Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1800 ATGTATTTGCCTCTATATGATCGAGCAGGTCTAAATGGAGTTACTATTGGTGGAATAAGCGTTGGAGCAACATTTGGGTTTCTGTTGTTAGCAGGTTATGTCTTTGTCAGACATTCCCAAAGAAAGACAGCGAAAGTGGCTTTGTTTACAGAAAATTCCATAGAACTCTCAAATCAAGACGAATCTGGAAGTGTTGTTTATGAAACTTCAGGATCTAGTGGTTCTGCTAGTGCTACTGGTCTTATAGGTATCATGGTTGGAAAATCAGTGGAGTTCTCATATCAAGAAATAGCCAAAGCTACCAACAACTTCAGCTCCAATAACAAGATTGGTCAAGGAGGTTTCGGAGCAGTATATTATGCTGAGCTAAGAGGCCAGAAAACTGCGATCAAGAAGATGGATATAGAAGCATCACAAGAGTTTCTTGCTGAGTTGAAGGTTTTAACACATGTTCATCATTTGAATCTGGTGCGTTTGATCGGATACTGTGTGGAGGGATCGCTTTTCCTTGTTTATGAATACATTAATAATGGAAACTTAAGCCATCATTTGCGTTCCTCAGATCCATTGCCATGGTCAACAAGGGTGCAAATTGCTCTTGATTCAGCAAGAGGTCTTGAATATATTCATGAACATACAGTGCCTGTATATATCCATCGTGACGTCAAGTCTTTGAATATATTAATCGACAAAAGCTTCCATGCGAAGGTGGCAGATTTTGGGTTAAGCAAACTCATTGAAGTTGGAAATGCATCGCTTAACACTCGTCTTGTGGGAACATTCGGATATATGTCTCCAGAGTATGCTCAATATGGTATAACATCTCCAAAAATAGATGTATATGCTTTTGGGGTTGTACTTTATGAACTCATTTCTGCTAAGAATGCTGTCCTTAAGACTGGTGATCAATCTGTTGCTGAATCCAAGGGCCTTGTATCTCTGTTTGAGAAATCTCTTCGAAGGCCTGACGCTGTTGATGATCTTCGCAACCTTGTGGATCCTCGACTTGGAGAAAACTACCCCATTGAGTCAGTTTTTAAGATGGCCCAGCTTGCTAGAGCTTGTACACAAGATGATCCACAGCTACGTCCTACTATGAGATCTATTGTTGTTGCTCTTATGACACTTTCATCTTCTGATGATCAGGATTGTGATGTCGCCTTTGACCTCCCTGATAACCAAACCATCATAAATCTACTCTCTGGAAGATAA 1212 0.4026 MYLPLYDRAGLNGVTIGGISVGATFGFLLLAGYVFVRHSQRKTAKVALFTENSIELSNQDESGSVVYETSGSSGSASATGLIGIMVGKSVEFSYQEIAKATNNFSSNNKIGQGGFGAVYYAELRGQKTAIKKMDIEASQEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYINNGNLSHHLRSSDPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDVKSLNILIDKSFHAKVADFGLSKLIEVGNASLNTRLVGTFGYMSPEYAQYGITSPKIDVYAFGVVLYELISAKNAVLKTGDQSVAESKGLVSLFEKSLRRPDAVDDLRNLVDPRLGENYPIESVFKMAQLARACTQDDPQLRPTMRSIVVALMTLSSSDDQDCDVAFDLPDNQTIINLLSGR 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1800 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Prci8g1800 403 SUPERFAMILY Protein kinase-like (PK-like) 84 373 IPR011009 -
Prci8g1800 403 ProSiteProfiles Protein kinase domain profile. 104 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1800 403 FunFam PTI1-like tyrosine-protein kinase 3 175 386 - -
Prci8g1800 403 Gene3D Phosphorylase Kinase; domain 1 80 174 - -
Prci8g1800 403 SMART serkin_6 104 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1800 403 Gene3D Transferase(Phosphotransferase) domain 1 175 394 - -
Prci8g1800 403 FunFam LysM receptor kinase 2 83 174 - -
Prci8g1800 403 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 386 IPR044812 GO:0019199|GO:0045087
Prci8g1800 403 Pfam Protein tyrosine and serine/threonine kinase 107 372 IPR001245 GO:0004672|GO:0006468
Prci8g1800 403 ProSitePatterns Protein kinases ATP-binding region signature. 110 132 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1800 Prci-Chr8 15384165 15390790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1800 10 403 Receptor kinase-like Gene Family AT3G21630 58.291 9.46e-152 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci8g1800 PK_Tyr_Ser-Thr 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1800 - K13429 gmx:100776847 543.888