Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1765 ATGATGCTCTTCGACAAAGGGAACTATGCTTCATCAACTTGGTGTTTGGATGAACTCCAAAAGATTCTTGAATCTAAAGAATCTCTAGGTAGAGAAGTTTTTCCGGTGTTCTATAACGTAGATCCATCTGATGTGCGGCAGCAAAGAGGAACATTCGCAGAGGCTTTTCAAAAGCATAGTGAGAGATTTCATGAACATGAAGGGAAGGCACAGAGATGGAGAAATAACTTGAAAGATGTTGCAAATTTATCTGGCTATCACTCTAAGAATAAGCTTGACCCAAAATTCATTGAAGAAATTGTCAAAGGTGTATGGACAAAACTACAACATGTCCTGCCTAGTTACAAAACCAACAAATTTGTTGGAATGGAGTCAAAGATAAAAGAGGTTAATTTGATTTTAAAGATGGGACTCAATGATGTTCGCCTATTAGGAATATGGGGAATGGGCGGTATAGGAAAAACATCTCTTGCAAGAGTTATCTATGAAACAAGCTATTATCAGTTTGATCTTTGTTATTTTTTTGCTGATGTTAGGGATGTTTTTGAAAAGGAAGGATTAGTTCCCCTACAAAAAAGATTTCTTTCACATAATGGGAAGCTGAAAGGAATAGAATTTGATGATGCATATGATGGAATGAAGAAAATAATAAGCATTCTATGCAACCAAAAGGTTTTGATAGTGCTTGATGATGTAAGTGACATGAGCCAACTTGAGTACCTTGCTATAAAGCAAGCTTGGTTAGGTATAGGAAGTAGAGTAATAGTCACTACTAGGAATAAGCAGCTATTGGTAGCTCATGGAGAATTTGAAATTCACGTGGCACAATGTTTAAATGATGAGGAATCTCTTCAACTCTTTTGTCAGAAGGCTTTTAAAAGTGATAAACCAAAAGAAGATTATTTGGAGCTGTCAAATAACGTGGTTAAATTGGCTGCTGGCCTTCCTTTGACACTTGAAGTGTTGGGTTGTCATCTGTATGGAAGAAACATAGTTGAGTGGAAAGATGCTTTGGAGAAAATAAAGAAATTTCCACCAAATGACATTCTAAAGAGACTTCGAATAAGTTATGAAGCATTAGATCCAATGGAAAAAAAAATATTTTTGGATATTGCATGCTTCTTCAAAGGAATGCACAAAAGTAAAGTGATGGAAATATTAGAAATTTGTGGTTTTCACCCTATCATTGGTATCAAAACACTTGTTGACAAATGCTTGTTAATTGAATATGAAGACGATCATGACCCATCTTTAGGCATGCATGATTTGTTACAAGAAATCGGTAAAAGTATTGTTTTGGAAGAATCAATTAAGGATGCTAGTAAACGAAGTAGGTTATGGTCGATAGAGGATATTATTCATGTATTGACAAAAAATAAGGGAATTGGCTTTATTGAGATTATACAGCTTGTATCATCTATGAAATGCAAAACAAGTTGGGGTCCTGAAGCATTCTCAATTATGTATAATCTTAGAATACTCATAATCAGATCGTGTGATGTGTGCCTCCCTTTGGGACTTGAATGCTTTCCTAGTTCATTGAAAATTCTTGAATGGGAGAAATATCCATTAAAATCCCTCCCACTTGGTGTTCATCCGCATGAACTTGTGCAAATCAAAATGCATCATAGTAAAATCACAAAACTTTGGAATGAAGCCCAGATGTCAGGAAAGTTAAAGATAATTGATTTGAGTTATTCGGAAGATTTAATTCAAACTCCTGATTTTTCATTATTGTCAAATCTAGAGCACCTAGATCTTAAAGGTTGCATAAAACTTGTTGAGGTGCATCCATCACTTGGACAGCATAAGAAAATCACTGAAGTGAATTTGGAAGCTTGTAAAAATCTAAAAGCTCTTCCTTGTAGGCTGGAAATGGACTCTTTAAAAAAATTGGCTCTTTCTGGTTGCTCCAAATTGAAAAAGCTTCCTGAGTTTGGAGAAAATATGAAATGCTTATCAATATTGAAGTTGAAAGATTGCAAAAATCTTCTGTGTCTTTCAAGTATTATTGGTAACCTGAAATCTCTCAAAACTCTTGATATATCTGGTTGCTCAAAATTTTCATCATTACTAGAAAATGTGGATGAAATTGAGAGTATAGAGGAGCTTGATGTGAGTGGTTCTTCTATAAAAGAAATACCATCATCCATTATTAATTTAAAATTCTTGAAGAGATTAAATGCAAATGGATGCAATGGAATTGCACTAGACTCTTCATGGAGCTTACTTTCTCCAATTGCAAGGGTCCTCGGGTTCAATAGTTATAAAGCTCCCATGAGGTTGACACTGCCTCCTTCTATCTCTAGCTTATCCTTATTGACGGAATTAAACTTAAGAAATTGCAATTTAAGTCCTAGATCAATTCCAAATGATCTCGGTTGTTTACCATCTTTGGAGCTTCTTGATCTTAGTGAAAATGATTTCAGCAACCTACCTTTTGGAAGTTGCGTTCTTCCACCTTCATTCTCAAGTTTGTCCTCATTGAGGGAATTGTACTTGAGTCATTGTAATCTATGTGATGGTTCAACTCTTAATGATCTTAGTCGCTTGTCATCCTTAGAACGATTATCTCTATCAGGGAACAATTTTACTAACCTACCATCTACTTTCATCTCTAAGCTCCTGGCTCTACAATATCTTTACATGCTTGATTGCAATAGGCTTTTATCACTGCCAGATGTTCCACCCAATATTAAATATCTTGATATAGGTTGCTGTCATCCCTCAACAATGAGAGTCTTATCATCTCCACATGTGTTATGGAGAATTCTTTATCATCTTATAATAATATAG 2796 0.3512 MMLFDKGNYASSTWCLDELQKILESKESLGREVFPVFYNVDPSDVRQQRGTFAEAFQKHSERFHEHEGKAQRWRNNLKDVANLSGYHSKNKLDPKFIEEIVKGVWTKLQHVLPSYKTNKFVGMESKIKEVNLILKMGLNDVRLLGIWGMGGIGKTSLARVIYETSYYQFDLCYFFADVRDVFEKEGLVPLQKRFLSHNGKLKGIEFDDAYDGMKKIISILCNQKVLIVLDDVSDMSQLEYLAIKQAWLGIGSRVIVTTRNKQLLVAHGEFEIHVAQCLNDEESLQLFCQKAFKSDKPKEDYLELSNNVVKLAAGLPLTLEVLGCHLYGRNIVEWKDALEKIKKFPPNDILKRLRISYEALDPMEKKIFLDIACFFKGMHKSKVMEILEICGFHPIIGIKTLVDKCLLIEYEDDHDPSLGMHDLLQEIGKSIVLEESIKDASKRSRLWSIEDIIHVLTKNKGIGFIEIIQLVSSMKCKTSWGPEAFSIMYNLRILIIRSCDVCLPLGLECFPSSLKILEWEKYPLKSLPLGVHPHELVQIKMHHSKITKLWNEAQMSGKLKIIDLSYSEDLIQTPDFSLLSNLEHLDLKGCIKLVEVHPSLGQHKKITEVNLEACKNLKALPCRLEMDSLKKLALSGCSKLKKLPEFGENMKCLSILKLKDCKNLLCLSSIIGNLKSLKTLDISGCSKFSSLLENVDEIESIEELDVSGSSIKEIPSSIINLKFLKRLNANGCNGIALDSSWSLLSPIARVLGFNSYKAPMRLTLPPSISSLSLLTELNLRNCNLSPRSIPNDLGCLPSLELLDLSENDFSNLPFGSCVLPPSFSSLSSLRELYLSHCNLCDGSTLNDLSRLSSLERLSLSGNNFTNLPSTFISKLLALQYLYMLDCNRLLSLPDVPPNIKYLDIGCCHPSTMRVLSSPHVLWRILYHLIII 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1765 931 Pfam TIR domain 8 122 IPR000157 GO:0007165
Prci8g1765 931 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 645 IPR044974 GO:0006952
Prci8g1765 931 ProSiteProfiles TIR domain profile. 1 108 IPR000157 GO:0007165
Prci8g1765 931 SUPERFAMILY L domain-like 476 735 - -
Prci8g1765 931 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 86 IPR035897 -
Prci8g1765 931 Gene3D - 110 274 IPR027417 -
Prci8g1765 931 Gene3D - 1 109 IPR035897 -
Prci8g1765 931 SUPERFAMILY "Winged helix" DNA-binding domain 348 456 IPR036390 -
Prci8g1765 931 Gene3D - 277 361 IPR042197 -
Prci8g1765 931 SMART LRR_typ_2 771 795 IPR003591 -
Prci8g1765 931 SMART LRR_typ_2 796 819 IPR003591 -
Prci8g1765 931 SMART LRR_typ_2 698 721 IPR003591 -
Prci8g1765 931 SMART LRR_typ_2 851 874 IPR003591 -
Prci8g1765 931 SMART LRR_typ_2 579 603 IPR003591 -
Prci8g1765 931 Gene3D Ribonuclease Inhibitor 471 625 IPR032675 -
Prci8g1765 931 Gene3D Ribonuclease Inhibitor 698 921 IPR032675 -
Prci8g1765 931 Gene3D Ribonuclease Inhibitor 626 697 IPR032675 -
Prci8g1765 931 SUPERFAMILY RNI-like 763 911 - -
Prci8g1765 931 PRINTS Disease resistance protein signature 143 158 - -
Prci8g1765 931 PRINTS Disease resistance protein signature 672 688 - -
Prci8g1765 931 PRINTS Disease resistance protein signature 219 233 - -
Prci8g1765 931 PRINTS Disease resistance protein signature 312 326 - -
Prci8g1765 931 Pfam NB-ARC domain 135 358 IPR002182 GO:0043531
Prci8g1765 931 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 371 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1765 Prci-Chr8 14960323 14970072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1765 11 727 WRKY Transcription Factor Family AT4G12020 31.740 3.24e-91 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1765 - - pcin:129315690 1249.19