Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1870 ATGAGCCATGATGTGAAAAGAATATCCGGGAAATTGGTGCAAGCATCTAAGCATTTAAATAGATGTGTCCTTCTTTTAGATGATGTTTGGGATCCTATCTTTTTAGAAGAAGAGGTTGGATTTCCTGTTTCGAATAATGGGATTAAATTGATTTTGACAACTCGTTCATGGGAAGTGTGCCAAACTATGAACTGCTTGAAGAGCGTAATAGAAGTAGAACCATTAAATGAAGAAGATGGTTGGGAATTGTTTAAAACAACTCTTGGATCCCATATGATGCAATCTAGTGAAGTGGAGCCTATAGCAAGTACTGTGGCTAAACAATGTGAGGGTTTGCCCCTTGCAATTGTTACGATAGCAAGAAGCATGAAGGGAAAAGAAGGGAAAAGAGAATGGAGTCATCTGTTGGAATGCCTTCAAAACTTGGATAAGGGGCAAAGTGATATGGAGGAGAGGGTATTTCCTGTGTTGAAATCTAGCTATGCTTGCTTAAATAATAAATTGCAAAGATTTTTTTTGTACCTTGCATTAACTGGCAAGGAATGTTTTGTTGACAGTAATTTTAGATGTTTGATTAGAAGATTTTTCCATGAGGAATGGATAGATGAGAAAAAGAGCTTGGAGATGCAGTATAATGAAGGTTACACCATGATGAAGAAATTAAAGAATAACAGTTTGCTTATGGAAATATATGATGGGGAATTTTGGATTATGCCCAAATTGCTGAGGGTCATGGCTATTAATATTGTAAAGAAGACTGATGAAATTATGGACAAATCTGATATGAATTTGACAGAAATACCGGAAAATGGTGAATGGCATGAAAATTTGCAAAAAGTTTTTTTGAGCAGAAATGAAATACAGAAAATTGTAGATGGCACATCTCTTAGGTGTTCTAAACTTTCCACATTGCGTTTAGATTGTAATTATGATCTCAAATGGATCCCAGATGATTTTTTCAACAACATGCCTCTCTTAAAGTACTGGATTTGTCTAGGACTGGCATCGAGTGTTTGCCCGAATCCATCTCTAACTTGCAGGATGAGGATTCTGCTGACGTGGGCATTATTATCACACCTCCTCGAGGGCATTTCTGTAATATCTTGCAAGTCGATGGAAGAGATAGTTGGAGAGGATTGTAGCAATGACAATATTCTCCCTACCATCACCCTCCCCAAACTCAGATTTGTGTACTTGTATAAGCTACCAGAATTAAATTCCGTGTTCAGAGGAACCATGCTCTGCCCTTCTCTGAAATCTTTTCATGCCGTCTTTTGTGAGAAACTAAGCCACCCTTCGATAGAAATTGAAGAAGGACATGAGCTTCTGATGAAGAATACCAAGACTGGATACTGTTGGAGCAGTGATGATCAGAACCAATCTGATCAGGAGCTCAAAAATATGGTTGAGAAGGACAGAGAAAAAGAGAACGAGGATGATGAAGAAGAAAAGAAGGAGGAAGAGGAGGAGGAAGAAGAAGAGGATGAGGATGGGGATGGGGAAGAAGAAGAGGATGAGGATGAAGATGGTGAAGAGGACATAAAATTGTGGTTAAAGGCTACTGGCAGTAATTAA 1575 0.3841 MSHDVKRISGKLVQASKHLNRCVLLLDDVWDPIFLEEEVGFPVSNNGIKLILTTRSWEVCQTMNCLKSVIEVEPLNEEDGWELFKTTLGSHMMQSSEVEPIASTVAKQCEGLPLAIVTIARSMKGKEGKREWSHLLECLQNLDKGQSDMEERVFPVLKSSYACLNNKLQRFFLYLALTGKECFVDSNFRCLIRRFFHEEWIDEKKSLEMQYNEGYTMMKKLKNNSLLMEIYDGEFWIMPKLLRVMAINIVKKTDEIMDKSDMNLTEIPENGEWHENLQKVFLSRNEIQKIVDGTSLRCSKLSTLRLDCNYDLKWIPDDFFNNMPLLKYWICLGLASSVCPNPSLTCRMRILLTWALLSHLLEGISVISCKSMEEIVGEDCSNDNILPTITLPKLRFVYLYKLPELNSVFRGTMLCPSLKSFHAVFCEKLSHPSIEIEEGHELLMKNTKTGYCWSSDDQNQSDQELKNMVEKDREKENEDDEEEKKEEEEEEEEEDEDGDGEEEEDEDEDGEEDIKLWLKATGSN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1870 524 MobiDBLite consensus disorder prediction 475 512 - -
Prci8g1870 524 Gene3D - 75 165 IPR042197 -
Prci8g1870 524 FunFam Probable disease resistance protein At5g66910 74 160 - -
Prci8g1870 524 MobiDBLite consensus disorder prediction 454 524 - -
Prci8g1870 524 Gene3D - 1 74 IPR027417 -
Prci8g1870 524 Coils Coil 468 504 - -
Prci8g1870 524 PANTHER DISEASE RESISTANCE PROTEIN RP 15 472 IPR044974 GO:0006952
Prci8g1870 524 SUPERFAMILY L domain-like 256 431 - -
Prci8g1870 524 Gene3D Ribonuclease Inhibitor 249 336 IPR032675 -
Prci8g1870 524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 175 IPR027417 -
Prci8g1870 524 Pfam NB-ARC domain 9 161 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1870 Prci-Chr8 16716403 16720394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1870 21 329 WRKY Transcription Factor Family AT5G45050 23.457 9.44e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1870 - K13459 pcin:129317993 988.793