Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1908 ATGGCACTTGATGTTAATGGAGTTGGGTGTTCTTCAAGCTCTTACGGATCAACTAAGAGACGGAAATATGATGTGTTTTTGAGTTTTCGAGGTGAAGATACTCGCACAAGCTTTACTGATCATTTATATGATTCTTTAAGACGCAAAGGATTAAGAACTTTTAGGCATGAAGAAGGACTTGAAAGGGGACAATATATCAACCCAAGTTTACTACAAGCCATTGAAGAATCTTGTTCTGCAATTGTTGTGCTCTCCCCAGGATTTGCTTCTTCAACATGGTGTTTGGATGAACTCCAAAAGATTCTTCATTCAAAAAAAGAGGTGGGTCTTCAAGTATTTCCAATCTTTTATGGTGTAGATCCTTCTGATGTTAGGAAACAAAAGGGAAGTTTTGAAGAAGCATTCATGAAGCATGAAGAAAGATTTACACAGGACAAAATGAAGGTGCACAGATGGAGGCATGTTTTAGAAGAAGTTGCTAGCTTATCTGGTTGGGACTCACGGAATAAGCATGAAACAGAATTCATTGAAAGCATTGCAAAAGAAATGAAGTCTAAGTTACACGATGAATCGCCATTTGATCTTGGTGCATTAGTTGGAATTGAATCAAAATTAGATGAGTTGGAGTCACTCATAGCAATTGATTCAGAAGGAGTTCGTTCTATAGGAATATGGGGAACAGGAGGCTTAGGCAAAACTACTCTTGCTAGAGCTTTTTATGACTGGAAGTGCAAGGATTTTGAGGTTTGTTGCTTTCTTCATAATATCAGAGAGGAATATGAAAAGGGTGATTTGATTTCATTGCAAAGAAATCTTCTTTTCTCTTTGAATAATAAAAGAAGTGTGGAAGTGGATGATTGTTATGAAGGAATTAAGCTGATAAAAAACATGTTGCAGGATAGAAAAATTCTACTAGTCCTTGATGATGTGAGTGATATAGGCCAACTTGAATATTTGGCTCGAGAGCAAGGATGGTTTGGCAATGGGAGTAGAATAATATTAACAATAAGAGGCATGCGTTTGTTATCATTATATGATGTATCTGCTCAGTATAACATCGGATTCTTGAGTGGTGACCAATCCCTTCAACTTTTCCGTCAAAATGCTTTTAAGGGAAAAAATCAACCAAATGAAGGTTACTTGATTCTTTCTAAAAATGTGATAGAATATGCTGGAGGCCTTCCTTTGGTTCTAAAAGTGTTAGGTTCACTTCTTTGTGGAAGAACTATAGAGGAATGGGAGGATGCACTTGCCAAGTTTAAGAAGGTTCCTCCAAAGGACATATTGAAGATACTTAATGTGTGTTTTGATAGATTAGATGATAAGGAAAAGACTATATTTTTGGATATTGCTTGCTTTTTTAATGGGATCGACAAAGATCGTGTCACACAAATTTTAGAAACTTTTGATGAAGATCTTTACCCAAAAATTGGAATAACAATTCTTATTGAGAAATCACTAGTAATCAATCGTGAAGGGCGTTTATGGGTGCATCATATTCTTCAAGATATGGGTAAATATATTGTCCTCCAAGAATCATTTGATAAGCGTTCTAGGATAATGTCTTTGAAGGATGCCAATGATGTACTAAAAACAAATAAGGGGATAGGAGCAATTCGAGGTATTGCTCTATCATTAGAAAAATCATCAGATGAACTTTGGGATCCTGAAGCCTTCTCAAAAATGAGTAATCTCAAGTTACTTATCATTTCAAGTTGCTCATCACATGTTTCTCGTTGCCAATTGAATCTTCCTCGTGGACTTAAATCTCTTCCCAATGAATTGAGAGTTTTTGAATGGGAGGGGTACCCTTTAGATTCTCTGCCCAGACATACTCAACCTGATAAACTTGTTCATCTAAAAATGCGACATAGCAAGTTAAAACAACTTTGGAGAGGAACACAGTCTCTACAAAGGCTGATGTCCATTGATTTATCTCATTCCAAATACCTAATCAAAACCCCAAATTTTGATGGAATTCCTAATCTTGAAAGATTGATTCTCAAAGGGTGTTCTAACCTTGTTGAAATTCACCAGTCCCTTGGGCAACACAAGAATCTTGTCATTGTTAATTTGAAAGGCTGCATAAAAGTTAAAATCCTTCCAAGAAAATTTGAGATGGATCGTTTACAGACTTTTGTTCTATCTGGTTGTTCAAAAATTAGAAAACTTCCTGAGTTTGGAAAGGATATGAAATGTCTCTCTAAGCTTGATTTAGAGGACACTTCTATATCCAAGCTACCTGAATCACTGGGCAATTTGATTGGTCTTGCTGAACTAGATTTGTCAGGCTGCAAAAATCTGGTTTGCCTTCCAAATAATGATTGTAAATTGATAGCTAGGAACATTATAACAATTTCTGGTTGGTCAAAGCTTTCAAGGATGCCAGAGGATTTGAATGAAAATGGGGCTTTGGAAGTGCTTGATGTGGGTTGTCGAATTTCTAAAGAGGCACAATCAATTTGTGAGTACAATGGTCAAGCACATTCTTTAACGTCATGGAGTCGCTTCTCCCTTCTCAGGAAGGCATTTGGGTTTCAAAGGCCTTCAAACTCAATAAATCTTTTCTTGTCCCCTTCTTTTTCATCCTTGACCGAATTACATTTAGAGTGTTGCAATCTCTATGATGGATCACTTCCTGATAACATTAGCAGCTTTGCATCATTGGCAACATTAAATTTAAGTGGAAACAATTTCATTGACTTACCATCTGGCCTCATTTCCAATCTTTCGAAGCTTCAATGGATTGTTCTCTTTGATTGCCCAATGCTTAAGTCCTTGCCACAACTTCCGTCAAATCTATCAGTTATTTGGGCAAATGGTAGTCCATCAATGGAACATTACATATGTTCGCAGAAACTATGGGAGTTCATTGATTCATTCCAATCTCAGATGATTCTGAAGGACATAAAGTGTTCTTTTTAA 2925 0.3655 MALDVNGVGCSSSSYGSTKRRKYDVFLSFRGEDTRTSFTDHLYDSLRRKGLRTFRHEEGLERGQYINPSLLQAIEESCSAIVVLSPGFASSTWCLDELQKILHSKKEVGLQVFPIFYGVDPSDVRKQKGSFEEAFMKHEERFTQDKMKVHRWRHVLEEVASLSGWDSRNKHETEFIESIAKEMKSKLHDESPFDLGALVGIESKLDELESLIAIDSEGVRSIGIWGTGGLGKTTLARAFYDWKCKDFEVCCFLHNIREEYEKGDLISLQRNLLFSLNNKRSVEVDDCYEGIKLIKNMLQDRKILLVLDDVSDIGQLEYLAREQGWFGNGSRIILTIRGMRLLSLYDVSAQYNIGFLSGDQSLQLFRQNAFKGKNQPNEGYLILSKNVIEYAGGLPLVLKVLGSLLCGRTIEEWEDALAKFKKVPPKDILKILNVCFDRLDDKEKTIFLDIACFFNGIDKDRVTQILETFDEDLYPKIGITILIEKSLVINREGRLWVHHILQDMGKYIVLQESFDKRSRIMSLKDANDVLKTNKGIGAIRGIALSLEKSSDELWDPEAFSKMSNLKLLIISSCSSHVSRCQLNLPRGLKSLPNELRVFEWEGYPLDSLPRHTQPDKLVHLKMRHSKLKQLWRGTQSLQRLMSIDLSHSKYLIKTPNFDGIPNLERLILKGCSNLVEIHQSLGQHKNLVIVNLKGCIKVKILPRKFEMDRLQTFVLSGCSKIRKLPEFGKDMKCLSKLDLEDTSISKLPESLGNLIGLAELDLSGCKNLVCLPNNDCKLIARNIITISGWSKLSRMPEDLNENGALEVLDVGCRISKEAQSICEYNGQAHSLTSWSRFSLLRKAFGFQRPSNSINLFLSPSFSSLTELHLECCNLYDGSLPDNISSFASLATLNLSGNNFIDLPSGLISNLSKLQWIVLFDCPMLKSLPQLPSNLSVIWANGSPSMEHYICSQKLWEFIDSFQSQMILKDIKCSF 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1908 974 Gene3D Ribonuclease Inhibitor 539 706 IPR032675 -
Prci8g1908 974 SUPERFAMILY L domain-like 546 949 - -
Prci8g1908 974 Gene3D - 355 440 IPR042197 -
Prci8g1908 974 Pfam Leucine Rich Repeat 616 635 IPR011713 -
Prci8g1908 974 Pfam TIR domain 22 192 IPR000157 GO:0007165
Prci8g1908 974 PRINTS Disease resistance protein signature 221 236 - -
Prci8g1908 974 PRINTS Disease resistance protein signature 391 405 - -
Prci8g1908 974 PRINTS Disease resistance protein signature 752 768 - -
Prci8g1908 974 PRINTS Disease resistance protein signature 297 311 - -
Prci8g1908 974 Coils Coil 973 974 - -
Prci8g1908 974 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Prci8g1908 974 Gene3D - 187 349 IPR027417 -
Prci8g1908 974 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 797 IPR044974 GO:0006952
Prci8g1908 974 SUPERFAMILY "Winged helix" DNA-binding domain 427 531 IPR036390 -
Prci8g1908 974 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 165 IPR035897 -
Prci8g1908 974 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Prci8g1908 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 450 IPR027417 -
Prci8g1908 974 Gene3D - 15 186 IPR035897 -
Prci8g1908 974 SMART till_3 22 162 IPR000157 GO:0007165
Prci8g1908 974 Gene3D Ribonuclease Inhibitor 707 833 IPR032675 -
Prci8g1908 974 Gene3D Ribonuclease Inhibitor 834 947 IPR032675 -
Prci8g1908 974 Pfam NB-ARC domain 215 423 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1908 Prci-Chr8 17367573 17373084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1908 21 824 WRKY Transcription Factor Family AT4G12020 31.136 7.95e-98 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1908 - - pcin:129318967 1922.9