Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1904 ATGGCACTTGATGTTAATGGAGTTGGGTGTTCTTCAAGCTCTTACGGATCAACTAAGAGACGGAAATATGATGTGTTTTTGAGTTTTCGAGGTGAAGATACTCGCACAAGCTTTACTGATCATTTATATGATTCTTTAAGACGCAAAGGATTAAGAACTTTTAGGCATGAAGAAGGACTTGAAAGGGGACAATATATCAACCCAAGTTTACTACAAGCCATTGAAGAATCTTGTTCTGCAATTGTTGTGCTCTCCCCAGGATTTGCTTCTTCAACATGGTGTTTGGATGAACTCCAAAAGATTCTTCATTCAAAAAAAGAGGTGGGTCTTCAAGTATTTCCAATCTTTTATGGTGTAGATCCTTCTGATGTTAGGAAACAAAAGGGAAGTTTTGAAGAAGCATTCATGAAGCATGAAGAAAGATTTACACAGGACAAAATGAAGGTGCACAGATGGAGGCATGTTTTAGAAGAAGTTGCTAGCTTATCTGGTTGGGACTCACGGAATAAGCATGAAACAGAATTCATTGAAAGCATTGCAAAAGAAATGAAGTCTAAGTTACACGATGAATCGCCATTTGATCTTGGTGCATTAGTTGGAATTGAATCAAAATTAGATGAGTTGGAGTCACTCATAGCAATTGATTCAGAAGGAGTTCGTTCTATAGGAATATGGGGAACAGGAGGCTTAGGCAAAACTACTCTTGCTAGAGCTTTTTATGACTGGAAGTGCAAGGATTTTGAGGGGATAGGAGCAATTCGAGGTATTGCTCTATCATTAGAAAAATCATCAGATGAACTTTGGGATCCTGAAGCCTTCTCAAAAATGAGTAATCTCAAGTTACTTATCATTTCAAGTTGCTCATCACATGTTTCTCGTTGCCAATTGAATCTTCCTCGTGGACTTAAATCTCTTCCCAATGAATTGAGAGTTTTTGAATGGGAGGGGTACCCTTTAGATTCTCTGCCCAGACATACTCAACCTGATAAACTTGTTCATCTAAAAATGCGACATAGCAAGTTAAAACAACTTTGGAGAGGAACACAGTCTCTACAAAGGCTGATGTCCATTGATTTATCTCATTCCAAATACCTAATCAAAACCCCAAATTTTGATGGAATTCCTAATCTTGAAAGATTGATTCTCAAAGGGTGTTCTAACCTTGTTGAAATTCACCAGTCCCTTGGGCAACACAAGAATCTTGTCATTGTTAATTTGAAAGGCTGCATAAAAGTTAAAATCCTTCCAAGAAAATTTGAGATGGATCGTTTACAGACTTTTGTTCTATCTGGTTGTTCAAAAATTAGAAAACTTCCTGAGTTTGGAAAGGATATGAAATGTCTCTCTAAGCTTGATTTAGAGGACACTTCTATATCCAAGCTACCTGAATCACTGGGCAATTTGATTGGTCTTGCTGAACTAGATTTGTCAGGCTGCAAAAATCTGGTTTGCCTTCCAAATAATGATTGTAAATTGATAGCTAGGAACATTATAACAATTTCTGGTTGGTCAAAGCTTTCAAGGATGCCAGAGGATTTGAATGAAAATGGGGCTTTGGAAGTGCTTGATGTGGGTTGTCGAATTTCTAAAGAGGCACAATCAATTTGTGAGTACAATGGTCAAGCACATTCTTTAACGTCATGGAGTCGCTTCTCCCTTCTCAGGAAGGCATTTGGGTTTCAAAGGCCTTCAAACTCAATAAATCTTTTCTTGTCCCCTTCTTTTTCATCCTTGACCGAATTACATTTAGAGTGTTGCAATCTCTATGATGGATCACTTCCTGATAACATTAGCAGCTTTGCATCATTGGCAACATTAAATTTAAGTGGAAACAATTTCATTGACTTACCATCTGGCCTCATTTCCAATCTTTCGAAGCTTCAATGGATTGTTCTCTTTGATTGCCCAATGCTTAAGTCCTTGCCACAACTTCCGTCAAATCTATCAGTTATTTGGGCAAATGGTAGTCCATCAATGGAACATTACATATGTTCGCAGAAACTATGGGAGTTCATTGATTCATTCCAATCTCAGGTTCATAATATCAATGATTTCTCAATATTAGATGATTCTGAAGGACATAAAGTGTTCTTTTTAAGTCACGTGTCTGGAATTCTTACATGGGATTCACAAATTCCTGACTTCATGCAACCCGGTCGCCAATTAATCATTCCTGGTAGTGAAGTGCCATCATGGTTTCATAATCAAGACTACTTTTGTGAGAAAGAACTCAATGATCGAAATGTGTCATTCATAGTAAGCACGCCTGAATATTGTCGAAGAAGTGAATGGTGGGGCATAGCCACATGCTTAGTGATAGAAAACGATTTGGCAAATGACGAAGAGTTTGATGCTGTTTGGTGGACATCCAGATTTCCTAATGATGAATTTCCAAATACGTATGGTTGCTCTGTCATTGTGTTACAGGCAGATTGGAGCCGTCAACTCTGTATTATATATATTCGTTGTTCCTCTTTAGTTGTAAACAAACTTCAAATGGTATTTTTTACTGGACTTAAGACATTGGGAAATGATGAGTCACCGAAGTCTAAAGTAAGGAAGTGTGGATGGCGTGTGGTGTGTAAAGAAGATGTTGAAACATGGAATGAGTGTTGTAGTAGCATCAATGATGGAATCATAGTTAGCCCAAAACGCCAAGCCACCTAA 2667 0.3795 MALDVNGVGCSSSSYGSTKRRKYDVFLSFRGEDTRTSFTDHLYDSLRRKGLRTFRHEEGLERGQYINPSLLQAIEESCSAIVVLSPGFASSTWCLDELQKILHSKKEVGLQVFPIFYGVDPSDVRKQKGSFEEAFMKHEERFTQDKMKVHRWRHVLEEVASLSGWDSRNKHETEFIESIAKEMKSKLHDESPFDLGALVGIESKLDELESLIAIDSEGVRSIGIWGTGGLGKTTLARAFYDWKCKDFEGIGAIRGIALSLEKSSDELWDPEAFSKMSNLKLLIISSCSSHVSRCQLNLPRGLKSLPNELRVFEWEGYPLDSLPRHTQPDKLVHLKMRHSKLKQLWRGTQSLQRLMSIDLSHSKYLIKTPNFDGIPNLERLILKGCSNLVEIHQSLGQHKNLVIVNLKGCIKVKILPRKFEMDRLQTFVLSGCSKIRKLPEFGKDMKCLSKLDLEDTSISKLPESLGNLIGLAELDLSGCKNLVCLPNNDCKLIARNIITISGWSKLSRMPEDLNENGALEVLDVGCRISKEAQSICEYNGQAHSLTSWSRFSLLRKAFGFQRPSNSINLFLSPSFSSLTELHLECCNLYDGSLPDNISSFASLATLNLSGNNFIDLPSGLISNLSKLQWIVLFDCPMLKSLPQLPSNLSVIWANGSPSMEHYICSQKLWEFIDSFQSQVHNINDFSILDDSEGHKVFFLSHVSGILTWDSQIPDFMQPGRQLIIPGSEVPSWFHNQDYFCEKELNDRNVSFIVSTPEYCRRSEWWGIATCLVIENDLANDEEFDAVWWTSRFPNDEFPNTYGCSVIVLQADWSRQLCIIYIRCSSLVVNKLQMVFFTGLKTLGNDESPKSKVRKCGWRVVCKEDVETWNECCSSINDGIIVSPKRQAT 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1904 888 Gene3D Ribonuclease Inhibitor 259 420 IPR032675 -
Prci8g1904 888 Gene3D Ribonuclease Inhibitor 551 664 IPR032675 -
Prci8g1904 888 Gene3D Ribonuclease Inhibitor 421 550 IPR032675 -
Prci8g1904 888 Gene3D - 15 186 IPR035897 -
Prci8g1904 888 Gene3D - 187 258 IPR027417 -
Prci8g1904 888 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 413 659 IPR044974 GO:0006952
Prci8g1904 888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 250 IPR027417 -
Prci8g1904 888 PRINTS Disease resistance protein signature 466 482 - -
Prci8g1904 888 PRINTS Disease resistance protein signature 221 236 - -
Prci8g1904 888 Pfam TIR domain 22 192 IPR000157 GO:0007165
Prci8g1904 888 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Prci8g1904 888 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 165 IPR035897 -
Prci8g1904 888 SUPERFAMILY L domain-like 260 667 - -
Prci8g1904 888 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Prci8g1904 888 Pfam Leucine Rich Repeat 330 349 IPR011713 -
Prci8g1904 888 SMART till_3 22 162 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1904 Prci-Chr8 17365324 17373084 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1904 249 538 WRKY Transcription Factor Family AT4G12020 35.570 3.19e-39 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1904 - - pcin:129318967 1315.83