Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1767 ATGGATGCTACTGTTGAAGCTGCCCGTTCTTCCTATTTCTTGAAGTCGTCAATCCTGCCATGGAAGTATCATGTTTTCTTGAGCTTTAGGGGAGAAGACACTCGAAAAGGCTTCACAGCTCATTTACATGATGCTCTTCGACAAAGGGGTATCATAACCTTCATAGATGACGAGCTTCGCAGAGGAGACGTTATTTCCTTTCAACTCGTCCGAGCAATCCAAGATTCTCTCATCTCTATTGTTATTCTTTCGCAGAACTATGCTTCATCAACTTGGTGTTTGGATGAACTCCAAAAGATTCTTGAATCTAAAGAATCTCTAGGTAGAGAAGTTTTTCCGGTGTTCTATAACGTAGATCCATCTGATGTGCGGCAGCAAAGAGGAACATTCGCAGAGGCTTTTCAAAAGCATAGTGAGAGATTTCATGAACATGAAGGGAAGGCACAGAGATGGAGAAATAACTTGAAAGATGTTGCAAATTTATCTGGCTATCACTCTAAGAATAAGCTTGACCCAAAATTCATTGAAGAAATTGTCAAAGGTGTATGGACAAAACTACAACATGTCCTGCCTAGTTACAAAACCAACAAATTTGTTGGAATGGAGTCAAAGATAAAAGAGGTTAATTTGATTTTAAAGATGGGACTCAATGATGTTCGCCTATTAGGAATATGGGGAATGGGCGGTATAGGAAAAACATCTCTTGCAAGAGTTATCTATGAAACAAGCTATTATCAGTTTGATCTTTGTTATTTTTTTGCTGATGTTAGGGATGTTTTTGAAAAGGAAGGATTAGTTCCCCTACAAAAAAGATTTCTTTCACATAATGGGAAGCTGAAAGGAATAGAATTTGATGATGCATATGATGGAATGAAGAAAATAATAAGCATTCTATGCAACCAAAAGGTTTTGATAGTGCTTGATGATGTAAGTGACATGAGCCAACTTGAGTACCTTGCTATAAAGCAAGCTTGGTTAGGTATAGGAAGTAGAGTAATAGTCACTACTAGGAATAAGCAGCTATTGGTAGCTCATGGAGAATTTGAAATTCACGTGGCACAATGTTTAAATGATGAGGAATCTCTTCAACTCTTTTGTCAGAAGGCTTTTAAAAGTGATAAACCAAAAGAAGATTATTTGGAGCTGTCAAATAACGTGGTTAAATTGGCTGCTGGCCTTCCTTTGACACTTGAAGTGTTGGGTTGTCATCTGTATGGAAGAAACATAGTTGAGTGGAAAGATGCTTTGGAGAAAATAAAGAAATTTCCACCAAATGACATTCTAAAGAGACTTCGAATAAGTTATGAAGCATTAGATCCAATGGAAAAAAAAATATTTTTGGATATTGCATGCTTCTTCAAAGGAATGCACAAAAGTAAAGTGATGGAAATATTAGAAATTTGTGGTTTTCACCCTATCATTGGTATCAAAACACTTGTTGACAAATGCTTGTTAATTGAATATGAAGACGATCATGACCCATCTTTAGGCATGCATGATTTGTTACAAGAAATCGGTAAAAGTATTGTTTTGGAAGAATCAATTAAGGATGCTAGTAAACGAAGTAGGTTATGGTCGATAGAGGATATTATTCATGTATTGACAAAAAATAAGGGAATTGGCTTTATTGAGATTATACAGCTTGTATCATCTATGAAATGCAAAACAAGTTGGGGTCCTGAAGCATTCTCAATTATGTATAATCTTAGAATACTCATAATCAGATCGTGTGATGTGTGCCTCCCTTTGGGACTTGAATGCTTTCCTAGTTCATTGAAAATTCTTGAATGGGAGAAATATCCATTAAAATCCCTCCCACTTGGTGTTCATCCGCATGAACTTGTGCAAATCAAAATGCATCATAGTAAAATCACAAAACTTTGGAATGAAGCCCAGCAAGCAAGGAAGAAATTGAAGAGTGCATGCATGACCAAATGCCATGAAGATTTGGCACAAGATATGATTGATGCAGAGCATGAAGATGCCAATTTGCTTGGAGCAATCAGATAA 2010 0.3657 MDATVEAARSSYFLKSSILPWKYHVFLSFRGEDTRKGFTAHLHDALRQRGIITFIDDELRRGDVISFQLVRAIQDSLISIVILSQNYASSTWCLDELQKILESKESLGREVFPVFYNVDPSDVRQQRGTFAEAFQKHSERFHEHEGKAQRWRNNLKDVANLSGYHSKNKLDPKFIEEIVKGVWTKLQHVLPSYKTNKFVGMESKIKEVNLILKMGLNDVRLLGIWGMGGIGKTSLARVIYETSYYQFDLCYFFADVRDVFEKEGLVPLQKRFLSHNGKLKGIEFDDAYDGMKKIISILCNQKVLIVLDDVSDMSQLEYLAIKQAWLGIGSRVIVTTRNKQLLVAHGEFEIHVAQCLNDEESLQLFCQKAFKSDKPKEDYLELSNNVVKLAAGLPLTLEVLGCHLYGRNIVEWKDALEKIKKFPPNDILKRLRISYEALDPMEKKIFLDIACFFKGMHKSKVMEILEICGFHPIIGIKTLVDKCLLIEYEDDHDPSLGMHDLLQEIGKSIVLEESIKDASKRSRLWSIEDIIHVLTKNKGIGFIEIIQLVSSMKCKTSWGPEAFSIMYNLRILIIRSCDVCLPLGLECFPSSLKILEWEKYPLKSLPLGVHPHELVQIKMHHSKITKLWNEAQQARKKLKSACMTKCHEDLAQDMIDAEHEDANLLGAIR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1767 669 ProSiteProfiles TIR domain profile. 21 186 IPR000157 GO:0007165
Prci8g1767 669 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 188 - -
Prci8g1767 669 Pfam NB-ARC domain 213 436 IPR002182 GO:0043531
Prci8g1767 669 SUPERFAMILY L domain-like 553 639 - -
Prci8g1767 669 Pfam TIR domain 22 200 IPR000157 GO:0007165
Prci8g1767 669 Gene3D - 20 187 IPR035897 -
Prci8g1767 669 Gene3D - 188 352 IPR027417 -
Prci8g1767 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 449 IPR027417 -
Prci8g1767 669 Gene3D Ribonuclease Inhibitor 534 661 IPR032675 -
Prci8g1767 669 SUPERFAMILY "Winged helix" DNA-binding domain 426 534 IPR036390 -
Prci8g1767 669 SMART till_3 22 161 IPR000157 GO:0007165
Prci8g1767 669 Gene3D - 355 439 IPR042197 -
Prci8g1767 669 PRINTS Disease resistance protein signature 221 236 - -
Prci8g1767 669 PRINTS Disease resistance protein signature 297 311 - -
Prci8g1767 669 PRINTS Disease resistance protein signature 390 404 - -
Prci8g1767 669 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 164 IPR035897 -
Prci8g1767 669 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 647 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1767 Prci-Chr8 14960324 14970072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1767 23 635 WRKY Transcription Factor Family AT4G12020 30.386 1.78e-69 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1767 - - pcin:129315690 894.034