Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1901 ATGATGTCTAAGTTACTTGATGAATCACCATCTGACCTTGGTGTATTAGTTGGAATTGAATCAAAATTAGATGAGTTGGAGTTAGTCATAGCAAGTGATCATTTGGAAGGAGTTCGATCTATAGGAATATGGGGAGTAGGAGGCTTAGGCAAAACTACTCTTGCTAGAGCTTTTTATGTTCGAAAGTGCAAGGATTTTGAGGTTTGTTGCTTTCTTCATAATATCAGAGAGGTATATGAAAAGGGTGGTTTGATTTCATTGCAAAGAAAACTTCTTGTTTCTTTGAATAAAAGAAGTGTGGAAGTGGATGATTGTTATGAAGGAATGAAGTTGATAAAAAACATGTTAGAGGATAGAAAAGTTCTACTTGTCCTTGATGACGTAAGCGATATAAGCCAGCTTGAACATTTGGCTCAAAAGCAAGGATGGTTTGGTGAGGGGAGTAGAATAATAATAACAACAAGAGATAAGCGTTTGTTATCATCATATGATGTATCGACTCAATACAATATAAAATTCTTGAGCGATGGCGAATCCTTTGATCTTTTTTGTCAACATGCTTTTCAAGGAAAAAATCAACCATCTGAGAATTACTTGGAGCTTTCTAAAAGCGTGATGGAATATGCTGGAGGCCTTCCTTTAGCTCTGAAAGTGTTAGGTTCTTTTCTTTGCGGAAGAACTATAGAGAAATGGAAGGATGCACTAGCTAAGTTAAAGAAGGTTCCTCATGATAACATTTTGAAGATACTTAAGGTTAGTGTCGATGGATTAGATCAAAAGGAGAAGACTATATTCTTAGATATTTCTTGCTTTTTCAATGGGATGGCCATAGACCGTGTCAAACAAATTTTAGAAACTTTGGATGAGGATCTTCACCCAGAAATTGGAATAGATGTTCTTATTGAAAAATCACTAGTAATTAGCTACGACGGCCGTCTATGGGCGCATGATATTCTTCAAGATATGGGTAAATATATTGTCTTTCAAGAATCACCTGATGATGCTAGAAAACGTTCTAGGATATTTTCTTTGCAGGATGCCAATGACGTACTAGAAAGAAATAAGGGGATGGGAACAATCCGGGGTATAGTTCTAACACTAGAAAATTCATCAAATGCATTTTGGGATCCTGAAGCCTTCTCAAAGATGAGTAATCTCAAGTTACTTGTCATTTTGAGTCGCTTACGTGTTTCTCATTGCCTATTGAATCTTCCACAAGGACTTAAGTCCCTTTCCAACGGGTTGAAAGTCATAAAATGGAAGGGGCTCAAGTCCATTGATTTATCTTATTCCAAATACCTCATCAAAATCCCAGATTTTGATGGAATTCCCAATCTTGAAAGATTGATTCTCAAATGGTGTCCTAACGTTGTTGAAATTCACCAATCTCTTGGGCAACACAAGAATCTTGTCATTGTTAATTTGAAAGGCTGCACAAAAGTTAAAACCCTTCCAAGAAAATTTGAGATGAATCGCTTAGAAACTTTTGTTCTATCTGGTTGCTTAAAAGTAAGAAAACTTCCTGAGTTTGGAAAAGACATGAATCGTCTATCTAAGCTTGATTTAGAGAATACTGCTATAGCCAAGCTACCTCCATCACTGGGCAATTTGACTGGTCTTGTTGAATTAAATTTGATGAACTGCAAAAATCTGGTTTGCCTTCCAAATGACATTCGTAAATTGAAAGTTCTAAAGATTATCCATATTTCTGGTTGCTCGAAATTTTCAAGGCTGCCAGCGAATTTGAATGAAAATAAGGCGTTGGAAGTGCTTCATTTGTGTGGAATTCCCACGAAAGGGCTGTCAATATGTGAATGCAATGGTCAAGCACAATCTTTATCATCAGGGAGCTCCTTCTCCTTTCTCGGAAAGGCATTAGGGCTTCAAAGGCCTTCAAGATCAACAAATTTTATGTTGTCCCCTTCTTTATCATCCCTGAAGGAATTACATTTAAGTTTTTGTGATCTCCATGATGGATCACTTCCTAATGACATCAGCAAGTTATCATCATTGACAACAGTAGATTTAAGTGGAAACAATTTCATTGACTTACCATCTGGCCTCATTTCCAATCTTTCAAAACTTAAAGCTATTGGTCTCGTGGATTGCCCAAGGCTTCAATCTTTGCCACAACTTCCTTCGAATCTATCCATTATTGTGGCAAGTGGTTGTCCATCAATGGAACATTACGCATGTTCAGACGAACTCTGGGAGTTCATTGAATCATTTCAATCTCAGGAGGTTCAAAACCTCAATGAAGTGTCATTTGATAACCTGGATGAACAATACAAAAGTGTACCTTTAAGTTTTGTGTCTGCTATTATGACGCGGGATTCACAAATCCCTGACTTCTTCATGCAACCTACTCGGGTGTTAGCAATTCCAGGTAGTGAAGTGCCACCATGGTTTTCTGATCAAAACTACATTTGTGAGGAAGAATTCATTCTTCCAAATGTGTCATTCACAATAAGCATACCTGATGGTTGTGGTTCAAGTGAATGGGGCATAGCCACATGCTTGGTGTTAGAAAACGATTTGGCATATGGAGTAGGGTGTGATCCAGTTTTGTGGACCTGCAGATTTCCTGATGATGAATTTCCAGATACGTATTGTCTCTACAATATTAGTTTACAATCAAATCGTAGTCATGAACTTTGTATTATATATATTCGTTGTTCCTCTTTGGTTGTAAACGGACTTCAAATGGTATTTTTTGCTGGGAATGTATTTGATAATGAGTCCCCAAAGTTTAAAATAAAGAAGTGTGGATGGCGTGTGGTGTGTAAAGAAGATATTGAAACTTGGCGAAGAACAAGGGACGAAGGCCCTAGCAGCATCAATAATTCCGTTGAGATCATTGATCTAGACATCAACAATATCATTGAAGATGAGTCTATCCCTAAGGCAGAGCCTAGTGCCCCTAACAAAATCCATAAGAGTAGAACAAATGCTTCAAGCGATGTTGAAAGATGGCAAAAATCCAGAGATGAAGCTGGTTTTGATTCAGATAACTTAAACAATCCCAATGAAGTTGAGAATAAAGAAGGCTGTAGCTGTTGGGAGTGGATCTCAAATTTTTGGCATTCCATTGTTAAGGTTGTGTATATGACTTAG 3114 0.3748 MMSKLLDESPSDLGVLVGIESKLDELELVIASDHLEGVRSIGIWGVGGLGKTTLARAFYVRKCKDFEVCCFLHNIREVYEKGGLISLQRKLLVSLNKRSVEVDDCYEGMKLIKNMLEDRKVLLVLDDVSDISQLEHLAQKQGWFGEGSRIIITTRDKRLLSSYDVSTQYNIKFLSDGESFDLFCQHAFQGKNQPSENYLELSKSVMEYAGGLPLALKVLGSFLCGRTIEKWKDALAKLKKVPHDNILKILKVSVDGLDQKEKTIFLDISCFFNGMAIDRVKQILETLDEDLHPEIGIDVLIEKSLVISYDGRLWAHDILQDMGKYIVFQESPDDARKRSRIFSLQDANDVLERNKGMGTIRGIVLTLENSSNAFWDPEAFSKMSNLKLLVILSRLRVSHCLLNLPQGLKSLSNGLKVIKWKGLKSIDLSYSKYLIKIPDFDGIPNLERLILKWCPNVVEIHQSLGQHKNLVIVNLKGCTKVKTLPRKFEMNRLETFVLSGCLKVRKLPEFGKDMNRLSKLDLENTAIAKLPPSLGNLTGLVELNLMNCKNLVCLPNDIRKLKVLKIIHISGCSKFSRLPANLNENKALEVLHLCGIPTKGLSICECNGQAQSLSSGSSFSFLGKALGLQRPSRSTNFMLSPSLSSLKELHLSFCDLHDGSLPNDISKLSSLTTVDLSGNNFIDLPSGLISNLSKLKAIGLVDCPRLQSLPQLPSNLSIIVASGCPSMEHYACSDELWEFIESFQSQEVQNLNEVSFDNLDEQYKSVPLSFVSAIMTRDSQIPDFFMQPTRVLAIPGSEVPPWFSDQNYICEEEFILPNVSFTISIPDGCGSSEWGIATCLVLENDLAYGVGCDPVLWTCRFPDDEFPDTYCLYNISLQSNRSHELCIIYIRCSSLVVNGLQMVFFAGNVFDNESPKFKIKKCGWRVVCKEDIETWRRTRDEGPSSINNSVEIIDLDINNIIEDESIPKAEPSAPNKIHKSRTNASSDVERWQKSRDEAGFDSDNLNNPNEVENKEGCSCWEWISNFWHSIVKVVYMT 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1901 1037 PRINTS Disease resistance protein signature 40 55 - -
Prci8g1901 1037 PRINTS Disease resistance protein signature 666 682 - -
Prci8g1901 1037 PRINTS Disease resistance protein signature 115 129 - -
Prci8g1901 1037 PRINTS Disease resistance protein signature 209 223 - -
Prci8g1901 1037 SUPERFAMILY L domain-like 315 734 - -
Prci8g1901 1037 Gene3D Ribonuclease Inhibitor 633 787 IPR032675 -
Prci8g1901 1037 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 585 IPR044974 GO:0006952
Prci8g1901 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 268 IPR027417 -
Prci8g1901 1037 Gene3D Ribonuclease Inhibitor 355 620 IPR032675 -
Prci8g1901 1037 Gene3D - 173 258 IPR042197 -
Prci8g1901 1037 Gene3D - 3 169 IPR027417 -
Prci8g1901 1037 MobiDBLite consensus disorder prediction 982 1000 - -
Prci8g1901 1037 MobiDBLite consensus disorder prediction 968 1007 - -
Prci8g1901 1037 FunFam Disease resistance protein (TIR-NBS-LRR class) 175 258 - -
Prci8g1901 1037 Pfam NB-ARC domain 40 244 IPR002182 GO:0043531
Prci8g1901 1037 SMART LRR_typ_2 643 667 IPR003591 -
Prci8g1901 1037 SMART LRR_typ_2 668 691 IPR003591 -
Prci8g1901 1037 SMART LRR_typ_2 514 537 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1901 Prci-Chr8 17325469 17332681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1901 434 653 WRKY Transcription Factor Family AT5G45050 23.377 3.48e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1901 - - pcin:129317404 2052.33