Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1768 ATGGATGCTACTGTTGAAGCTGCCCGTTCTTCCTATTTCTTGAAGTCGTCAATCCTGCCATGGAAGTATCATGTTTTCTTGAGCTTTAGGGGAGAAGACACTCGAAAAGGCTTCACAGCTCATTTACATGATGCTCTTCGACAAAGGGGTATCATAACCTTCATAGATGACGAGCTTCGCAGAGGAGACGTTATTTCCTTTCAACTCGTCCGAGCAATCCAAGATTCTCTCATCTCTATTGTTATTCTTTCGCAGAACTATGCTTCATCAACTTGGTGTTTGGATGAACTCCAAAAGATTCTTGAATCTAAAGAATCTCTAGGTAGAGAAGTTTTTCCGGTGTTCTATAACGTAGATCCATCTGATGTGCGGCAGCAAAGAGGAACATTCGCAGAGGCTTTTCAAAAGCATAGTGAGAGATTTCATGAACATGAAGGGAAGGCACAGAGATGGAGAAATAACTTGAAAGATGTTGCAAATTTATCTGGCTATCACTCTAAGAATAAGCTTGACCCAAAATTCATTGAAGAAATTGTCAAAGGTGTATGGACAAAACTACAACATGTCCTGCCTAGTTACAAAACCAACAAATTTGTTGGAATGGAGTCAAAGATAAAAGAGGTTAATTTGATTTTAAAGATGGGACTCAATGATGTTCGCCTATTAGGAATATGGGGAATGGGCGGTATAGGAAAAACATCTCTTGCAAGAGTTATCTATGAAACAAGCTATTATCAGTTTGATCTTTGTTATTTTTTTGCTGATGTTAGGGATGTTTTTGAAAAGGAAGGATTAGTTCCCCTACAAAAAAGATTTCTTTCACATAATGGGAAGCTGAAAGGAATAGAATTTGATGATGCATATGATGGAATGAAGAAAATAATAAGCATTCTATGCAACCAAAAGGTTTTGATAGTGCTTGATGATGTAAGTGACATGAGCCAACTTGAGTACCTTGCTATAAAGCAAGCTTGGTTAGGTATAGGAAGTAGAGTAATAGTCACTACTAGGAATAAGCAGCTATTGGTAGCTCATGGAGAATTTGAAATTCACGTGGCACAATGTTTAAATGATGAGGAATCTCTTCAACTCTTTTGTCAGAAGGCTTTTAAAAGTGATAAACCAAAAGAAGATTATTTGGAGCTGTCAAATAACGTGGTTAAATTGGCTGCTGGCCTTCCTTTGACACTTGAAGTGTTGGGTTGTCATCTGTATGGAAGAAACATAGTTGAGTGGAAAGATGCTTTGGAGAAAATAAAGAAATTTCCACCAAATGACATTCTAAAGAGACTTCGAATAAGTTATGAAGCATTAGATCCAATGGAAAAAAAAATATTTTTGGATATTGCATGCTTCTTCAAAGGAATGCACAAAAGTAAAGTGATGGAAATATTAGAAATTTGTGGTTTTCACCCTATCATTGGTATCAAAACACTTGTTGACAAATGCTTGTTAATTGAATATGAAGACGATCATGACCCATCTTTAGGCATGCATGATTTGTTACAAGAAATCGGTAAAAGTATTGTTTTGGAAGAATCAATTAAGGATGCTAGTAAACGAAGTAGGTTATGGTCGATAGAGGATATTATTCATGTATTGACAAAAAATAAGGGAATTGGCTTTATTGAGATTATACAGCTTGTATCATCTATGAAATGCAAAACAAGTTGGGGTCCTGAAGCATTCTCAATTATGTATAATCTTAGAATACTCATAATCAGATCGTGTGATGTGTGCCTCCCTTTGGGACTTGAATGCTTTCCTAGTTCATTGAAAATTCTTGAATGGGAGAAATATCCATTAAAATCCCTCCCACTTGGTGTTCATCCGCATGAACTTGTGCAAATCAAAATGCATCATAGTAAAATCACAAAACTTTGGAATGAAGCCCAGGATCGGGTAGTATAA 1911 0.3637 MDATVEAARSSYFLKSSILPWKYHVFLSFRGEDTRKGFTAHLHDALRQRGIITFIDDELRRGDVISFQLVRAIQDSLISIVILSQNYASSTWCLDELQKILESKESLGREVFPVFYNVDPSDVRQQRGTFAEAFQKHSERFHEHEGKAQRWRNNLKDVANLSGYHSKNKLDPKFIEEIVKGVWTKLQHVLPSYKTNKFVGMESKIKEVNLILKMGLNDVRLLGIWGMGGIGKTSLARVIYETSYYQFDLCYFFADVRDVFEKEGLVPLQKRFLSHNGKLKGIEFDDAYDGMKKIISILCNQKVLIVLDDVSDMSQLEYLAIKQAWLGIGSRVIVTTRNKQLLVAHGEFEIHVAQCLNDEESLQLFCQKAFKSDKPKEDYLELSNNVVKLAAGLPLTLEVLGCHLYGRNIVEWKDALEKIKKFPPNDILKRLRISYEALDPMEKKIFLDIACFFKGMHKSKVMEILEICGFHPIIGIKTLVDKCLLIEYEDDHDPSLGMHDLLQEIGKSIVLEESIKDASKRSRLWSIEDIIHVLTKNKGIGFIEIIQLVSSMKCKTSWGPEAFSIMYNLRILIIRSCDVCLPLGLECFPSSLKILEWEKYPLKSLPLGVHPHELVQIKMHHSKITKLWNEAQDRVV 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1768 636 ProSiteProfiles TIR domain profile. 21 186 IPR000157 GO:0007165
Prci8g1768 636 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 188 - -
Prci8g1768 636 Gene3D - 188 352 IPR027417 -
Prci8g1768 636 Pfam NB-ARC domain 213 436 IPR002182 GO:0043531
Prci8g1768 636 Pfam TIR domain 22 200 IPR000157 GO:0007165
Prci8g1768 636 PRINTS Disease resistance protein signature 297 311 - -
Prci8g1768 636 PRINTS Disease resistance protein signature 390 404 - -
Prci8g1768 636 PRINTS Disease resistance protein signature 221 236 - -
Prci8g1768 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 449 IPR027417 -
Prci8g1768 636 SMART till_3 22 161 IPR000157 GO:0007165
Prci8g1768 636 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 164 IPR035897 -
Prci8g1768 636 SUPERFAMILY L domain-like 553 629 - -
Prci8g1768 636 Gene3D - 20 187 IPR035897 -
Prci8g1768 636 Gene3D - 355 439 IPR042197 -
Prci8g1768 636 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 627 IPR044974 GO:0006952
Prci8g1768 636 SUPERFAMILY "Winged helix" DNA-binding domain 426 534 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1768 Prci-Chr8 14960324 14970072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1768 23 634 WRKY Transcription Factor Family AT4G12020 30.113 1.84e-69 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1768 - - pcin:129315690 892.108