Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1799 ATGACAAAAAGACAAAGCTTTCGTTTAGGGCTTTCATCAGAAACACAGAAAACCCAGCTTCGTTTTGTATATACAGCTTTCTCATTTCTCCTCTCTGATCCAATAATGAAACCCAAAAACAATGTTTTCAAACTAGTGTTCCTCCTTGTGTTGTTAGAAACATCAACTTTTCTCCTCAACAACGTAGAATCCAAGTGTCTCCAAGGATGTCCTTTAGCTTTAGCATCCTACTACGCTCGAAAAACCACTCTCAATAATATAATTAAACAGTATCTGAGATCAGATCTTGTTTCATCATACCAAGTTGTTTCCAGCTACAACAAACAAACGGTACTGAATGGAATCTACATTCAAGCCTTCACTAGAATCAACATTCCATTCCCTTGTGATTGTATCAATAATGGGGATTTTCTGGGTCATGTGTTTGAGTACACAATAGTAAAAGGAGATACTTATGATTCCATTGCGACAAAAAAATATGCTTCGTTGACCACAGTGGATTTACTGAGAAGATTCAATAATTATAGTGATCCAGATAATCTTCCTCTCAAGGGGAAGCTTAATGTCACTGTGAATTGTTCTTGTGGGAACAGACAGGTTTCTAAGGACTATGGATTGTTCATTACTTATCCACTTAAGATTGGAGATAGCTTGCAATCTATTGTGAACCAGACTGGTCTTGATGCAACGTTGCTTCAGAGTTACAATCCTGGTGTGAATTTCAGCCAGCAGAGTGGTGTGGTTTTTATTCCAGGAAAAGATCAAAATGGAAATTACGTGTCCCTCGACCCAAGGTATATATCTTCAGGTCTAAATGGAGTTACTATTGGTGGAATAAGCGTTGGAGCAACATTTGGGTTTCTGTTGTTAGCAGGTTATGTCTTTGTCAGACATTCCCAAAGAAAGACAGCGAAAGTGGCTTTGTTTACAGAAAATTCCATAGAACTCTCAAATCAAGACGGGAAACTTTCAGAATCTGGAAGTGTTGTTTATGAAACTTCAGGATCTAGTGGTTCTGCTAGTGCTACTGGTCTTATAGGTATCATGGTTGGAAAATCAGTGGAGTTCTCATATCAAGAAATAGCCAAAGCTACCAACAACTTCAGCTCCAATAACAAGATTGGTCAAGGAGGTTTCGGAGCAGTATATTATGCTGAGCTAAGAGGCCAGAAAACTGCGATCAAGAAGATGGATATAGAAGCATCACAAGAGTTTCTTGCTGAGTTGAAGGTTTTAACACATGTTCATCATTTGAATCTGGTGCGTTTGATCGGATACTGTGTGGAGGGATCGCTTTTCCTTGTTTATGAATACATTAATAATGGAAACTTAAGCCATCATTTGCGTTCCTCAGATCCATTGCCATGGTCAACAAGGGTGCAAATTGCTCTTGATTCAGCAAGAGGTCTTGAATATATTCATGAACATACAGTGCCTGTATATATCCATCGTGACGTCAAGTCTTTGAATATATTAATCGACAAAAGCTTCCATGCGAAGGTGGCAGATTTTGGGTTAAGCAAACTCATTGAAGTTGGAAATGCATCGCTTAACACTCGTCTTGTGGGAACATTCGGATATATGTCTCCAGAGTATGCTCAATATGGTATAACATCTCCAAAAATAGATGTATATGCTTTTGGGGTTGTACTTTATGAACTCATTTCTGCTAAGAATGCTGTCCTTAAGACTGGTGATCAATCTGTTGCTGAATCCAAGGGCCTTGTATCTCTGTTTGAGAAATCTCTTCGAAGGCCTGACGCTGTTGATGATCTTCGCAACCTTGTGGATCCTCGACTTGGAGAAAACTACCCCATTGAGTCAGTTTTTAAGATGGCCCAGCTTGCTAGAGCTTGTACACAAGATGATCCACAGCTACGTCCTACTATGAGATCTATTGTTGTTGCTCTTATGACACTTTCATCTTCTGATGATCAGGATTGTGATGTCGCCTTTGACCTCCCTGATAACCAAACCATCATAAATCTACTCTCTGGAAGATAA 2004 0.3927 MTKRQSFRLGLSSETQKTQLRFVYTAFSFLLSDPIMKPKNNVFKLVFLLVLLETSTFLLNNVESKCLQGCPLALASYYARKTTLNNIIKQYLRSDLVSSYQVVSSYNKQTVLNGIYIQAFTRINIPFPCDCINNGDFLGHVFEYTIVKGDTYDSIATKKYASLTTVDLLRRFNNYSDPDNLPLKGKLNVTVNCSCGNRQVSKDYGLFITYPLKIGDSLQSIVNQTGLDATLLQSYNPGVNFSQQSGVVFIPGKDQNGNYVSLDPRYISSGLNGVTIGGISVGATFGFLLLAGYVFVRHSQRKTAKVALFTENSIELSNQDGKLSESGSVVYETSGSSGSASATGLIGIMVGKSVEFSYQEIAKATNNFSSNNKIGQGGFGAVYYAELRGQKTAIKKMDIEASQEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYINNGNLSHHLRSSDPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDVKSLNILIDKSFHAKVADFGLSKLIEVGNASLNTRLVGTFGYMSPEYAQYGITSPKIDVYAFGVVLYELISAKNAVLKTGDQSVAESKGLVSLFEKSLRRPDAVDDLRNLVDPRLGENYPIESVFKMAQLARACTQDDPQLRPTMRSIVVALMTLSSSDDQDCDVAFDLPDNQTIINLLSGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1799 667 FunFam PTI1-like tyrosine-protein kinase 3 439 650 - -
Prci8g1799 667 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 53 650 IPR044812 GO:0019199|GO:0045087
Prci8g1799 667 Gene3D Transferase(Phosphotransferase) domain 1 439 658 - -
Prci8g1799 667 Pfam Protein tyrosine and serine/threonine kinase 371 636 IPR001245 GO:0004672|GO:0006468
Prci8g1799 667 Pfam LysM domain 144 182 IPR018392 -
Prci8g1799 667 ProSiteProfiles Protein kinase domain profile. 368 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1799 667 FunFam LysM receptor kinase 2 347 438 - -
Prci8g1799 667 Gene3D LysM domain 142 200 IPR036779 -
Prci8g1799 667 SUPERFAMILY Protein kinase-like (PK-like) 348 637 IPR011009 -
Prci8g1799 667 Gene3D Phosphorylase Kinase; domain 1 344 438 - -
Prci8g1799 667 SMART serkin_6 368 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1799 667 ProSiteProfiles LysM domain profile. 142 189 IPR018392 -
Prci8g1799 667 CDD LysM 144 181 IPR018392 -
Prci8g1799 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Prci8g1799 667 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1799 Prci-Chr8 15384165 15392426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1799 62 667 Receptor kinase-like Gene Family AT3G21630 53.734 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci8g1799 PK_Tyr_Ser-Thr 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1799 - K13429 gmx:100776847 764.222