Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1897 ATGACCAGTCACTTCAACTTTTCCATCAAAATGCTTTTTAAAGGAAAAAATCAACCAAATGAAGGTTACTTAAAGCTTTCTAAAGATGTGATAAAGTATGCTGGAGGTCTTCCTTTATCTCTCAAAGTGTTAGGTTCATTTCTTTGCGGAAGAACTATAGTGGAATGGAAGGATGCACTTGCCAAGTTCAAGAAGGTTCCTCCAAAGGACATATTGAAAATACTTAAAGTGAGTTTTGATGGATTAGATGATAAGGAGAAGACTATATTCTTGGATGTTGCTTGCTTTTTCAATGGGATGGCCAAAGATTATGTCATACAAATTTTAGAAACATTTGATGAAGATCTTCACCCAAAATTTGGAATAAAAGTTCTTACTGAGAAATCACTGCTAGTAATCAATCATGAAGGGCGTCTGTGGGTGCATGATATTCTTCAAGATATGGGTAAATATATTGTCCTTCAAGAATCACCTAATGATGCCAGTAAGCGTTCTAGGATATTGTCTTTGAAGGATGCCAATGATATCCTAAAAAGAAATAAGGGTACGAGAGCAATTCGAGGTATAGCTCTAACACTAGAAAAATCATCTGATGCACTTTGGGATCCTGAAGCCTTCGTACAAATGCGTAATCTCAAGTTACTTATCATTTCAAGTTGCTCATCACATGTTTCTCCTTGCCAATTGAATCTTCCTGGTGGACTTAAATCTCTTTCCAATGAGTTGAGAGTTTTTGAATGGGAGGGGTATCCTTTAGATTCTCTGCCTAGACATACTCAACTTGATAAACTTGTTCACCTAAAAATGCAACATAGCAAAGTAAAAGAACTTTGCAGTGGGGCACAGTCTCTACAAAGGCTGATGTCCATTGATTTATCTCATTCCAAATACCTCATCAAAACCTCAGATTTTGATGGAATTCCTAATCTTGAACGATTGATCCTCAAAGGGTGTTCTAACCTTGTTGAAATTCACCAGTCTCTTGGGCAACACAAGAATCTTGTCATTGTTAATTTAAAAGGTTGCACAAAAGTTAAAACCCTTCCAAAAAAATTTGAGATGGATAGCTTACAGGCTTTTGTTCTATCCGATTGTTCAAAAATTAGAAAACTTCCTGAGTTTGGAAAGGATATGAAATGTCTCTCTAAGCTTGATTTAAAGGACACCGCTATATCCAAACTACCTGAATCACTAGGCAATTTGATTGGTCTTGTTGAATTAAATTTGAAGATTATCACAATTTCTGGCTGGCCAAAGATTTCAAGGATGCCAAAAGATTTGAATGAAAACGGGACTTTGGAAGTGCTTAATTATGTGGGTCGTCGACTTTCTAAAGAGGCACAATCAATTTGTGAGTACAATGGTCAACCTGACTTCTTCATGCAACCCATTCGCCAATTAATAATTCCTGGCAGTGAAGTGCCATCATGGTTTCATAATCAAGACTACTTTTGTGAGAAAGAATTCAATGATCCAAATGTGTCATTCATAATTTCCGAATGA 1503 0.3633 MTSHFNFSIKMLFKGKNQPNEGYLKLSKDVIKYAGGLPLSLKVLGSFLCGRTIVEWKDALAKFKKVPPKDILKILKVSFDGLDDKEKTIFLDVACFFNGMAKDYVIQILETFDEDLHPKFGIKVLTEKSLLVINHEGRLWVHDILQDMGKYIVLQESPNDASKRSRILSLKDANDILKRNKGTRAIRGIALTLEKSSDALWDPEAFVQMRNLKLLIISSCSSHVSPCQLNLPGGLKSLSNELRVFEWEGYPLDSLPRHTQLDKLVHLKMQHSKVKELCSGAQSLQRLMSIDLSHSKYLIKTSDFDGIPNLERLILKGCSNLVEIHQSLGQHKNLVIVNLKGCTKVKTLPKKFEMDSLQAFVLSDCSKIRKLPEFGKDMKCLSKLDLKDTAISKLPESLGNLIGLVELNLKIITISGWPKISRMPKDLNENGTLEVLNYVGRRLSKEAQSICEYNGQPDFFMQPIRQLIIPGSEVPSWFHNQDYFCEKEFNDPNVSFIISE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1897 500 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 388 IPR044974 GO:0006952
Prci8g1897 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 92 IPR027417 -
Prci8g1897 500 Gene3D - 6 83 IPR042197 -
Prci8g1897 500 SUPERFAMILY L domain-like 141 444 - -
Prci8g1897 500 Gene3D Ribonuclease Inhibitor 199 353 IPR032675 -
Prci8g1897 500 Gene3D Ribonuclease Inhibitor 354 480 IPR032675 -
Prci8g1897 500 PRINTS Disease resistance protein signature 34 48 - -
Prci8g1897 500 PRINTS Disease resistance protein signature 282 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1897 Prci-Chr8 17220333 17222960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1897 21 440 WRKY Transcription Factor Family AT4G12020 34.033 1.65e-53 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1897 - - pcin:129317398 1003.43