Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1912 ATGAAGCATGAAGAAAGATTTACACAAGACAAAATGAAGGTGCACAGATGGAGGCATGTTTTAGAAGAAATTGCTAGCTTATCTGGTTGGAACTCACGGAATAGGCATGAAGCAGAATTCATTGAAAGCATTGCAAAAGAGGTGAAGTCGAAGTTGCATGATGAATCGCCATTTAATCTTGGTGCATTAGTTGAAATTGAATCAAAATTAGATGAGTTGAAATCACTCATAGCAACTGTTTCAGAAGGAGTTCCATCTCTAGGAATATGGGGAACAGGAGGCTTAGGCAAAACTACTCTTGCTGGAGCTTTTCATGATTGGAAGTGCAAGGATCTTGAGGGCAGGATAGTAGAACAAGATGATAACAGCCCCACCAAAGCCACTTGCTTGAACACTGAGTTGGTTGATCAACAAAATTATGATAATGCTGCTAATTCAATCGCTTCTACAACCAACTTTACCCAAAGGGAAACACAGGATCCTATTGGCCCTGTTTCTTCTGTGAACACTGAGTTGGTTGACCAACAGAATTATGATAATGTTCCTCATTCAATCTCTTCTACGTTTAATTTTAGCGAATGGGAAATATCGGATCACCTTATAGGGCATGGTGGATTTGCATTTGTTCATGTTGCCCGTAACAGAGAAACCAGAGAATCATGTGCAGTAAAGACACTTAAAGACCCTGGCAAAAGGTCTCTAGAAAAGGAAATCAGGATTCTCAGCCAACTAGACCATCAAAACATAGTAAAGTATTATGGCAGTGAAAGAGTTGGAAACCAGATACATCTATACATGGAATACGTGGAAACTGGTACACTGACGGATTACATTCGTGGACGCGTTCGTTTCCATGAACCTTTAGTTCGAGATGAAACTGGACAAATTCTCTCTGCATTGGCTTACTTAAATGGCAAAAGACTAGTCCACAGGGATATCAAACCCGATAACATGCTTGTTGATTCTCACGGCTTTGTAAAGCTTATTGACTTTGGTTTGGCTAAGCATGTAGACGAATCTGTGGGCAATCACTCCGCTGGGGGGGTAACTCCACATTATGCAGCTCCAGAGACTCTTCAAAACCAAGAATACAGCAGCTTGAGTGAAGCTTATGCCGCTGATATATGGAGCCTTGGCTGTGTAATCATTGAAATGTTCACAGGGAAGCGTCCTTGGTGTGATCTTGAAGGGTGCCAGGTGATCCATGAAGTATGTTTGAACAAGCGAGATCCTGAAATACCAGAAGATTTGTCGACAGAGGGCAGAGTTTCTCGAATTATGCTTCCAGAGAAATCCAGCTGA 1302 0.4163 MKHEERFTQDKMKVHRWRHVLEEIASLSGWNSRNRHEAEFIESIAKEVKSKLHDESPFNLGALVEIESKLDELKSLIATVSEGVPSLGIWGTGGLGKTTLAGAFHDWKCKDLEGRIVEQDDNSPTKATCLNTELVDQQNYDNAANSIASTTNFTQRETQDPIGPVSSVNTELVDQQNYDNVPHSISSTFNFSEWEISDHLIGHGGFAFVHVARNRETRESCAVKTLKDPGKRSLEKEIRILSQLDHQNIVKYYGSERVGNQIHLYMEYVETGTLTDYIRGRVRFHEPLVRDETGQILSALAYLNGKRLVHRDIKPDNMLVDSHGFVKLIDFGLAKHVDESVGNHSAGGVTPHYAAPETLQNQEYSSLSEAYAADIWSLGCVIIEMFTGKRPWCDLEGCQVIHEVCLNKRDPEIPEDLSTEGRVSRIMLPEKSS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1912 433 ProSiteProfiles Protein kinase domain profile. 195 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1912 433 SMART serkin_6 195 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1912 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Prci8g1912 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 117 IPR027417 -
Prci8g1912 433 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 149 422 - -
Prci8g1912 433 ProSitePatterns Protein kinases ATP-binding region signature. 201 224 IPR017441 GO:0005524
Prci8g1912 433 Gene3D - 50 177 IPR027417 -
Prci8g1912 433 Pfam Protein kinase domain 199 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1912 433 Gene3D - 1 49 IPR035897 -
Prci8g1912 433 Gene3D Transferase(Phosphotransferase) domain 1 190 428 - -
Prci8g1912 433 SUPERFAMILY Protein kinase-like (PK-like) 198 420 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1912 Prci-Chr8 17434772 17441326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1912 161 422 MAP Kinase Kinase Kinase AT5G66850 42.491 1.47e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci8g1912 Pkinase 1.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1912 - - pcin:129285400 458.373