Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1802 ATGGTACCCAGAATTGGGTTTCCACTTATCTTGTTGATGTTATTGTTATTCTCTCTTTGTTTCAATGCAGAATCGAAGTGCAAGAAACGATGCGACTTGGCTTTAGCCTCCTACTATATTTCGGACCAACTTGACAATCTTACCTTCCTTTCGAAGATTATGCAATCACCTCTTGTTGAAAAGCCTGATGATATCGTCAGCTATAACAAAGGCGTGCTAACTAGCCAAGACTTTATCCCAAGTAACACTCGAGTGAACGTTCCGTTCCCTTGCGATGATTGCATCGATGGTGAATATCCAGGTTACGTATTTAAGTACCCAATTCAGAAAGAGGACACCTATATGAAGATTGCGAATCAGACTTATTCCAATTTGACCACTGTTTCGTGGTTGGAGAGCGTGAATAGCTTTTCGCCGAACAATATTCCTGATTATGGAACGCTGAATGTGACTGTGAACTGTTCGTGTGGGGATAGCCGCGTTTCGAAAGAGTATGGGTTGTTCATCACGTACCCGCTTAGAGCTGAGGATTCTTTGGATTCAATTGCGAACCAGGTGAAGCTTGATCCGCAGTTGCTCCAAAGTTACAATCCTGGTGTTGATTTCAACCAAGGGAGTGGTTTAGTGTACATACCGGGAAGAGACCAAAATGATGTCTATGTGCCACTGCCACCTAGCTCAAAAGGTTTGACCATCTCTCTCCTGAGAAAGCTACTTTGATCTGATATAATTTCTAAATAAGCAGGTCTAAAGGGCCGGGCTATTGCTGGATTATCTGCTGGAGCAGTAGCTGTGGTTCTCTTATTGGCAGCTTGTATTTATGTTGTATATCACCATAAGAAGAAGGAGGAGGAGCAAGAATTGCTTTCAGGAGGATTAGCAGTCCACTCTGCTCAACGTGGGAATGTTTCAAATGGTCCACCTGCTGGCACTACTGTGGACAAATCAGTGGAGTTCTCGTATGAAGAACTAGCTCAAGCCACAGATAACTTCAGTATGGCAAATAAAATTGGTCAAGGTGGTTTTGGGGCTGTGTACTATGCAGAGCTGAGAGGCGAGAAAGCTGCAGTAAAAATGATGGAGTCGCAAAAATCGAAAGAGTTTATCGCTGAATTGAAAGTGTTAACACATGTTCATCACCTGAACCTGGTACGCTTGATTGGATATTGTGTTAAGAAGGGTTCTCTCTTCCTGGTATATGAATACATTGACAATGGAAACTTAAGCCAACACCTGCGAGATGCAAGGAGAGACCCCTTGCCATGGTCTACTCGGGTGCAAATTGCTTTGGATTCAGCTAGAGGTCTTGATTACATTCACGAGCATACGAAGCCTGTATATATTCATCGGGACATAAAGCCAGCTAATATTTTGATAGACAGAAACTTCCGTGCAAAGGTTGCAGATTTTGGGTTAACCAAGCTCACTGAAGTGGGAAGTTCATCACTTCCCACCGGCAATCTCGCAGGCACATTTGGTTATATGCCACCTGAATACGCATTTGGCAGTGTTACGCCAAAAATTGATGTCTTTGCTTTTGGAGTTGTCCTCTATGAACTCATATCTGCTAGAGAAGCCGTGTTTAGGACTGGCGGAGCTGGTTCTGAAACAACGAAAGGCCTTGTCTCTTTGTTTGATGAAGCTTTTGAGCAGCCTGACCCAAAAGAACGTCTTCAAAAGCTTGTAGATCCTAGGCTCGGCGACCATTATACAATCGATTCAGTTTGCAAGATGGCACAATTAGGCAAAGCGTGCACAGAAACAGACCCAGAGCGACGTCCAAGCATGAGATCTGTTGCAGTGACTCTAATGAGTCTTTCTTCTACTTCTGTGGAATGGGACATTGCCTCCTTGTATGAAAATCCAGCACTCACAAATATGATGTCTGGAAGGTAA 1896 0.4362 MVPRIGFPLILLMLLLFSLCFNAESKCKKRCDLALASYYISDQLDNLTFLSKIMQSPLVEKPDDIVSYNKGVLTSQDFIPSNTRVNVPFPCDDCIDGEYPGYVFKYPIQKEDTYMKIANQTYSNLTTVSWLESVNSFSPNNIPDYGTLNVTVNCSCGDSRVSKEYGLFITYPLRAEDSLDSIANQVKLDPQLLQSYNPGVDFNQGSGLVYIPGRDQNDVYVPLPPSSKGLTISLLRKLLXSDIISKXAGLKGRAIAGLSAGAVAVVLLLAACIYVVYHHKKKEEEQELLSGGLAVHSAQRGNVSNGPPAGTTVDKSVEFSYEELAQATDNFSMANKIGQGGFGAVYYAELRGEKAAVKMMESQKSKEFIAELKVLTHVHHLNLVRLIGYCVKKGSLFLVYEYIDNGNLSQHLRDARRDPLPWSTRVQIALDSARGLDYIHEHTKPVYIHRDIKPANILIDRNFRAKVADFGLTKLTEVGSSSLPTGNLAGTFGYMPPEYAFGSVTPKIDVFAFGVVLYELISAREAVFRTGGAGSETTKGLVSLFDEAFEQPDPKERLQKLVDPRLGDHYTIDSVCKMAQLGKACTETDPERRPSMRSVAVTLMSLSSTSVEWDIASLYENPALTNMMSGR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1802 631 FunFam LysM receptor kinase 2 310 402 - -
Prci8g1802 631 SUPERFAMILY Protein kinase-like (PK-like) 308 603 IPR011009 -
Prci8g1802 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Prci8g1802 631 Gene3D Phosphorylase Kinase; domain 1 306 402 - -
Prci8g1802 631 Gene3D Transferase(Phosphotransferase) domain 1 403 618 - -
Prci8g1802 631 ProSiteProfiles Protein kinase domain profile. 331 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1802 631 SMART serkin_6 331 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1802 631 FunFam PTI1-like tyrosine-protein kinase 3 403 617 - -
Prci8g1802 631 Pfam Protein tyrosine and serine/threonine kinase 333 601 IPR001245 GO:0004672|GO:0006468
Prci8g1802 631 ProSitePatterns Protein kinases ATP-binding region signature. 337 358 IPR017441 GO:0005524
Prci8g1802 631 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 616 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1802 Prci-Chr8 15410849 15418312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1802 4 631 Receptor kinase-like Gene Family AT3G21630 51.994 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci8g1802 PK_Tyr_Ser-Thr 8.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1802 - K13429 gmx:100803042 755.362