Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1801 ATGGAACCCAGATGTGGATTTGTCGCTTTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCTTTGCTTCAGTTTTTCCCAGTGCAGAGTCCAAGTGCAGCAAGGGCTGTGATTTAGCTCTAGCTTCTTACTACGTCTGGCCAGGTTCTAATCTCTCATTAATCGCACAACTTATGCGATCGCAGCTTGTGACAGATGAAAACGTCATCGTCAGCTACAACAAAGACCAAACAATCAGCAGAGATTATGTCCAATCCACTACAAGAATCAATATTCCATTCCCATGTGATTGTCTTGATGGTGAATTTCTGGGTCATATGTTTCAGTACGGGATTAACCAAGGGGATAACTACACGGAAGTTGCTGAGACGTATTATTCAAATTTGACCACAGTTGATATGTTGCGGAAGTTCAATGGCAACACTATGCCTGAAAATGGAACACTTAATGTTGCCGTTAACTGTTCTTGTGGTAACAGAGAAGTTTCAACTCTCTATGGATTGTTCATCACTTGGCCACTTAGGCCTGAGGATACTTTGGAGTCAATTGCCAATAATGAGAAACTTGATGCTGCGTTGCTACAGAGCTATAATCCGGGCGTGAATTTCAGCCAAGGGAGTGGATTGGTTTATATACCAGGCAAAGATCAAAATGGAATCTACGTTCCAATGGAGTCTAGTTCCGGATCAGGTCTATCTGGTGGGGTTATTGGTGGAATATGTATTGGAGTAGTAGCTGGGCTTCTGCTGCTGGCAGTTTCTATGTATTTTGTACATTTCCAAAAGAAGAAAGACGACACGGAACCACTCTCTCAAGATTTCCAAGAGTTCTCTGTTCAAGAAGGGAAGGGATATGGTGGTCCTACTGGCATCACAGTAGACAAATCAGTGGAGTTTTCATATGAAGAACTAGCTGCTGCCACAGATAACTTCAGTATGGCTAAAAAAATTGGTCAAGGAGGCTTTGGTGCTGTCTATTATGCAGAGCTGAGAGGCGAGAAAGCCGCAATCAAGAAGATGGATATGCAAGCAACGAGAGAATTTCTAGCCGAATTGAAAGTCCTTACAAACGTTCATCACCTTAACCTGGTGCGCTTAATTGGATATTGCACTGAGCGCTCTCTTTTCCTTGTTTATGAATACATTGATAATGGAAACTTAAGTGAACATCTGCGCGACTCAGGAAGAGATCCGCTGCCATGGTCTATCCGTGTTCAAATTGCATTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTTCCTGTGTATATCCACCGTGACATAAAGTCAGCAAATATATTGATAGATAATAAATTCCATGGGAAGGTTGCAGATTTTGGATTAACTAAACTGACTGAAGTGGGGAATGCGTCACTTCCAACCGGTCATCTTGTGGGAACTTTCGGATACATGCCTCCAGAATACGCTCAGTATGGTGATGTCTCTCCTAAGGTAGATGTCTACGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCTGCCAAGGAAGCCATTGTCAGGACAACTCAATCTGATGCTGACTCAAAGGCCCTTGTAACAATGTTTCATGAAGTTCTTGAGCAGCCTGACCCTACGGAAGATCTTTGCAAATTGGTTGACCCAAGGCTGGGGAATGACTACCCTATTGACTCAGTTTTGAAAATGGCTCAACTTGCAAGAGCATGCACGCTAGAGTATCCCCAACTGCGTCCAACTATGAGATCTATTGTAGTTGCTCTCATGACACTTTATTCTTCCACTACTAATGATTGGGATGTCCAGGCCTTCTACAATAATCCGAATCCCATGAATCTGATGTCAGGAAGATAG 1833 0.4255 MEPRCGFVAFFFFFFFFIFFFASVFPSAESKCSKGCDLALASYYVWPGSNLSLIAQLMRSQLVTDENVIVSYNKDQTISRDYVQSTTRINIPFPCDCLDGEFLGHMFQYGINQGDNYTEVAETYYSNLTTVDMLRKFNGNTMPENGTLNVAVNCSCGNREVSTLYGLFITWPLRPEDTLESIANNEKLDAALLQSYNPGVNFSQGSGLVYIPGKDQNGIYVPMESSSGSGLSGGVIGGICIGVVAGLLLLAVSMYFVHFQKKKDDTEPLSQDFQEFSVQEGKGYGGPTGITVDKSVEFSYEELAAATDNFSMAKKIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCTERSLFLVYEYIDNGNLSEHLRDSGRDPLPWSIRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDNKFHGKVADFGLTKLTEVGNASLPTGHLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLFELISAKEAIVRTTQSDADSKALVTMFHEVLEQPDPTEDLCKLVDPRLGNDYPIDSVLKMAQLARACTLEYPQLRPTMRSIVVALMTLYSSTTNDWDVQAFYNNPNPMNLMSGR 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1801 610 Gene3D Transferase(Phosphotransferase) domain 1 381 600 - -
Prci8g1801 610 FunFam PTI1-like tyrosine-protein kinase 3 381 596 - -
Prci8g1801 610 Pfam Protein tyrosine and serine/threonine kinase 311 579 IPR001245 GO:0004672|GO:0006468
Prci8g1801 610 Gene3D Phosphorylase Kinase; domain 1 287 380 - -
Prci8g1801 610 ProSiteProfiles Protein kinase domain profile. 310 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1801 610 SUPERFAMILY Protein kinase-like (PK-like) 292 581 IPR011009 -
Prci8g1801 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Prci8g1801 610 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 15 595 IPR044812 GO:0019199|GO:0045087
Prci8g1801 610 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Prci8g1801 610 SMART serkin_6 310 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1801 610 FunFam LysM receptor kinase 2 289 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1801 Prci-Chr8 15398837 15405905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1801 13 610 Receptor kinase-like Gene Family AT3G21630 56.472 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci8g1801 PK_Tyr_Ser-Thr 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1801 K13429 - qlo:115955492 783.867