Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1789 ATGTCTGAAGCTGAGGACATTGCTGTTCAAGGAAAATATGGAAGAGGGTGCCATTGCGTAAAGTCAAATTGTTCAAATGGATATTGCCCTTGTCACAAGAGAAAAGCTGGATGTTCAGGTACATGCCGATGTGAAATTTGTGATAATTACTACGGCAGCAAAAACGCTCAAAGAATGAAATTATCAGAAGATATGATCTATGAAATATTTTCCTGGCTCCCAGCAAAATCAATATGCAGATTCAAGTCTTGTTCCAAGTCCATCTATAAGTTGACACAAGAAACATACTTTGCCTTGAAGCAATCTCAACATTCCATGACTATGAATGATTCTTGCCTCTTTATTCAGCCATATGAGCATTATTTTTTGGAATCATTCAAAACTGAACCATATGCATTGCCTGGAGAGGAGAAACTTTCTGGCGCTCCGAAAGATTTCCTTCGGTTTCTTTCTCAAACGTGTTTGAAAATTCTAGCCTCTAGTAATGGTTTGCTTCTCTGTCAAAGACTAACAACAAAAGAAAAACAACTATATGTCTGTAATCCTATTACAAAATCATGCTTGGACATTCCCTTCCCAACCAACTTGATAGAAGATACTGGTTCTGATGAGGTGAAATTCTTATTAGAATGTGATGATGATGAAGAGGAATACAAGATCATTCTTGTTGAGTATACCGATTCAAGTTATAAGTGCAAAACTTTTATGCCAAAAGAAGGTGTTTGGAAATCAAGAGGAGGAGGCTTCTTTGATAGAACGTTTTGTGGATACCACAACATATGTGACCCTCCTTTAATCCAGAAGGGAGCCATTCACTTAATGATAAATAGTGAATATTATACTCCAGAAAGTATGACAATACACCACCTTGCGAGTGGCTCATCAAGATTCCTTGGACTTCCATTAGAAGCCTTTGAGTATCCTGGTCCATACATTTATTTGGAACTTGGGATTTTCAAGTGGGGCAAAGTTTATGATGAGTCAATTTGTTTTGTGACATTATTCGAGGATTTAATTTTTAGCATATGGGTGTAG 1035 0.371 MSEAEDIAVQGKYGRGCHCVKSNCSNGYCPCHKRKAGCSGTCRCEICDNYYGSKNAQRMKLSEDMIYEIFSWLPAKSICRFKSCSKSIYKLTQETYFALKQSQHSMTMNDSCLFIQPYEHYFLESFKTEPYALPGEEKLSGAPKDFLRFLSQTCLKILASSNGLLLCQRLTTKEKQLYVCNPITKSCLDIPFPTNLIEDTGSDEVKFLLECDDDEEEYKIILVEYTDSSYKCKTFMPKEGVWKSRGGGFFDRTFCGYHNICDPPLIQKGAIHLMINSEYYTPESMTIHHLASGSSRFLGLPLEAFEYPGPYIYLELGIFKWGKVYDESICFVTLFEDLIFSIWV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1789 344 Pfam F-box domain 61 93 IPR001810 GO:0005515
Prci8g1789 344 ProSiteProfiles CRC domain profile. 1 52 IPR005172 -
Prci8g1789 344 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 15 50 IPR005172 -
Prci8g1789 344 SMART CXC_2 12 53 IPR033467 -
Prci8g1789 344 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 61 279 - -
Prci8g1789 344 SUPERFAMILY F-box domain 60 130 IPR036047 GO:0005515
Prci8g1789 344 SMART fbox_2 61 101 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1789 Prci-Chr8 15331719 15336274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1789 3 68 CPP Transcription Factor Family AT3G22780 37.879 9.71e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Prci8g1789 F-box 2.5e-05 CL0271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1789 - - pcin:129317372 731.48