Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1872 ATGGAGAAACCAGGAGCTGGTGGAAGGCCAAAGGCAGTTGACATATGGGAACACGTCATGGTGTTGGAAGGGAAAAAAGTGAGGTGTAAACATTGTGGATTTGAATTTGCAGCAAGTGCTAATCGCATCAAATCTCATATTCATCAAATCAAGGGTCAGGGAATTCGTCTGTGTACTGCTTTTCCTCAGCTTTGCGATACTGCTTCCAGAAAAGTCACCAACAATTTGAAAGGGAAAGAAGACCTCATTGATTCACAAGATTTATCAACACTGGATAGGGCAAGAGATTATAACAAACCCAGTGAAACAATGATTGAGTGTCACATGTCCCCCAAAACAATGTGGGAAGGGATAAAGGCTCTCCAACAAACACAAATCCATCAAGAGAGGTTTCAAGTTGGCCCTTTCTCTGTTTCTCATATGGTGAATGAACGTGACTTGCAGTTGATACAATATGTTTTTGAACAATCATGTGATGAGACAATTTTCTCCTCACCACCACGTTTATATTTGAATCAATATGAATTTACCACACTTAGACCGCAGACTTGTTTGGATTCTTTGGTAATAGATGTTTTTGTTGATATCTTGACTGACACTGAAAGGAAGAAAAGTAAACTTCTGAATTGGTATCTTCCGCATGTAGCATTCAATAGTGGTGATTTAAGTTTGTTCCTTGACTTTGTTGCACGACATAAAATGGAAGAGAACTACATGCCTGACTCCATATATTTTGAGAAGAATCAAGTTGTTGAAATATGGGATTCTCTTCGCGATCATTTTGTGGATGAAAGTGAACGTCAACAAAGAACAAATAAACTGTTGCTTGCTATGGAGAAACTCTTCGGGGACGTTGCGTTCGCAAAATTTCACCAGAGAATGGCAAGCAATATCTCATTACAGCCTAATGATAATGGATATGATTGTGGTATATTTGTTATTAAATATATGCAACAATCAGATAATTATGTGAGCCAAAATCCTTCATTTCAGTTTGACAGTAATAAAGAAAGATTGGATTTGGCTTTAGAGTTGCTCAAGAGTGACTTAAACCAAGAAAGAGAAATACTATATCATAAAGCAGCAGGAAGCCATTCACAAGTTCTAGGTGAAGAAGATATAGACTCATGTGGAATTAATAGAAAGCAGGTTGACAAATGCAAAACAATATTTGATGTTGGCAAAGGGGCATATATGGAATTGGATGATTCTAATGCTAGAGTCAAGAGAAAAAATGTCAGCTCGAAGACAGGATGTGTTAAAGGTTATGTATTGCCAACAACGGAGTTAGTGGGAGAGAAGTTTCAAAGTTATATCAAGCAACTATGGAAATGGATATCAGAAAAAGAGGTATCAACAATTGGGATATGGGGAATGAGAGGAGCAGGGAAAACAACTTTAGCAACTCATGTGAATAATATGCTTTTAGAAGAAGCCAGTGATACCTTTGACCATGTTATTTGGGTTACTGTATCACAAGATGATAGCATTTATGAGTTGCAAAAGGCCATTGCAAGATCAATCAATTTAGACATATCTGATGAGCATGATGTGAAAAGAATATCTGGGAAATTATTGCAAGCATCCAAACATATAAATAGATATGTGCTTATTTTAGACAATGTTTGGGATCCTATCTTCTTAGAAGAGGAGGTTGGATTTCCTATTTCGAATAATGGGATTAAATTGATCTTGACAACTCGTTCGCGGGAAGTGTGCCAAATAATGAACTGCATGAAGAGCATAATGCAAGTGGAACCATTAAATGAAGAAGATGGTTGGGAATTGTTTAAAGCAACTCTTGGAACCTATATAATACAATTTAGTAAAGTGGAGCCAATAGCAAGGACTGTGGCAAAACAATGTAAGGGTTTGCCCCTTGCAATCGTTAAGATAGCGAGAAGCATGAGGGGAAAAGAACACGAGAGAGAGTGGAGTCGTATGTTGGAATGCCTTCAAAACTTGGACGATGGGCAAAGTGATATGGACAAGTGGGTATTTTCGGTATTGAAATTGAGCTATGCTTGCCCAGATAATAAATTACAAAGATTTTTTTGGCACCCTGCAATAAGTAACAAAGAACATACTTGCGCTTCATGCAAATTGCTCAGACGCCGATGCGCCATAGACTGCATTTTCGCTCCCTATTTCCCTTCCGACGATCCCCAAAGGTTCGCCATCGTTCACATGGTTTTTGGAGCTAGCAACGTCAGGAAAATGTTACAGGAACTTCCGGTGCACCAGAGAACCGAAGCAGTGAGCAGTCTAGTGTATGAAGCTAATGCGAGAGTGAGAGACCCTGTTTATGGTTGTGTTGGGGCCATATCGTACCTGCAAAACCAGGTCTCGGCGCTTCAAATGCAGCTTGCGGTGGCTCAAGCAGAGATACTCTGCATCCAGATGCAGAATGATCCGATGATGCTGACAAACCCAGAAATTGAGGCCCCCCATCACCCCAAGTCCTTCTTTCTCCAAAATGACCTCCCTCAGTATCTCAATTTAACTTCTTCTTGCAATGTACTTCATCGTGATCACTCTCTCAAGAGAGATAGCATCTTTGGACACGACATGTTTCTTGAATAA 2583 0.3953 MEKPGAGGRPKAVDIWEHVMVLEGKKVRCKHCGFEFAASANRIKSHIHQIKGQGIRLCTAFPQLCDTASRKVTNNLKGKEDLIDSQDLSTLDRARDYNKPSETMIECHMSPKTMWEGIKALQQTQIHQERFQVGPFSVSHMVNERDLQLIQYVFEQSCDETIFSSPPRLYLNQYEFTTLRPQTCLDSLVIDVFVDILTDTERKKSKLLNWYLPHVAFNSGDLSLFLDFVARHKMEENYMPDSIYFEKNQVVEIWDSLRDHFVDESERQQRTNKLLLAMEKLFGDVAFAKFHQRMASNISLQPNDNGYDCGIFVIKYMQQSDNYVSQNPSFQFDSNKERLDLALELLKSDLNQEREILYHKAAGSHSQVLGEEDIDSCGINRKQVDKCKTIFDVGKGAYMELDDSNARVKRKNVSSKTGCVKGYVLPTTELVGEKFQSYIKQLWKWISEKEVSTIGIWGMRGAGKTTLATHVNNMLLEEASDTFDHVIWVTVSQDDSIYELQKAIARSINLDISDEHDVKRISGKLLQASKHINRYVLILDNVWDPIFLEEEVGFPISNNGIKLILTTRSREVCQIMNCMKSIMQVEPLNEEDGWELFKATLGTYIIQFSKVEPIARTVAKQCKGLPLAIVKIARSMRGKEHEREWSRMLECLQNLDDGQSDMDKWVFSVLKLSYACPDNKLQRFFWHPAISNKEHTCASCKLLRRRCAIDCIFAPYFPSDDPQRFAIVHMVFGASNVRKMLQELPVHQRTEAVSSLVYEANARVRDPVYGCVGAISYLQNQVSALQMQLAVAQAEILCIQMQNDPMMLTNPEIDXAPHHPKSFFLQNDLPQYLNLTSSCNVLHRDHSLKRDSIFGHDMFLE 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1872 861 FunFam Probable disease resistance protein At1g61300 423 581 - -
Prci8g1872 861 SUPERFAMILY Cysteine proteinases 142 348 IPR038765 -
Prci8g1872 861 ProSiteProfiles LOB domain profile. 695 796 IPR004883 -
Prci8g1872 861 Gene3D Adenoviral Proteinase; Chain A 140 350 - -
Prci8g1872 861 Pfam Lateral organ boundaries (LOB) domain 697 793 IPR004883 -
Prci8g1872 861 PRINTS Disease resistance protein signature 622 636 - -
Prci8g1872 861 PRINTS Disease resistance protein signature 453 468 - -
Prci8g1872 861 PRINTS Disease resistance protein signature 529 543 - -
Prci8g1872 861 Gene3D - 419 585 IPR027417 -
Prci8g1872 861 Coils Coil 336 356 - -
Prci8g1872 861 Pfam NB-ARC domain 438 674 IPR002182 GO:0043531
Prci8g1872 861 Coils Coil 775 795 - -
Prci8g1872 861 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 693 809 - -
Prci8g1872 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 435 686 IPR027417 -
Prci8g1872 861 Gene3D - 587 676 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1872 Prci-Chr8 16751189 16757432 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1872 697 813 AS2 family AT2G30130 82.906 5.38e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci8g1872 NB-ARC 8.9e-49 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1872 - - pcin:129318063 1727.99