Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1679 ATGGCAAAGCAATCTGCTTTGGATCTCGTCTTCAATGTGAGGAGACAAAAGCCGGAGCTTATATCTCCGGCAAAGCCCACTCCTCATGAGGTCAAGTTTCTATCTATAATTGATAGCCAAGAATTCTTACGAATCCAAATTCCAGTCATACATTTCTATCATCATAAGCCTTCTATGGCTGGAAAAGACCCCGTCAAAGTCATTAGAGATGCTCTAGCTAATGCTCTTGTATTTTACTATCCATTTGCAGGAAGACTTAGGGAAGGTGAAGGTCACAAACTCATAGTGGAATGTAATGGAGAAGGAGCGATGTTCATTGAAGCTGACGCTGATATCACTCTTCAACAATTTGGTGATGATCTTCAACCTCCCTTTCCATGTTTCGATGAGCTACTTTACTCTCCTCCTGGTTCCGAAAAAATCCTTCACTGTCCCATCTTGCTTATACAGGTGACACGAATTAAGTGTGGAGGTTTCATCTTTGGGGTTCGCATGAATCACAGTATATGCGATGGATCTGGTATTCTCCAATTCATGAATGCTCTCGCCGACATAGCAAATGGTGCAAATGAGCCTTTGGTTCTACCTGTATGGCATAGAGAACATCCAAATGCAAGAGACCCACCAAATGTTACATGCATGCATCATGAGTACGATGAAGTGATCGATACCATGATCTCTTCAACAAGCATAGTTCATCGCTCTTTTTTCTTCGGACCAACTGAGGTCTCTTCCCTTCGTAGATTACTCCCTGACCACATAAGACAATGCTCCTCATCATCGGAGGTTATCACGGCATGTCTCTGGCGTTGTAGAACAAAAGCTTTACAGCTGGACCCACACAAAGAGGTTCGCGTCAAGATTTTCGTCAACGCACGTTTCAGACATAATGGATTAAACCCTCCATTACCAAAAGGTTATTATGGCAATGCTATTGCGTTTCCAGCTGCAATTTCAACTGCTAGTAAGCTTTGCGAGAGTCCCTTAGGGTATGCTTTGGAGTTAGTGAGGAAAGCAATAGCAGAAGTGAATGGTGAGTATATTCACTCCGTGGCTGATCTGATAGGTACTAAAGGACCAACAGGTTCTGGGACTATGCTATCATGTATGGTGTCAGATTTGAGCAGTCTTAGATTTAGAAATGTTGATTTTGGTTGGGGTAAGGCAGCGTATGCCGGTCCTGCAAAGAGTGGATTTGATACATTTCAAGGACAAATTTTTTATGTTGGACATGCCAATAGTAAAGGAGAGGAAGGTAGGTTGGTGCCTGTTTGCTTGCCACCTGAATGCATGGAGAGATTTGCAAAAGAGTTGGATCTCTTGCTTAATGGTGTTCAATGGCAGATCCAAGAATCAACAAGTGTAAGGTCTAAAATCTAA 1380 0.4261 MAKQSALDLVFNVRRQKPELISPAKPTPHEVKFLSIIDSQEFLRIQIPVIHFYHHKPSMAGKDPVKVIRDALANALVFYYPFAGRLREGEGHKLIVECNGEGAMFIEADADITLQQFGDDLQPPFPCFDELLYSPPGSEKILHCPILLIQVTRIKCGGFIFGVRMNHSICDGSGILQFMNALADIANGANEPLVLPVWHREHPNARDPPNVTCMHHEYDEVIDTMISSTSIVHRSFFFGPTEVSSLRRLLPDHIRQCSSSSEVITACLWRCRTKALQLDPHKEVRVKIFVNARFRHNGLNPPLPKGYYGNAIAFPAAISTASKLCESPLGYALELVRKAIAEVNGEYIHSVADLIGTKGPTGSGTMLSCMVSDLSSLRFRNVDFGWGKAAYAGPAKSGFDTFQGQIFYVGHANSKGEEGRLVPVCLPPECMERFAKELDLLLNGVQWQIQESTSVRSKI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1679 459 Gene3D - 221 438 IPR023213 -
Prci8g1679 459 Pfam Transferase family 13 439 - -
Prci8g1679 459 Gene3D - 10 220 IPR023213 -
Prci8g1679 459 PANTHER ACYL TRANSFERASE 4 11 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1679 Prci-Chr8 13620661 13622391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1679 12 438 Monolignol Biosynthesis Gene Families AT5G48930 28.668 5.25e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1679 K19861 - cave:132185407 548.51