTCAGCTGGTTCTCTAGGATTACAAGGCCTTCAATATCCACTGGGTTATTGCTGCCCGCTTCTTTACCAAGTTTATCATCATTAACAAACTTAGATTTTAGTTATTGCAATCTCTGTGATGAGTCCCTTCCTAATGATTTTAATGCATTGTCATCGTTGGAGCTGCTTGATCTGAGTGGAAACAATTTTGTTAGCCTACCTAGTGGCTTTATCTCTAACCTTTTAAAGCTCAACTGGGTTATCATCAATCATTGTCCAAGGCTTCAGTCATTGCCACGACTTCCACCAAATATATCTTGTACAGATACAGGAAGTGAAATGCCATCATGGTTTTACAATCAAAATTACTTCTATGAAAAGGCTTGGTGGTTCAAACCAAATGTGTCAATTATAGCGGATATAGATGATCAATGCCTTTCAAGTAAATGTTGTGGAATAGCTGTATGCTTAGTTGTAGAAGGACGTGGTTTTTCATCTACTACTATTGAAAATGAAGGACCAGTGTTGTTTTGGAGTCTTATATTTCCTTACTGGCCGAGCGGGTTCACTTGGTTTGGGCTTTGGCGTAATAGCCAACTCATTTTATTATTTATTCCATGCTTTGATAAGGGAAAACATCAAATTTCTTTTCATGTTGGAGAACGGGCAGAAATAAGAAGTGTGGGTGGCGTGTGGTGTGTAAAGAAGATGTTGAAGCATTACGAAGAACAATGGGTGGAGGATGCAGTAGCAGCAATGATTCAGACGACTGCCACACTTTTAATGATGATGATGTGGACACCCAAACACCTCTTGCTAAACGCCAAAAATTGGAATAAATGGTTCCAGGTTTTTTCTTTGCGAGGATTCTTTGTGATTGAATGGTTCTTGAAGTTGGTTCCTGCCAGCTTGCTCTTTTGGCTAGAGTTAGAGCTCGTTTTTTGCTGTTGGAAGTCGACCAAAATCTCTTCCTTCTCCCTTTTACGAGCTCAGCATTTCACTGGGTTGAGGTATAGATTATGGGATCATTTTGCTTGTGCTGCTGTCGAGTTTTATTTCTATTGTGCTCTTGGTTATGATGCTTCTTCTCTCTACTCGATTTTGGCTGCTACTCTGTTCCTTAAACGCAGGAGAGCTATTCCTACCGCATCCCCAAACAAGAAATTCGGTTTATTTGCTTCACCAGGTCCGAAAATGCCAAGAAGCCAATCCAAAAACAATCTTCCAATTCTCATCCCTGGATGTCAAGTAGATTTAAAGTCTGAGTCGTGCTAA 4095 0.3722 MALDFNGVRCSSSSYGSTMSRKYDVFLSFHGEDTRTGFTDHLHDNLKRKGLRIFRDEEGLERGEYIKTSLLQAIEESRSAIVVLSSRYAFSPWCLDELQKILHSKEELSLQVFPIFYHVNPSRVRKQEGSFEEAFMDHEKNFTQDKMKVQKWRHALEEVASLSGWHLPERRSETEFIEGFAKEIMPKLHDESPFDLGGLVGIESKLKELESIIESESKGVRSIGIWGTGGLGKTALARAFYDRKCKDFEVCCFLHNVRETNEKGDLILLQRKLISSLNKSSLEVDDCHQGMNLIKKMLKDRKILLVLDDVSDIGQLEYLAREQGWFGNGSRIIITTRDRHLLSSYSVSTQHNIKFLSDDESFDLFYQHAFKGKNQPTEDYLEVSKSVMEYAGGLPLALKVLGSFLCGRTIEKWKDALAKLKKVPHDHILKILKVSFDGLDEKEKTIFLDIVCFFNGMAIGRVIQILETLDEDLHPKIGIDVLIDKSLVINSEGHLWVHDTFQDMGNYSVSEESLDDVGKRSRIFSLKAADYILKRNKGTGAIRGIVLTLEKSFEAFWDPEALSKMSNLKLLIISSGSSHVSDCQLKLPRGLKSLSNELRIIEWEGYPLDSLPRRTQLDELVHLKMQHSKLKELWRETQVLGRLKYLDLRDSRDLIKAPNFDEIPDLEILILEGCVNLVEVHSSLGRHKNLARANLKGCRIIKILPSKFEMKWLQTLILLGCSKIKRLPEFGESMKCLYQLDVEETSITKLPQSLVNLTTHAVLNLRNCVNLVEVHPSLGHHKNLATINLKGCKSIKILPSKLEMKCLETLILSSCSKIKRLLEFGESMECLSQLDVEETGITKLPQSLVNLTTLAVLNLRNCKSLVCLPNVIQYMKSIRILNFSGCSKLSSLPEVWNENVALEELDASGTAIKEVPSSICQVKNLKSLSFSGCTGQEQSSLQNFFCNFSWFSRITRPSISTGLLLPASLPSLSSLTNLDFSYCNLCDESLPNDFNALSSLELLDLSGNNFVSLPSGFISNLLKLNWVIINHCPRLQSLPRLPPNISCTDTGSEMPSWFYNQNYFYEKAWWFKPNVSIIADIDDQCLSSKCCGIAVCLVVEGRGFSSTTIENEGPVLFWSLIFPYWPSGFTWFGLWRNSQLILLFIPCFDKGKHQISFHVGERAEIRSVGGVWCVKKMLKHYEEQWVEDAVAAMIQTTATLLMMMMWTPKHLLLNAKNWNKWFQVFSLRGFFVIEWFLKLVPASLLFWLELELVFCCWKSTKISSFSLLRAQHFTGLRYRLWDHFACAAVEFYFYCALGYDASSLYSILAATLFLKRRRAIPTASPNKKFGLFASPGPKMPRSQSKNNLPILIPGCQVDLKSESC 1364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1921 1364 Pfam NB-ARC domain 212 426 IPR002182 GO:0043531
Prci8g1921 1364 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 190 - -
Prci8g1921 1364 Gene3D - 17 189 IPR035897 -
Prci8g1921 1364 Gene3D Ribonuclease Inhibitor 550 709 IPR032675 -
Prci8g1921 1364 Gene3D Ribonuclease Inhibitor 826 1052 IPR032675 -
Prci8g1921 1364 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 729 IPR044974 GO:0006952
Prci8g1921 1364 SUPERFAMILY L domain-like 831 1039 - -
Prci8g1921 1364 SMART till_3 22 162 IPR000157 GO:0007165
Prci8g1921 1364 Gene3D - 190 354 IPR027417 -
Prci8g1921 1364 SUPERFAMILY L domain-like 555 893 - -
Prci8g1921 1364 SUPERFAMILY "Winged helix" DNA-binding domain 427 513 IPR036390 -
Prci8g1921 1364 Pfam TIR domain 22 193 IPR000157 GO:0007165
Prci8g1921 1364 PRINTS Disease resistance protein signature 222 237 - -
Prci8g1921 1364 PRINTS Disease resistance protein signature 297 311 - -
Prci8g1921 1364 PRINTS Disease resistance protein signature 391 405 - -
Prci8g1921 1364 PRINTS Disease resistance protein signature 849 865 - -
Prci8g1921 1364 Gene3D Ribonuclease Inhibitor 710 825 IPR032675 -
Prci8g1921 1364 ProSiteProfiles TIR domain profile. 21 188 IPR000157 GO:0007165
Prci8g1921 1364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 450 IPR027417 -
Prci8g1921 1364 Gene3D - 355 440 IPR042197 -
Prci8g1921 1364 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 165 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1921 Prci-Chr8 17529712 17544878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1921 747 930 WRKY Transcription Factor Family AT4G12020 35.326 2.34e-18 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1921 - - pcin:129317408 2725.27