Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1703 ATGGAGAAACCAGGAGCTGGTGGAAGGCCAAAGGCAGTTGACATATGGGAACACGTCATGGTGTTGGAAGGGAAAAAAGTGAGGTGTAAACATTGTGGATTTGAATTTGCAGCAAGTGCTAATCGCATCAAATCTCATATTCATCAAATCAAGGGTCAGGGAATTCGTCTGTGTACTGCTTTTCCTCAGCTTTGCGATACTGCTTCCAGAAAAGTCACCAACAATTTGAAAGGGAAAGAAGACCTCATTGATTCACAAGATTTATCAACACTGGATAGGGCAAGAGATTATAACAAACCCAGTGAAACAATGATTGAGTGTCACATGTCCCCCAAAACAATGTGGGAAGGGATAAAGGCTCTCCAACAAACACAAATCCATCAAGAGAGGTTTCAAGTTGGCCCTTTCTCTGTTTCTCATATGGTGAATGAACGTGACTTGCAGTTGATACAATATGTTTTTGAACAATCATGTGATGAGACAATTTTCTCCTCACCACCACGTTTATATTTGAATCAATATGAATTTACCACACTTAGACCGCAGACTTGTTTGGATTCTTTGGTAATAGATGTTTTTGTTGATATCTTGACTGACACTGAAAGGAAGAAAAGTAAACTTCTGAATTGGTATCTTCCGGTGATGTTTTCGCATGTAGCATTCAATAGTGGTGATTTAAGTTTGTTCCTTGACTTTGTTGCACGACATAAAATGGAAGAGAACTACATGCCTGACTCCATATATTTTGAGAAGAATCAAGTTGTTGAAATATGGGATTCTCTTCGCGATCATTTTGTGGATGAAAGTGAACGTCAACAAAGAACAAATAAACTGTTGCTTGCTATGGAGAAACTCTTCGGGGACGTTGCGTTCGCAAAATTTCACCAGAGAATGGCAAGCAATATCTCATTACAGCCTAATGATAATGGATATGATTGTGGTATATTTGTTATTAAATATATGCAACAATCAGATAATTATGTGAGCCAAAATCCTTCATTTCAGTTTGACAGTAATAAAGAAAGATTGGATTTGGCTTTAGAGTTGCTCAAGAGTGACTTAAACCAAGAAAGAGAAATACTATATCATAAAGCAGCAGGAAGCCATTCACAAGTTCTAGGTGAAGAAGATATAGACTCATGTGGAATTAATAGAAAGCAGGTTGACAAATGCAAAACAATATTTGATGTTGGCAAAGGGGCATATATGGAATTGGATGATTCTAATGCTAGAGTCAAGAGAAAAAATGTCAGCTCGAAGACAGGATGTGTTAAAGGTTATGTATTGCCAACAACGGAGTTAGTGGGAGAGAAGTTTCAAAGTTATATCAAGCAACTATGGAAATGGATATCAGAAAAAGAGGTATCAACAATTGGGATATGGGGAATGAGAGGAGCAGGGAAAACAACTTTAGCAACTCATGTGAATAATATGCTTTTAGAAGAAGCCAGTGATACCTTTGACCATGTTATTTGGGTTACTGTATCACAAGATGATAGCATTTATGAGTTGCAAAAGGCCATTGCAAGATCAATTAATTTAGACATATCTGATGAGCATGATGTGAAAAGAATATCTGGGAAATTATTGCAAGCATCCAAACATATAAATAGATATGTGCTTATTTTAGACAATGTTTGGGATCCTATCTTCTTAGAAGAGGAGGTTGGATTTCCTATTTCGAATAATGGGATTAAATTGATCTTGACAACTCGTTCGCGGGAAGTGTGCCAAATAATGAACTGCATGAAGAGCATAATGCAAGTGGAACCATTAAATGAAGAAGATGGTTGGGAATTGTTTAAAGCAACTCTTGGAACCTATATAATACAATTTAGTAAAGTGGAGCCAATAGCAAGGACTGTGGCAAAACAATGTAAGGGTTTGCCCCTTGCAATCGTTAAGATAGCGAGAAGCATGAGGGGAAAAGAACACGAGAGAGAGTGGAGTCGTATGTTGGAATGCCTTCAAAACTTGGACGATGGGCAAAGTGATATGGACAAGTGGGTATTTTCGGTATTGAAATTGAGCTATGCTTGCCCAGATAATAAATTACAAAGATTTTTTTGGCACCCTGCAATAAGTAACAAAGAACATACTTGCGCTTCATGCAAATTGCTCAGACGCCGATGCGCCATAGACTGCATTTTCGCTCCCTATTTCCCTTCCGACGATCCCCAAAGGTTCGCCATCGTTCACATGGTTTTTGGAGCTAGCAACGTCAGGAAAATGTTACAGGAACTTCCGGTGCACCAGAGAACCGAAGCAGTGAGCAGTCTAGTGTATGAAGCTAGTGCGAGAGTGAGAGACCCTGTTTATGGTTGTGTTGGGGCCATATCGTACCTGCAAAACCAGGTCTCGGCGCTTCAAATGCAGCTTGCGGTGGCTCAAGCAGAGATACTCTGCATCCAGATGCAGAATGATCCGATGATGCTGACAAACCCAGAAATTGAGGCCCCCCATCACCCCAAGTCCTTCTTTCTCCAAAATGACCTCCCTCAGTATCTCAATTTAACTTCTTCTTGCAATGTACTTCATCGTGATCACTCTCTCAAGAGAGATAGCATCTTTGGACACGACATGTTTCTTGAATAA 2595 0.3954 MEKPGAGGRPKAVDIWEHVMVLEGKKVRCKHCGFEFAASANRIKSHIHQIKGQGIRLCTAFPQLCDTASRKVTNNLKGKEDLIDSQDLSTLDRARDYNKPSETMIECHMSPKTMWEGIKALQQTQIHQERFQVGPFSVSHMVNERDLQLIQYVFEQSCDETIFSSPPRLYLNQYEFTTLRPQTCLDSLVIDVFVDILTDTERKKSKLLNWYLPVMFSHVAFNSGDLSLFLDFVARHKMEENYMPDSIYFEKNQVVEIWDSLRDHFVDESERQQRTNKLLLAMEKLFGDVAFAKFHQRMASNISLQPNDNGYDCGIFVIKYMQQSDNYVSQNPSFQFDSNKERLDLALELLKSDLNQEREILYHKAAGSHSQVLGEEDIDSCGINRKQVDKCKTIFDVGKGAYMELDDSNARVKRKNVSSKTGCVKGYVLPTTELVGEKFQSYIKQLWKWISEKEVSTIGIWGMRGAGKTTLATHVNNMLLEEASDTFDHVIWVTVSQDDSIYELQKAIARSINLDISDEHDVKRISGKLLQASKHINRYVLILDNVWDPIFLEEEVGFPISNNGIKLILTTRSREVCQIMNCMKSIMQVEPLNEEDGWELFKATLGTYIIQFSKVEPIARTVAKQCKGLPLAIVKIARSMRGKEHEREWSRMLECLQNLDDGQSDMDKWVFSVLKLSYACPDNKLQRFFWHPAISNKEHTCASCKLLRRRCAIDCIFAPYFPSDDPQRFAIVHMVFGASNVRKMLQELPVHQRTEAVSSLVYEASARVRDPVYGCVGAISYLQNQVSALQMQLAVAQAEILCIQMQNDPMMLTNPEIDXAPHHPKSFFLQNDLPQYLNLTSSCNVLHRDHSLKRDSIFGHDMFLE 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1703 865 SUPERFAMILY Cysteine proteinases 142 352 IPR038765 -
Prci8g1703 865 FunFam Probable disease resistance protein At1g61300 427 585 - -
Prci8g1703 865 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 697 813 - -
Prci8g1703 865 Pfam NB-ARC domain 442 678 IPR002182 GO:0043531
Prci8g1703 865 Pfam Lateral organ boundaries (LOB) domain 701 797 IPR004883 -
Prci8g1703 865 Gene3D - 423 589 IPR027417 -
Prci8g1703 865 Coils Coil 779 799 - -
Prci8g1703 865 PRINTS Disease resistance protein signature 457 472 - -
Prci8g1703 865 PRINTS Disease resistance protein signature 533 547 - -
Prci8g1703 865 PRINTS Disease resistance protein signature 626 640 - -
Prci8g1703 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 439 690 IPR027417 -
Prci8g1703 865 Coils Coil 340 360 - -
Prci8g1703 865 Gene3D - 591 680 IPR042197 -
Prci8g1703 865 Gene3D Adenoviral Proteinase; Chain A 246 354 - -
Prci8g1703 865 ProSiteProfiles LOB domain profile. 699 800 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1703 Prci-Chr8 13988429 13994679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1703 701 817 AS2 family AT2G30130 82.051 3.32e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci8g1703 NB-ARC 9e-49 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1703 - - pcin:129318063 1742.24