Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1909 ATGGATGTGGATGACTATTATGAAGGAAGGAAGTTGATAAAAAGCATGTTAAGCAATAGGAAAATGCTTCTTGTCCTTGATGATGTGAGTGATATAAGCCAACTTGAAAATTTGGCTGGCAATCAAGGATGGTTTGGCAAAGGGACCTTAATAATAATAACAACTAGAGACAAGCATTTGTTATTATCACATGGTGTATCTACTTGTTATGACATCAAATTCTTGACTGATGATGAATCTCTTGAACTTTTCCATCAAAATGCTTTTAAAGGAAGTAAGCCAAGTAAAGCTTTTTTGGAGCTTTCTAGAACTGTGATTCAATATGCTAGTGGCCTTCCTTTGGCACTCAAAGTGTTGGGTTCTTTTTTTTGTGGAAGAACTATAGAGAAATGGAAGGATGCGCTTGCTAAGTTGAAGAAGGTTCCTCCAAATAACATTTTGAAGATACTTAAGGTGAGTTTTGATGAATTAGATCATTGGGAAAAGACTATATTCTTGGATATTGCTTGCTTTTTCAATGGGATGGCCAAAGGCCCTCTCATTCAAATTTTAGAAATTTTGGATGAGGATCTTCACCCAACAATTGGAATAGATGTTCTTATTGACAAATCACTGGTAATCAATTCAGAAGGGTATTTGTGGGTGCACCAGACACTTCGAGATATGGGTAAATATATAGTCTCTCAAGCATCACTTAATGATGCTGGCAAGCGTTCTAGGATATTGTCTTTGAAGGATGCCAATGATGTATTAGAAGGAAATAAGGGCACAGGAGCAATTCGGGGTATAGCCATAATAGTAGAAGAAACATTTAATGCACTTTGGAATCCTGACGCCTTCTCAAGGATGATCAATCTCAAATTACTTGTCATTTCAGGCCGCTCACATATTTCTCATTGTCAATTGAATCTTTCATGTGGAATTAAGTCCCTTCCCATTGGGCTGAAAGTCTTAGCATGGGATGGGTATCCTTTAGATTCTTTGCCCAATCAAACAAAACTCCATGAACTTCTTGTTCTAAAAATGCAACATAGCAAGTTAAAAGAACTTTGGAGGGGAGCACGGTCTCTGCCAAGGTTGAAGTCCATTGATTTATCTCATTCAAAATTCCTCATCAAAACTCCAGATTTTTATAAAATTCCTAATCTTGAGATATTGATTCTAGAAGGGTGTTCTAAACTGGTTGAAGTTCACCAGTCTCTTGGGCAACATAAGAATCTTGTTATTGTTAATTTGAAAGGCTGCAAAAAAGTTAGAACCCTTCCAAGTAAATTTGAGATGGATCGCTTAAAGATTTTTGTTCTATCTGGTTGTTCAAAAATTAGAAAACTTCCTAAGTTTGAAAAGGATATGAAATGTCTCTCTACACTTGATTTAGAGAACACTGCTATATCCAAACTACCTGAATCATTGGGCAATTTGATTGGTCTTGTTGAATTAAATTTGACGGGTTGCACAAATCTTGTTTGCCCTCCAAATAATGTTCATAAATTCATAGCCAGGAAGATTATCAAAATTTCTGGTTGGTCTAACCCTTCAAGGATGCCAGAGGATTTGAATGAAAATGGGGCTTTGGAAGTGCTTGATGTGGGTCGAATTTCTTCATCATCATGGAGTTGTGTGTCCCTTCTCAGGAAGTCATTTGGGCTTCAAAGGCCTTTAAGCTCAACAAATTTTATGGTACCCATTTCTTTATCATTCTTGAGCCAATTAAATTTAGGTTATTGCAAACTTCATGATGGATCACTTCCAGATGACATAAGCATGTTATCATCATTGACACATTTAATTTTAAGTGGAAACAATTTCATTGACTTACCATCTCGCCTCATTTCCAATCTTTCCAAGCTTCTATTTGTTGATATTGTTAATTGCCCTACGTTTCGGTCCTTGCCACAACTTCCGTCAAATCTATCAACCATTCTCGCAAGCGGTTGTCCATCAATGGAGCATTACATGTGTTCGCAGAAACTATGGGAGTTCATTGAATCATTCCAATCTCAGGTTATCAATTTCAGCGACGGCTTTATAGCTTGTTATGAAGAACATAAACCTGTCATTTTATTTCAGGAGTATGGAATCCTTACACAAGATTTACAAATTCCTGACTGCTTCAAGCAATATAGTCGTGTATTGACAATTCAAGGTAGTGAAGTGCCACCATGGTTTCATAATCAACACTATTTTTGTGAGAAAGAAATCAGTGATCCAAATGTGTCATTCGCAGCAAGCATACCTGAATATTGTCATTCAAGTGAATGGTGGGGCATAGCCACATGCTTAGTGTTGGAAAACGATTTAGCATCTGCACACCTTGACTTGGAGCACCCTGAGAATATGTTTGATGATGTTTGGTGGACTTACAGATTGCCTAATGAAAAATTTCAAGAAATTCACTGTGGCTATCGTTTGTGTGTACAAACAAATTGTAGTCATCAACTCTGTGTTATCTATGCTTGTGGTTCCTCTTTGGCTGCAAACCAACTTCAAATGGTATTTTTGGTAACTAAGACATCAAAGTTTAAAATAAGGAAGTGTGGGTGGCGTTTACTGTGTAAAGAAGATGTTGAAACTTGGCGAACAACAAGGGAAGAAGGATGTAACAGCAGCAATGCCAAAATTTTGGAATAA 2631 0.3702 MDVDDYYEGRKLIKSMLSNRKMLLVLDDVSDISQLENLAGNQGWFGKGTLIIITTRDKHLLLSHGVSTCYDIKFLTDDESLELFHQNAFKGSKPSKAFLELSRTVIQYASGLPLALKVLGSFFCGRTIEKWKDALAKLKKVPPNNILKILKVSFDELDHWEKTIFLDIACFFNGMAKGPLIQILEILDEDLHPTIGIDVLIDKSLVINSEGYLWVHQTLRDMGKYIVSQASLNDAGKRSRILSLKDANDVLEGNKGTGAIRGIAIIVEETFNALWNPDAFSRMINLKLLVISGRSHISHCQLNLSCGIKSLPIGLKVLAWDGYPLDSLPNQTKLHELLVLKMQHSKLKELWRGARSLPRLKSIDLSHSKFLIKTPDFYKIPNLEILILEGCSKLVEVHQSLGQHKNLVIVNLKGCKKVRTLPSKFEMDRLKIFVLSGCSKIRKLPKFEKDMKCLSTLDLENTAISKLPESLGNLIGLVELNLTGCTNLVCPPNNVHKFIARKIIKISGWSNPSRMPEDLNENGALEVLDVGRISSSSWSCVSLLRKSFGLQRPLSSTNFMVPISLSFLSQLNLGYCKLHDGSLPDDISMLSSLTHLILSGNNFIDLPSRLISNLSKLLFVDIVNCPTFRSLPQLPSNLSTILASGCPSMEHYMCSQKLWEFIESFQSQVINFSDGFIACYEEHKPVILFQEYGILTQDLQIPDCFKQYSRVLTIQGSEVPPWFHNQHYFCEKEISDPNVSFAASIPEYCHSSEWWGIATCLVLENDLASAHLDLEHPENMFDDVWWTYRLPNEKFQEIHCGYRLCVQTNCSHQLCVIYACGSSLAANQLQMVFLVTKTSKFKIRKCGWRLLCKEDVETWRTTREEGCNSSNAKILE 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1909 876 PRINTS Disease resistance protein signature 16 30 - -
Prci8g1909 876 PRINTS Disease resistance protein signature 109 123 - -
Prci8g1909 876 PRINTS Disease resistance protein signature 355 371 - -
Prci8g1909 876 FunFam Disease resistance protein (TIR-NBS-LRR class) 76 158 - -
Prci8g1909 876 Gene3D - 74 158 IPR042197 -
Prci8g1909 876 Pfam NB-ARC domain 12 146 IPR002182 GO:0043531
Prci8g1909 876 SUPERFAMILY L domain-like 273 653 - -
Prci8g1909 876 SMART LRR_typ_2 334 357 IPR003591 -
Prci8g1909 876 SMART LRR_typ_2 451 474 IPR003591 -
Prci8g1909 876 SMART LRR_typ_2 590 613 IPR003591 -
Prci8g1909 876 Gene3D Ribonuclease Inhibitor 444 670 IPR032675 -
Prci8g1909 876 Gene3D Ribonuclease Inhibitor 270 443 IPR032675 -
Prci8g1909 876 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 488 IPR044974 GO:0006952
Prci8g1909 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 168 IPR027417 -
Prci8g1909 876 Gene3D - 2 67 IPR027417 -
Prci8g1909 876 SUPERFAMILY "Winged helix" DNA-binding domain 145 251 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1909 Prci-Chr8 17380845 17383925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1909 12 650 WRKY Transcription Factor Family AT5G45050 30.945 2.60e-63 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1909 - - pcin:129317405 1766.9