Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1608 ATGCAGGCAATCTGTTTAATATTATTCCTGCATGGAGTAATTGTGTTAGGGAATTTAGATATTGATGCGCTGCTTGAACTCAAGAAGAGCATTAAGAATGACCCTTCTGGACTAGTTAATTCTTGGGATTCCAGGTCTTTGGCTTCTGATGGATGCCCTCAGAATTGGTATGGGATATCTTGTGCTGAAGGCAATGTCATCTCCATATCTCTGGATAATGCTGGTTTGGTTGGAGAGTTTAATTTCCTTGCCATTAATGGCCTTAAAATGCTTCGAAACTTGTCAGTTTCGAACAATCAGTTCACAGGGAGCATCTTACATTTTGGTCCAATGGAGTCATTGGAATTTCTTGATCTTTCAGTCAACAAGTTTCATGGGATGGCACCCTCTGACTTGCTTGAGTTACGTAATTTAGTGTATTTAAATCTTTCAACAAATCAATTTGATGGTACAGTTCCCATTGGCTTTGACAAACTCAAGCGGCTGAAGTATTTAGACATGTGCTCTAATAACTTTTCTGGGGATGTTATGCATATCTTTTCTCATATGGGTGCTGTGGTTCATGTTGACCTAAGCTCCAACAGGTTTTCTGGTTCACTGGATTTGGGACTTGGAAACAGCTCTTTTCTCTCCTCAATTCAGTATTTAAATGTTAGTCACAATTCCTTGACTGGTGATCTGTTCGCTCATGATGGGATGCCATACCTTGACAGTTTAGAGATCTTTGATGCTAGTAATAATCAATTAGTGGGTAATATACCTTCCTTCACATTTGTGGTATCTCTGAGGATTCTTCGGCTTGGATGCAACCAGTTATCTGGTTCTCTTCCAGAAGGTCTATTGAAGGAGAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCCTGTTGGAAGCATTACCTCTGTAACTCTGAAGAAGCTTAATTTATCTTCAAACAAACTGTCAGGCCCCTTACCTTTCAAGGTGGGCCACTGTGCCATAATAGATTTAAGTAACAACATGCTATCGGGTAACTTGTCGAGGATTCAGTATTGGGGTAATTATGTTGAGGTGATTCAGCTTAGTTCAAATTCATTGACAGGAATGCTTCCTAACCAAACTACACAATTTTTGAGGTTGACTGAACTTAAGATATCTAATAACTTGTTAGAGGGCAGTCTCCCTTTGGTCTTAGGAACATACCCAGAACTCAAAGAGATTGATATTAGCCACAACCTACTTTCTGGGGTCCTCCTTTCAAGTTTTTTCACCTCGACCAAATTGACCGATCTTAACCTCTCACACAACAACATTTCTGGGCCAATATATTTTCAACAAATTCCAGACAACCCGCAGGTTTATGCTGAAAATTCTAGTCTAGTGTCCGTTGATCTCTCATACAACAACTTGAGCGGGCATCTACCTGCAGAAATAAGTAAGCTTCACAATTTGGCAAGTCTCAACCTATGTAACAACAAATTTGATGGTATTATTCCTGATGATCTTTCTGATCAACTAAGAGAACTCAATGTGTCCTTCAATAATTTTTCTGGCGCTGTGCCTGATAAGTTAATGAAGTTTCCTGAATCAGCATTTCACCCCGGAAATTCCTTGCTGATCTTTCCACATTTGCCTGCTTCACCAGAAGAGGGTGGTGAACTAGGTCTGAAGGAAAAAAGACCACATATAAAATCTGCAACCAAAATTGCCTTGATTGTGAGTTTGGTTTCTGGTGCTTTTGTTATGGTGCTTCTGAGTGTGATAAGTTTTTATAGGGTTCACTGGCAAAACCAAACAGCTACTCATGAAAATAGAACCAAAGATATTTCTCATCATAGTTCTTCTCCATCTGGCAGTGAAGCACCAAAAAGACACGTAGAAGCAATATCTTCAACCCAGAAGGGGTCTGATGATGTTAGAAATGTTCATGCTGCTGTAGAGAAGCCAAAAGATTTGGACTTTTCTGAATTAGTTAAGAACGAGGAAGGAATATCATCTCCAATGTCTTTTCTCTCAATTTCCAATCCTTCATCTTCTAGAAGCCATCCATTTGAGAATCCTAGTGCTCTCAAAATATGCTCACCAGATGAATTGTTTGGGGATTTGAATCTATTTGATGGAGCCTTGGAGCTCACTGCAGAAGAATTTTCTAGTGCTACAGCAGAAATTATTGGTAGGAGCTGTCATGGAACGCTGTATAAAGCTACACTAAACTCAGGTCATGTATTGGTTGTCAAGTCATTAAGGGAAGGAATAGCCAAAAACAAGAAGGATTTTGCAAGGGAAGTTAAAAAACTTGGGACCATCAAGCATCCAAGTCTGGTTTCTCTTCAGGGTTACTATTTGGGTCCAAAGGAGAATGACAAATTCATAATATCAAATTATGTCAGTGCACAATCTTTGGACTTTTATCTTCATGATAGAAGGAATGTTCATCCAATGTCTCTTGATGAAAGGTTCAGGGTGGCCATAGCCGTGGCACAATGTCTGCATTACTTACATAATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATCCTCCTTGAAACTTCTAACCACAATGTGCTGCTCACTGACTATAGCCTGCATCGGATTCTAACCACTGCCGGTACTGCCGAGCAAGTTCAAAATTCAGGCATTCTTGGTTACCGGCCTCCCGAGTTTGCATGCTCAAGCAAACCATGCCCATCCTTGAAGAGTGATGTATATGCATTTGGGGTGATCTTGTTAGAGCTTCTAACAGGAAGAAATTCTGGGGACATTGTTACAGGGATCCCTGGAGTTGTTGTCCTTGCAGACTGGGTTCAGTTTTTGGCGGAGCAAAATCGTGGCAGTGAGTGCTTCGAGAGGCTGCTCTTGTTGGACAGGCACGGTGGTGGGGAATGCCGGCCCCGACTTCTTGATCAAATGCTGAAGGTGGCTCTTAGATGCATCCTTCCAGCATCAGAGAGGCCTGACATGCAGACTGTTTTTGAGGATCTTTCAACATTAAGGTAG 3003 0.4099 MQAICLILFLHGVIVLGNLDIDALLELKKSIKNDPSGLVNSWDSRSLASDGCPQNWYGISCAEGNVISISLDNAGLVGEFNFLAINGLKMLRNLSVSNNQFTGSILHFGPMESLEFLDLSVNKFHGMAPSDLLELRNLVYLNLSTNQFDGTVPIGFDKLKRLKYLDMCSNNFSGDVMHIFSHMGAVVHVDLSSNRFSGSLDLGLGNSSFLSSIQYLNVSHNSLTGDLFAHDGMPYLDSLEIFDASNNQLVGNIPSFTFVVSLRILRLGCNQLSGSLPEGLLKESSMMLSELDLSQNKLEGPVGSITSVTLKKLNLSSNKLSGPLPFKVGHCAIIDLSNNMLSGNLSRIQYWGNYVEVIQLSSNSLTGMLPNQTTQFLRLTELKISNNLLEGSLPLVLGTYPELKEIDISHNLLSGVLLSSFFTSTKLTDLNLSHNNISGPIYFQQIPDNPQVYAENSSLVSVDLSYNNLSGHLPAEISKLHNLASLNLCNNKFDGIIPDDLSDQLRELNVSFNNFSGAVPDKLMKFPESAFHPGNSLLIFPHLPASPEEGGELGLKEKRPHIKSATKIALIVSLVSGAFVMVLLSVISFYRVHWQNQTATHENRTKDISHHSSSPSGSEAPKRHVEAISSTQKGSDDVRNVHAAVEKPKDLDFSELVKNEEGISSPMSFLSISNPSSSRSHPFENPSALKICSPDELFGDLNLFDGALELTAEEFSSATAEIIGRSCHGTLYKATLNSGHVLVVKSLREGIAKNKKDFAREVKKLGTIKHPSLVSLQGYYLGPKENDKFIISNYVSAQSLDFYLHDRRNVHPMSLDERFRVAIAVAQCLHYLHNEKAIPHGNLKSTNILLETSNHNVLLTDYSLHRILTTAGTAEQVQNSGILGYRPPEFACSSKPCPSLKSDVYAFGVILLELLTGRNSGDIVTGIPGVVVLADWVQFLAEQNRGSECFERLLLLDRHGGGECRPRLLDQMLKVALRCILPASERPDMQTVFEDLSTLR 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1608 1000 Gene3D Ribonuclease Inhibitor 19 179 IPR032675 -
Prci8g1608 1000 ProSiteProfiles Protein kinase domain profile. 717 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1608 1000 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 18 227 - -
Prci8g1608 1000 Pfam Leucine rich repeat N-terminal domain 20 61 IPR013210 -
Prci8g1608 1000 Gene3D Ribonuclease Inhibitor 180 352 IPR032675 -
Prci8g1608 1000 SUPERFAMILY L domain-like 22 302 - -
Prci8g1608 1000 SUPERFAMILY Protein kinase-like (PK-like) 720 996 IPR011009 -
Prci8g1608 1000 Gene3D Ribonuclease Inhibitor 449 530 IPR032675 -
Prci8g1608 1000 MobiDBLite consensus disorder prediction 600 640 - -
Prci8g1608 1000 Pfam Protein tyrosine and serine/threonine kinase 721 919 IPR001245 GO:0004672|GO:0006468
Prci8g1608 1000 PANTHER OS07G0626500 PROTEIN 8 96 - -
Prci8g1608 1000 FunFam Leucine-rich repeat receptor-like protein kinase 702 794 - -
Prci8g1608 1000 Pfam Leucine rich repeat 136 196 IPR001611 GO:0005515
Prci8g1608 1000 SUPERFAMILY L domain-like 289 526 - -
Prci8g1608 1000 Gene3D Transferase(Phosphotransferase) domain 1 796 1000 - -
Prci8g1608 1000 Gene3D Phosphorylase Kinase; domain 1 701 794 - -
Prci8g1608 1000 SMART LRR_typ_2 111 134 IPR003591 -
Prci8g1608 1000 SMART LRR_typ_2 259 283 IPR003591 -
Prci8g1608 1000 SMART LRR_typ_2 135 158 IPR003591 -
Prci8g1608 1000 SMART LRR_typ_2 480 504 IPR003591 -
Prci8g1608 1000 SMART LRR_typ_2 210 230 IPR003591 -
Prci8g1608 1000 Pfam Leucine Rich repeat 424 439 IPR001611 GO:0005515
Prci8g1608 1000 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 307 532 - -
Prci8g1608 1000 Gene3D Ribonuclease Inhibitor 353 448 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1608 Prci-Chr8 13070832 13076468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1608 85 999 Receptor kinase-like Gene Family AT5G07280 28.872 1.20e-71 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci8g1608 PK_Tyr_Ser-Thr 2.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1608 - - ccaj:109792420 1350.5