Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1900 ATGGCACTTGAAGCTCATGGAATTGACCACCCTTCAAGCTCTTTTAGTTCGGCTAGGAGGTGGAAGTATCATGTCTTCTTGAGTTTTCGAGGAGAAGACACTTGTAGAAGCTTTACAAATCACTTGTATTGTGCTTTACAACGCAATGGAATCATAGCTTTCAATGATGACGAAGAACTTGAGAGGGGAGAAGTTATTAAACCAAGTCTGCTTCGAGCAATTGAAGAATCTCTTTCTGCAATTGTTGTTCTTTCTCCAAATTATGCTTCTTCAACTTGGTGCCTGGATGAGCTCTCAAAGATTCTCCATTCTAAGAAAGAGTCAGGTCTTTATGTATTTCCAATATTTTATGGTGTGGATCCATCTGATGTTGAACATCAGAGAGGAAGTTTTGCAGAAGCGTTTAAAAAGCATGAAGAAATATTTACACGAGATGAAATGAAGGTGCAAAATTGGAGGGATGCTTTAAAAGAAGTTGCTAACTTATCTGGCTGGCACGCTGACAATTGTGGCCTTTCTTTGGCACTCAAAGTGTTGGGTTCTTTTTTGTGTGGAAGAACTATAGAGAAATGGAAGGATGCGCTTGCTAAGTTGAAGAAGGTTCCTCCAAATAACATTTTGAAGATACTTAAGGTGAGTTTTGATGAATTAGATCATAGGGAAAAGACTATATTCTTGGATATTGCTTGCTTTTTCAATGGAATGGCCAAAGGCCCTCTCATACAAATTTTAGAAATTTTGGATGAGGATCTTCACCCAACAATTGGAATAGATGTTCTTATTGACAAATCACTAGTAATCAATTCAGAAGGGTATTTGTGGGTGCCCCATATACTTCGAGACATGGGTAAATATATAGTCTCTCAAGCATCACCTAATGATGCTGGCAAGCATTCTAGGATATTGTCTTTGAAGGATGCCAATGATGTATTAGAAGGAAATAAGGGGACAGGAGCAATTCGGGGTATACCCATAATAGTAGACGAAACATTTAATGCACTTGGGAATCCTGACGCCTTCTTAAGGATGATCAATCTCAAATTACTTGTCATTTCAAGCTGCTCACATATTTCTCATTGTCAATTGAATCTTTCACGTGGAATTAAGTCCCTTCCCAATGGGCTGAAACTCTTAGCATGGGATGGGTATCCTTTAGATTCTTTGCCCAATCAAACAAAATTCCATGAACTTCTTGTTCTAAAAATGCAACATAGCAAGTTAAAAGAACTTTGGAGGGGAGCACGGAAGGGTGTTCTAAACTGGTTGAAGTTACACCAGTCTCTTGGGCAACATAAGAATCTTGTTATTGTTAATTTGAAAGGCTGCAAAAAAGTTAGAACCCTTCCAAGAAAATTTGAGATGGATCGCTTAAAGATTTTTGTTCTACCCGGTTGTTCAAAAATTAGAAAACTTCCTGAGTTTGAAAAGGATATGAAATGTCTCTCTACACTTGATTTAGAGAACAATGCTATATCCAAACTACCTGAATCATTGGGCAATTTGATTGGTCTTGTTGAATTAAATTTGACGGGTTGCACAAATCTTGTTTGGCCTCCAAATAATGTTCATAAATTCATAGCCAGGAAGATTATCAAAATTTCTGGTTGGTCTAACCTTTCAAGGATGCCAGAGGATTTGAATGAAAATGGGACTTTGGAAGTGCTTGATGTGGGTCGAATTTCTTCATCATCATGGAGTTGTGTGTCCCTTCTCAGGAAGTCATTTGGGCTTCAAGGGCCTTTAAGCTCAACAAATTTTATGGTACCCATTTCTTTATCATTCTTGAGCCAATTAAATTTAGGTTATTGCAAACTTCATGATGGATCACTTCCAGATGACATAAGCATGTTATCATCATTGACACATTCAATTTTAAGTGGAAACAATTTCATTGACTTACCATCTCGCCTCATTTCCAATCTTTCCAAGCTTCTATTTTTTGATATTGTTAATTGCCCTACGTTTCGGTCCTTGCCACAACTTCCGTCAAATCTATCAACCATTCTCGCAAGCGGTTGTCCATCAATGGAGCATTACATGTGTTCGCAGAAACTATGGGAGTTCATTGAATCATTCCAATCTCAGGTTATCAATTTCAGCGACGGCTTTATAGCTTGTTATGAAGAACATAAACCTGTCATTTTATTTCAGGAGTATGGAATCCTTACACAAGATTTACAAATTCCTGACTTCTTCAAGCAATATAGTCGTGTATTGACAATTCAAGGTAGTGAAGTGCCACCATGGTTTCATAATCAAAACTATTTTTGTGAGAAAGAAATCAGTGATCCAAATGTGTCATTCACAGCAAGCATACCTGAATATTGTCATTCAAGCGAATGGGGGGGCACAGCCACATGCTTAGTGTTAGAAAACGATTTAGCATCCTCACACCTTGACTTGGAGCACCCTGAGATTATGTTTGATTATCCATCAACTCTGTGTTATCTATGCTTGTTGTTCCTCTTTGGCTGCAAACCAACTTCAAATGGTATTTTTGGTGACTGA 2508 0.3796 MALEAHGIDHPSSSFSSARRWKYHVFLSFRGEDTCRSFTNHLYCALQRNGIIAFNDDEELERGEVIKPSLLRAIEESLSAIVVLSPNYASSTWCLDELSKILHSKKESGLYVFPIFYGVDPSDVEHQRGSFAEAFKKHEEIFTRDEMKVQNWRDALKEVANLSGWHADNCGLSLALKVLGSFLCGRTIEKWKDALAKLKKVPPNNILKILKVSFDELDHREKTIFLDIACFFNGMAKGPLIQILEILDEDLHPTIGIDVLIDKSLVINSEGYLWVPHILRDMGKYIVSQASPNDAGKHSRILSLKDANDVLEGNKGTGAIRGIPIIVDETFNALGNPDAFLRMINLKLLVISSCSHISHCQLNLSRGIKSLPNGLKLLAWDGYPLDSLPNQTKFHELLVLKMQHSKLKELWRGARKGVLNWLKLHQSLGQHKNLVIVNLKGCKKVRTLPRKFEMDRLKIFVLPGCSKIRKLPEFEKDMKCLSTLDLENNAISKLPESLGNLIGLVELNLTGCTNLVWPPNNVHKFIARKIIKISGWSNLSRMPEDLNENGTLEVLDVGRISSSSWSCVSLLRKSFGLQGPLSSTNFMVPISLSFLSQLNLGYCKLHDGSLPDDISMLSSLTHSILSGNNFIDLPSRLISNLSKLLFFDIVNCPTFRSLPQLPSNLSTILASGCPSMEHYMCSQKLWEFIESFQSQVINFSDGFIACYEEHKPVILFQEYGILTQDLQIPDFFKQYSRVLTIQGSEVPPWFHNQNYFCEKEISDPNVSFTASIPEYCHSSEWGGTATCLVLENDLASSHLDLEHPEIMFDYPSTLCYLCLLFLFGCKPTSNGIFGD 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1900 835 ProSiteProfiles TIR domain profile. 21 183 IPR000157 GO:0007165
Prci8g1900 835 SUPERFAMILY "Winged helix" DNA-binding domain 205 311 IPR036390 -
Prci8g1900 835 SMART till_3 22 162 IPR000157 GO:0007165
Prci8g1900 835 ProSiteProfiles Leucine-rich repeat profile. 480 501 IPR001611 GO:0005515
Prci8g1900 835 SMART LRR_typ_2 617 640 IPR003591 -
Prci8g1900 835 SMART LRR_typ_2 394 417 IPR003591 -
Prci8g1900 835 SMART LRR_typ_2 478 501 IPR003591 -
Prci8g1900 835 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 175 - -
Prci8g1900 835 Pfam TIR domain 22 165 IPR000157 GO:0007165
Prci8g1900 835 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 165 IPR035897 -
Prci8g1900 835 Gene3D Ribonuclease Inhibitor 326 577 IPR032675 -
Prci8g1900 835 Gene3D Ribonuclease Inhibitor 578 698 IPR032675 -
Prci8g1900 835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 228 IPR027417 -
Prci8g1900 835 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 170 520 IPR044974 GO:0006952
Prci8g1900 835 SUPERFAMILY L domain-like 336 680 - -
Prci8g1900 835 Gene3D - 15 181 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1900 Prci-Chr8 17283907 17288657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1900 25 677 WRKY Transcription Factor Family AT5G45050 28.017 1.23e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1900 - - pcin:129317405 1159.05