Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1680 ATGGCAAAACAATCTGCTTTGGATCTCGTCTTCAATGTGAGAAGACAAAAGCCGGAGCTTATATCTCCGGCGAAGCCCACTCCTCATGAAGTCAAGTTTCTATCTAACATTGATTGCCAAGAATTCTTACGAACCCAAATTCCATGCATACATTTCTCTAGTCACAAGTCTTCTATGGCTGGAAAAGACCCCGCCAAAGTCATTAGAGATGCATTGGCTAATGCTCTTGTATTTTACTATCCACTTGCAGGAAGACTCAGGGAAGGTGAAGGTGGCAAAATCGTAGTAGAATGTAATGGAGAAGGAGCGATGTTCATTGAAGCTGACGCTGATATCACTCTTCAACAGTTTGGTGATGATCTTCAACCTCCCTTTCCATGTTTCGAAGATCTACTTTACTCTCCTCCTGGTTCTGACAAAATCCTTTACTGTCCCATCTTGCTTATACAGGTGACACGACTTAAGTGTGGGGGTTTCATCTGTGGGATTCGCGTGAATCACATTATATGTGATGGATATGGTTTTCTCCTATTCATGAAAACCCTCTCTGAGATGGCAAATGGTGCAACTGAGCCTCTGATTCTGCCTGTGTGGCACAGAGAACTCCTAAATGCAAGAGACCCGCCAAACATTACATGCAAACATCATGAGTACGATGAAGTGATCGATGCCACGAACTCTTCAACAAACATAGTTCATCGCTCTTTTTTCTTCGGACCAACTGAGGTTTCTTCCCTTCGTAGATTACTCCCTGACCACCTAAGACAATCGTCCTCCTCATTTGAGGTTATCACGGCATGTCTCTGGCGTTGTAGAGCAAAAGCTTTACAAGTAGATCCACACAAAGAAGTTCGCATCATGGTTGTCGTCAATGGACATTTTAGACGTAATGGATTAAACCCTCCATTATTACCTAAAGGTTATTATGGCAATGCTATTGTGTTTCCAACTGCAATTTCAACTATTGGTAAGCTTTGTGAGAGTCCTTTAGGGTATGCCTTGGAGTTGGTGAGGAAAGCAAAAGCAGAAGTGAATGATGAGTATTTTCACTCTGCGGCTGATCTGATAGCTACTAGAGGACCAACATGTTCTTGGACTATGCTATCATGTATGGTATCGGATTTGAGTAGTCTTAGATTTAGAGATGTTGATTTTGGTTGGGGTAAGGCAGTGTATGCTGGTCCTGCAAAGAGTGGACTTGATACATTTCAAGGACTAATTTTTTATGTTGGACATGCCAATAGTAAAGGAGAGGAAGGTAGGATTGTGCCTGTTTGCTTGCCACCTGAATGCATGGAGAGATTTGCCAAAGAGTTGGATCTTATACTTAATGGTGTTCAATGGCAGATCCAAGAATCAACAAGTGTGAAATCTAAAATCTAA 1383 0.4201 MAKQSALDLVFNVRRQKPELISPAKPTPHEVKFLSNIDCQEFLRTQIPCIHFSSHKSSMAGKDPAKVIRDALANALVFYYPLAGRLREGEGGKIVVECNGEGAMFIEADADITLQQFGDDLQPPFPCFEDLLYSPPGSDKILYCPILLIQVTRLKCGGFICGIRVNHIICDGYGFLLFMKTLSEMANGATEPLILPVWHRELLNARDPPNITCKHHEYDEVIDATNSSTNIVHRSFFFGPTEVSSLRRLLPDHLRQSSSSFEVITACLWRCRAKALQVDPHKEVRIMVVVNGHFRRNGLNPPLLPKGYYGNAIVFPTAISTIGKLCESPLGYALELVRKAKAEVNDEYFHSAADLIATRGPTCSWTMLSCMVSDLSSLRFRDVDFGWGKAVYAGPAKSGLDTFQGLIFYVGHANSKGEEGRIVPVCLPPECMERFAKELDLILNGVQWQIQESTSVKSKI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1680 460 Gene3D - 217 439 IPR023213 -
Prci8g1680 460 Gene3D - 10 216 IPR023213 -
Prci8g1680 460 Pfam Transferase family 13 439 - -
Prci8g1680 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1680 Prci-Chr8 13641016 13643915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1680 12 439 Monolignol Biosynthesis Gene Families AT5G48930 30.180 2.59e-50 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1680 K19861 - cave:132185407 528.865