Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1700 ATGGATAAAACTGAACGTGAACGAACAACACAAAAACTGTTGCTTGCCATGGACAAATTCCTCGGGGTTGCCATGTTCACAAAATTTCTCTGGACGATGGCAATCAATATCCCATTACAGCCTAATGGATATGATTGTGGTATATTTGTTATTAAATATATGCAACAATCAGATAATTTTGTGAGGCAAAATCCCTCATTTCAGTTTGACAGTAATAAAGAAAGATTGGATTTGGCTTTAGAGTTCCTCAACAGTGACTTAAACCAAGAAAAGAAAACACTATATGATAAAGTAGCAAGAAGATGCAAGCAAGGCAAAACTGCAATTGAAAGAAAGTGGGTTGATACATGCAAAACATTATCTGAAGATGTTGGAAGAGGGGCATGTATGGAATTGGTTGCCTCTGATAATAGAGTCAAGAGAAAAAATGCTAGCTTGGAAAAAGGATGTGTTAAAGGTTATGAATTGCCAACAATTGAGTTAGTGGGCAAGAAGTTTCAAAGTTATGCTAAACAAATATGGAAATGGCTAATGGAAAATAAGGTGTCAACAATTGGGATATGGGGAATGGGAGGAGCAGGGAAAACAACTTTAGCAACTCATGTACATAACAAGCTTTTAAAAGAAGCTGGCGATGACTTTGACTATGTTATTTGGGTTACAGCATCACGATATGATACCATTTATGAGTTGCAAAAGGTCATTGCAAGATCAATTAATTTAGACATATCTGATGAGCATGATGTGAAAAGAATATCCGGGAAATTGGTGCAAGCATCTAAGCATTTAAATAGATGTGTCCTTCTTTTAGATGATGTTTGGGATCCTATCTTTTTAGAAGAAGAGGTTGGATTTCCTGTTTCGAATAATGGGATTAAATTGATTTTGACAACTCGTTCATGGGAAGTGTGCCAAACTATGAACTGCTTGAAGAGCGTAATAGAAGTAGAACCATTAAATGAAGAAGATGGTTGGGAATTGTTTAAAACAACTCTTGGATCCCATATGATGCAATCTAGTGAAGTGGAGCCTATAGCAAGTACTGTGGCTAAACAATGTGAGGGTTTGCCCCTTGCAATTGTTACGATAGCAAGAAGCATGAAGGGAAAAGAAGGGAAAAGAGAATGGAGTCATCTGTTGGAATGCCTTCAAAACTTGGATAAGGGGCAAAGTGATATGGAGGAGAGGGTATTTCCTGTGTTGAAATCTAGCTATGCTTGCTTAAATAATAAATTGCAAAGATTTTTTTTGTACCTTGCATTAACTGGCAAGGAATGTTTTGTTGACAGTAATTTTAGATGTTTGATTAGAAGATTTTTCCATGAGGAATGGATAGATGAGAAAAAGAGCTTGGAGATGCAGTATAATGAAGGTTACACCATGATGAAGAAATTAAAGAATGGCAGTTTGCTTATGGAAATATATGATGGGGAATTTTGGATTATGCCCAAATTGCTGAGGGTCATGGCTATTAATATTGTAAAGAAGACTGATGAAATTATGGACAAATCTGATATGAATTTGACAGAAATACCGGAAAATGGTGAATGGCATGAAAATTTGCAAAAAGTTTTTTTGAGCAGAAATGAAATACAGAAAATTGTAGATGGCACATCTCTTAGGTGTTCTAAACTTTCCACATTGCGTTTAGATTGTAATTATGATCTCAAATGGATCCCAGATGATTTTTTCAACAACATGCCTCTCTTAAAGTACTGGATTTGTCTAGGACTGGCATCGAGTGTTTGCCCGAATCCATCTCTAACTTGCAGGATGAGGATTCTGCTGACGTGGGCATTATTATCACACCTCCTCGAGGGCATTTCTGTAATATCTTGCAAGTCGATGGAAGAGATAGTTGGAGAGGATTGTAGCAATGACAATATTCTCCCTACCATCACCCTCCCCAAACTGAGATTTGTGTACTTGTATAAGCTACCAGAATTAAATTCCGTGTTCAGAGGAACCATGCTCTGCCCTTCTCTGAAATCTTTTCATGCCGTCTTTTGTGAGAAACTAAGCCACCCTTCGATAGAAATTGAAGAAGGACATGAGCTTCTGATGAAGAATACCAAGACTGGATACTGTTGGAGCAGTGATGATCAGAACCAATCTGATCAGGAGCTCAAAAATATGGTTGAGAAGGACAGAGAAAAAGAGAACGAGGATGATGAAGAAGAAAAGAAGGAGGAAGAGGAGGAGGAAGAAGAAGAGGATGAGGATGGGGATGAGGAAGAAGAAGAGGATGAGGATGGGGATGGGGAAGAAGAAGAGGATGAGGATGAAGATGGTGAAGAGGACATAAAATTGTGGTTAAAGGCTACTGGCAGTAATTAA 2337 0.3787 MDKTERERTTQKLLLAMDKFLGVAMFTKFLWTMAINIPLQPNGYDCGIFVIKYMQQSDNFVRQNPSFQFDSNKERLDLALEFLNSDLNQEKKTLYDKVARRCKQGKTAIERKWVDTCKTLSEDVGRGACMELVASDNRVKRKNASLEKGCVKGYELPTIELVGKKFQSYAKQIWKWLMENKVSTIGIWGMGGAGKTTLATHVHNKLLKEAGDDFDYVIWVTASRYDTIYELQKVIARSINLDISDEHDVKRISGKLVQASKHLNRCVLLLDDVWDPIFLEEEVGFPVSNNGIKLILTTRSWEVCQTMNCLKSVIEVEPLNEEDGWELFKTTLGSHMMQSSEVEPIASTVAKQCEGLPLAIVTIARSMKGKEGKREWSHLLECLQNLDKGQSDMEERVFPVLKSSYACLNNKLQRFFLYLALTGKECFVDSNFRCLIRRFFHEEWIDEKKSLEMQYNEGYTMMKKLKNGSLLMEIYDGEFWIMPKLLRVMAINIVKKTDEIMDKSDMNLTEIPENGEWHENLQKVFLSRNEIQKIVDGTSLRCSKLSTLRLDCNYDLKWIPDDFFNNMPLLKYWICLGLASSVCPNPSLTCRMRILLTWALLSHLLEGISVISCKSMEEIVGEDCSNDNILPTITLPKLRFVYLYKLPELNSVFRGTMLCPSLKSFHAVFCEKLSHPSIEIEEGHELLMKNTKTGYCWSSDDQNQSDQELKNMVEKDREKENEDDEEEKKEEEEEEEEEDEDGDEEEEEDEDGDGEEEEDEDEDGEEDIKLWLKATGSN 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1700 778 Coils Coil 73 93 - -
Prci8g1700 778 Pfam Ulp1 protease family, C-terminal catalytic domain 26 55 IPR003653 GO:0006508|GO:0008234
Prci8g1700 778 MobiDBLite consensus disorder prediction 719 766 - -
Prci8g1700 778 SMART AAA_5 181 320 IPR003593 GO:0016887
Prci8g1700 778 Gene3D - 2 110 - -
Prci8g1700 778 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 521 675 - -
Prci8g1700 778 Pfam NB-ARC domain 171 405 IPR002182 GO:0043531
Prci8g1700 778 FunFam Probable disease resistance protein At1g61300 152 311 - -
Prci8g1700 778 Gene3D - 319 409 IPR042197 -
Prci8g1700 778 Gene3D Ribonuclease Inhibitor 493 589 IPR032675 -
Prci8g1700 778 SUPERFAMILY Cysteine proteinases 27 84 IPR038765 -
Prci8g1700 778 Coils Coil 712 750 - -
Prci8g1700 778 PRINTS Disease resistance protein signature 353 367 - -
Prci8g1700 778 PRINTS Disease resistance protein signature 260 274 - -
Prci8g1700 778 PRINTS Disease resistance protein signature 184 199 - -
Prci8g1700 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 419 IPR027417 -
Prci8g1700 778 Gene3D - 157 318 IPR027417 -
Prci8g1700 778 FunFam Probable disease resistance protein At5g66910 318 404 - -
Prci8g1700 778 MobiDBLite consensus disorder prediction 712 778 - -
Prci8g1700 778 SUPERFAMILY L domain-like 500 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1700 Prci-Chr8 13961577 13966678 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1700 182 420 WRKY Transcription Factor Family AT5G45050 26.984 5.84e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1700 K13459 - pcin:129318814 1478.77