Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1803 ATGGAACCAAGATTAGGGTTCCCACTTCTCTTCTTGTTGTTAATCTCCCTCTCTTTCAATGCTGAATCGAAGTGTAAGAAAGGATGTGACCTAGCTCTAGCCTCCTACTATGTTTGGGTCGGTTTTTCAAATCTTACGACCCTTTCGCAGATTATGCAATCCCCAATTCTTCAAAATCCTGAAGATATCGTTAGGTATAACGCAGGTCAAGTATCTAGCAAAGATTATGTCCAAACCACCACTCGAGTGAACGTTCCGTTCCCTTGCGATTGCATCGATGGTGAATATTTAGGTTACGTGTTCAAGTACCCGATTCAGAGAGGGGACTCCTATGTGAAGGTTGCGAATCAGAGCTATTCCAATCTGACCACCGCGTCGTGGTTGCAGAGCTTGAATAGCTATCCGCCGAATAATATTCCTAATTCTGGAATGATGAATGTGACGGTGAACTGTTCGTGTGGGGATAGGCAGGTTTCGAAGGAGTACGGTTTGTTCATGACGTACCCGCTTAGAGCTGAGGATTCTTTGGATTCCATTGCGAACCAGACGAAGCTTGATCGGGTGTTGCTGCAGAGATATAATCCTGGTGTTAATTTCAGCAGAGGGAGCGGCCTGGTATATATCCCAGGAACAGACCTGAATGGTGCCTATGTGCCTCTGCCCCTAAGCCCGAAAGGTCTAAAAGGTGGGGCTGTTGCTGGAGTATCTGCTGGAGCAGTTATTGGGGTTGTGCTATTGACAGTCTGTTCGTGTCTTGTGTATTACCAAAGGAAGAACGAGGAGGAGGAAAAGCTGCTTTCAAAATTAGTACTAAACTCTGCTCAACCAGATTCCAATGGTCCTCCTGATACTAGTTTCAAAGGTATTACTGTGGACAAATCAGTGGAGTTCTCATATGGAGAACTAGCTCAAGCCACAAATAACTTCAGTATGGCAAATAAAATTGGCCAAGGTGGTTTTGGGGCTGTCTACTATGCAGCGTTGAGAGGCGAGAAAGCTGCAGTAAAGAAGATGGAGTCGCAAAAGTCACGAGAGTTTCTTGCTGAATTGAAAGTGTTAGCACGTGTTCATCACCTAAACCTGGTACGCTTGATTGGATATTGTGTTAAGAAGGATTATCTATTCCTGGTATATGAATACATTGACAATGGAAACTTAAGCCAACACCTGCGAGGTTCAGGCAGAGAACCCTTGTCATGGTCTACAAGGGTGCAGATTGCTTTGGATTCCGCCAGAGGTCTTGAATACATTCACGAGCATACTGTGCCTGTTTATATTCATCGTGACATAAAGTCTGCTAATATATTGATAGACAGAATCTTCCGTGCGAAGGTTGCAGATTTTGGGCTAACCAAGCTCACTGAAGTTGGAAGTTCAGCACTTCCTACTGACAATCTTGCTGGCACATTTGGTTATATGCCACCTGAATATGCATATGGTAGTGTTTCGCCAAAAATTGATGTCTTCGCTTTCGGAGTAGTGCTCTGTGAACTCATTTCTGCTAAAGAAGCCTTGTGCAGGGACGGTGAAGCTGGTTCTGAAACAACAAAAGGCCTCGTCTCTTTGTTTGATGAAGCTTTTGAGCAGCCTAATCCTAAAGAACATCTTCAAAAGCTTGTTGACCCTAGGCTTGGAGACCAATACGCAATCGATGCAGTTTACAAGATGGCACAGCTGGCTAAGGTGTGCACAGATGGAGAACCGGAGCGACGTCCAAGTATGAGATCTGTTGTAGTGGCTCTAATGACACTTTCTTCTTCTACTTCTGTGGAATGGGATATTACCTCCTTGTATGAAAATCCAACATTCACAAACATGTCCGCAAGGTAG 1830 0.4448 MEPRLGFPLLFLLLISLSFNAESKCKKGCDLALASYYVWVGFSNLTTLSQIMQSPILQNPEDIVRYNAGQVSSKDYVQTTTRVNVPFPCDCIDGEYLGYVFKYPIQRGDSYVKVANQSYSNLTTASWLQSLNSYPPNNIPNSGMMNVTVNCSCGDRQVSKEYGLFMTYPLRAEDSLDSIANQTKLDRVLLQRYNPGVNFSRGSGLVYIPGTDLNGAYVPLPLSPKGLKGGAVAGVSAGAVIGVVLLTVCSCLVYYQRKNEEEEKLLSKLVLNSAQPDSNGPPDTSFKGITVDKSVEFSYGELAQATNNFSMANKIGQGGFGAVYYAALRGEKAAVKKMESQKSREFLAELKVLARVHHLNLVRLIGYCVKKDYLFLVYEYIDNGNLSQHLRGSGREPLSWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDRIFRAKVADFGLTKLTEVGSSALPTDNLAGTFGYMPPEYAYGSVSPKIDVFAFGVVLCELISAKEALCRDGEAGSETTKGLVSLFDEAFEQPNPKEHLQKLVDPRLGDQYAIDAVYKMAQLAKVCTDGEPERRPSMRSVVVALMTLSSSTSVEWDITSLYENPTFTNMSAR 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1803 609 Pfam Protein kinase domain 311 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1803 609 SMART serkin_6 309 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1803 609 FunFam PTI1-like tyrosine-protein kinase 3 381 596 - -
Prci8g1803 609 FunFam LysM receptor kinase 2 288 380 - -
Prci8g1803 609 Gene3D Transferase(Phosphotransferase) domain 1 381 598 - -
Prci8g1803 609 ProSiteProfiles Protein kinase domain profile. 309 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1803 609 SUPERFAMILY Protein kinase-like (PK-like) 283 581 IPR011009 -
Prci8g1803 609 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 595 IPR044812 GO:0019199|GO:0045087
Prci8g1803 609 CDD STKc_IRAK 315 578 - -
Prci8g1803 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Prci8g1803 609 Gene3D Phosphorylase Kinase; domain 1 282 380 - -
Prci8g1803 609 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1803 Prci-Chr8 15421482 15433033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1803 1 609 Receptor kinase-like Gene Family AT3G21630 55.024 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci8g1803 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1803 - K13429 gmx:100803042 756.133