Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1760 ATGGATGCTATTGTTGAAGCTGCTTGTTCTTCCTCTTCTTTGAACTCGAAAATCCAGCCATGGAAGCATCATGTTTTCTTGAGCTTTAGAGGAGAAGACACTCGAAAAGGCTTCACAGCCCATTTACACGATGCTTTGCAACGAAGGGGTATCATAACCTTCATAGATGATGAGCTTCAGAGAGGAGATGTTATTTCCCTTCAACTCCTTCGAGCAATCGAGGATTCTCTCATCTCCATTGTCATTCTTTCCCAGAATTATGCTTCCTCGAGTTGGTGTTTGGATGAACTCCAAAAGATTCTTGAGTCAAGAGAATCATTGAAAAGAGACGTCATCCCAGTGTTCTATAATATAGATCCATCTGATGCAAGACATCAAATAGGAGCCTTTGCAGATTCCTTCACAAAACACTTTGAAAGATATTCTAAAGAGAAAGAGAAGGTAGAAGGATGGAGACATGCCTTGAAAGAAGTAGCAAATATATCCGGCTACCACTCTGCGGATCAGCTTGAACCAAAGTTAATTGAAGAAATTGTCACAAGTGTATGGACAAAACTACAGCCTCACATGTCATATTGTTACAAAACTGAACTTGTAGGAATGGAGTCAAGGATTGAAGAAGTGAATGCAATTTTAGAGATTGGATTGAATGATGTTCGCTTTTTAGGAATTTGGGGTATGGGCGGTATCGGCAAGACATCCCTTGCAAGAGCTATCTACGAGATAAATTGTAATCATTTTGATCTTTATTACTTTTTTGCTAATGTTAGGGATGTTTGTCAAAAGGAAGGATGTGTTCCATTGCAAAGAAAATTTGTTTCACGTTGTGGGAAGTTGAGAAGTATAGAATTTGACGATGAATATGAAGGAATGAAGATCATAAGGAGCCTTCTCTTTAATCAAAAAGTTTTAATAGTACTTGATGATGTAAGTGAGATGAACCAGCTTAAATACCTAGGAATGAAGTCAACATGGTTGGGTCCTGGAAGTAGAGTAATAGTAACAACTAGGGATAAACAGTTACTGGCAACACATGGAGAATTTGAAACATATTCTGCAAAATTATTGAACAATGAAGAATCTCTTCAACTCTTTTGTCAAAGGGCTTTTAAAAGTGATAAGCCAACTCAAGATTATCTGGAGTTGTCTAAGAGTGTGGTTCAGCTTGCTGGAGGCCTTCCTTTGACACTTGAAGTGCTAGGCTGTCATCTTTATGGAGCAACTATTGCAGAGTGGAGAGACGCTTTGGAGAAAATAAAGAAATGTCCACCTAGTGACATTATAAATGTGCTTCGAGTGAGTTATGAAGCATTAGATAATATGGAGAAAAAGATTTTCTTAGACATTGCATGCTTCTTCAAAGGAATGTGTAAAGATGAATTGATAAGAATATTGGAAATTTGTGATTTTCATCCAACAATAGGAATCAAAAGACTTGTTGAGAAATCCTTATTAGTGATTGGCAGACGTGATAAAGTGAATATGCATGATATATTACAAGAAATGGGTAAATATATTGTTTTTGAGGAATCACCAGCTAATGTCGGTAGACGCAGCAGACTATGGTCAACAGAAAACATTAATCATGTATTGAAAAACAATGAAGGAACCAATTTAATTGAGGTCATATATCTTGACTCACCCATGCAATATGAGGCAAGTTGGGCTCCTGATGCATTCTCAAAGATGAGTAATCTCAGAATACTTATCATATCATGTGATGTACATCTTCTCCATGGACTCAAATGTCTTCCTAGTTCATTAAAAGTTCTTGAATGGAAGAAGTATCCATTGAAATATATTCCAATTGATGTTCAACTTCATGAACTTGTTTACCTCCAAATGCATCATAGCACACTCATAGAACCTTGGAAAAAAACTCCGATGCTTGAAAAGTTAAAGCTCATTGACTTAAGCTATTCAGAAGATCTAATTCAAACTCCTAATTTTTCAATGCTTTCAAATCTTGAGCATCTAATACTTGAAGGCTGCATAAAACTTGTTGAGGTTCATCCTTCACTGGGATATCATAAGAAAATTGTTGAAGTGAATTTGAGAGATTGCAAAAATCTTAAAGCTATACCTGGAAAAGTGGAAATGGATTCTCTAAGGACATTGATCCTTTCTGGCTGCTCAAGAGTAAAAAGGCTTCCTGAATTTGGGGAAAATATGAAATGCCTATCAATGCTTGAGTTGAAAGATTGTAAAAATGTTATATGCCTTCCGAGTTCTTTAAGAAACCTAAAATCTCTCAAAAACCTCAACATTTCTGGTTGCTCAAAAATGGTTTCACTGCCAAACAATTTGGAAGAAAATAAGGGTATAGAGGAGCTTGATGTGAGTGGAACTGCGATAAGAGAGATACCATCATGTGTTGTTGGTCTAAAACATTTGAGAACACTAAATGCAAATGGGTGTAGAGGTTTTTCACATGATTCATCAAAGAATTTACTTTCCCCAATTGTAAACATGCTTGGGTTCAATAGATATGAGTCTGCTTTAAGCTTGATGTTGCCTCCTTCAATCTCAACTTTATGCTCTTTGAGAGAATTGAATTTAAGTTATTGCAGTTTAAGTGTCGAATCAATTCCAAATGATCTTGGGTGTTTACCATCTTTGAAGCTACTTGATCTTAGTGGAAATGATTTTAGCCACCTACCTTCTGGAAGTTGCATTCTTCCTCTTCTATTCTCAGGTTTATCCTCATTGAAATATTTGGGTCTCAAAGATTGTAATCTCTATGATGGTTCACTCCCTGATGATCTTAGGTCCTTATCATCCTTGGAAGTACTAGATCTTGGAAGAAACAAATTTACTACTCTTCCTTCTGGCTTTGTTTCAAATATTTTAGCTCTAAGATCTCTTACTTTGGATAGTTGCACCAGGCTCTTATCATTGCCAGTTGTTCCGCCCAATGTAGGATATATAAGTGCCATAGGTTGCCATTCTTTAATGGAACCCTCATCATTTCTAGGGTTCCTTTCTTCATCTTACTATTTTTCAAACAGGCCATCAACTGGAATACCTTATCCAATTCGTTATATAAGTCTAGGGAGTGAAATCCCACCATGGTTCCATAATCAAAACATTGATTTCTTGGCCGAGATTGAAGTTTCTTCCACCGAACGTGTTTATCAATCACGTCAATTTGCCATGGACAAAGAGAATATTGGTTCTTTTCAGTTTCACTGCATTGTATCCATAAAAGCAGATCTCTCTCGATTTCGTGGTTCAAGTGAACAGTGGGGAATTTCTCTTTGCTTTGTACTACAAGACATAGTGCCAACAAATGCTAGAAACCTAGACCATCGCCTTGCCATTTATTATGGTTATGAAACTGATCGTGATAATTTAATACGCAAGAAATATGACTGGGGTTTTAGTTGGGAGACTTATTTGGAAGCCTATGATCCTCATCTATGTATTGTGTTTATTCCTTCTGGTTTTCTGCCCAAGGAATACAATCAAGTTGAGTTAATATTTACTACTGCAAGGTTCTGGCCTAGAAGTAGAGGTTTGGTTTTAATAAGAAAGTGTGGGTGGCGTGTGACAAGCAAGGAAGACATTGAGGAGTGGCAGAGATCAAAGAATGCAAGCATGCTCCAGATTCCATGA 3615 0.3698 MDAIVEAACSSSSLNSKIQPWKHHVFLSFRGEDTRKGFTAHLHDALQRRGIITFIDDELQRGDVISLQLLRAIEDSLISIVILSQNYASSSWCLDELQKILESRESLKRDVIPVFYNIDPSDARHQIGAFADSFTKHFERYSKEKEKVEGWRHALKEVANISGYHSADQLEPKLIEEIVTSVWTKLQPHMSYCYKTELVGMESRIEEVNAILEIGLNDVRFLGIWGMGGIGKTSLARAIYEINCNHFDLYYFFANVRDVCQKEGCVPLQRKFVSRCGKLRSIEFDDEYEGMKIIRSLLFNQKVLIVLDDVSEMNQLKYLGMKSTWLGPGSRVIVTTRDKQLLATHGEFETYSAKLLNNEESLQLFCQRAFKSDKPTQDYLELSKSVVQLAGGLPLTLEVLGCHLYGATIAEWRDALEKIKKCPPSDIINVLRVSYEALDNMEKKIFLDIACFFKGMCKDELIRILEICDFHPTIGIKRLVEKSLLVIGRRDKVNMHDILQEMGKYIVFEESPANVGRRSRLWSTENINHVLKNNEGTNLIEVIYLDSPMQYEASWAPDAFSKMSNLRILIISCDVHLLHGLKCLPSSLKVLEWKKYPLKYIPIDVQLHELVYLQMHHSTLIEPWKKTPMLEKLKLIDLSYSEDLIQTPNFSMLSNLEHLILEGCIKLVEVHPSLGYHKKIVEVNLRDCKNLKAIPGKVEMDSLRTLILSGCSRVKRLPEFGENMKCLSMLELKDCKNVICLPSSLRNLKSLKNLNISGCSKMVSLPNNLEENKGIEELDVSGTAIREIPSCVVGLKHLRTLNANGCRGFSHDSSKNLLSPIVNMLGFNRYESALSLMLPPSISTLCSLRELNLSYCSLSVESIPNDLGCLPSLKLLDLSGNDFSHLPSGSCILPLLFSGLSSLKYLGLKDCNLYDGSLPDDLRSLSSLEVLDLGRNKFTTLPSGFVSNILALRSLTLDSCTRLLSLPVVPPNVGYISAIGCHSLMEPSSFLGFLSSSYYFSNRPSTGIPYPIRYISLGSEIPPWFHNQNIDFLAEIEVSSTERVYQSRQFAMDKENIGSFQFHCIVSIKADLSRFRGSSEQWGISLCFVLQDIVPTNARNLDHRLAIYYGYETDRDNLIRKKYDWGFSWETYLEAYDPHLCIVFIPSGFLPKEYNQVELIFTTARFWPRSRGLVLIRKCGWRVTSKEDIEEWQRSKNASMLQIP 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1760 1204 Gene3D Ribonuclease Inhibitor 828 979 IPR032675 -
Prci8g1760 1204 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 719 IPR044974 GO:0006952
Prci8g1760 1204 Gene3D Ribonuclease Inhibitor 519 827 IPR032675 -
Prci8g1760 1204 ProSiteProfiles TIR domain profile. 21 186 IPR000157 GO:0007165
Prci8g1760 1204 SUPERFAMILY L domain-like 496 887 - -
Prci8g1760 1204 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 164 IPR035897 -
Prci8g1760 1204 Gene3D - 193 349 IPR027417 -
Prci8g1760 1204 Pfam NB-ARC domain 207 422 IPR002182 GO:0043531
Prci8g1760 1204 SUPERFAMILY RNI-like 836 986 - -
Prci8g1760 1204 SMART till_3 22 161 IPR000157 GO:0007165
Prci8g1760 1204 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 188 - -
Prci8g1760 1204 SMART LRR_typ_2 653 677 IPR003591 -
Prci8g1760 1204 SMART LRR_typ_2 925 948 IPR003591 -
Prci8g1760 1204 SMART LRR_typ_2 845 869 IPR003591 -
Prci8g1760 1204 SMART LRR_typ_2 870 893 IPR003591 -
Prci8g1760 1204 ProSiteProfiles Leucine-rich repeat profile. 872 893 IPR001611 GO:0005515
Prci8g1760 1204 Gene3D - 355 439 IPR042197 -
Prci8g1760 1204 PRINTS Disease resistance protein signature 297 311 - -
Prci8g1760 1204 PRINTS Disease resistance protein signature 221 236 - -
Prci8g1760 1204 PRINTS Disease resistance protein signature 390 404 - -
Prci8g1760 1204 PRINTS Disease resistance protein signature 746 762 - -
Prci8g1760 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 449 IPR027417 -
Prci8g1760 1204 Pfam TIR domain 22 200 IPR000157 GO:0007165
Prci8g1760 1204 Gene3D - 20 192 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1760 Prci-Chr8 14821871 14827975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1760 30 831 WRKY Transcription Factor Family AT4G12020 31.623 1.86e-102 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1760 - - pcin:129318006 2388.99