Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1600 ATGGCAGAGGTGGCAGTATCTGTGGCAGCAAAACTCGCTGAGTATTTGGTGGATCCAACTTTACAGCAGCTGCAATATTTGTTCTGTGTCGGCAAAATCACAAGAAATGTTGAGGTCAGAAAGTGGGAGCTCATACTCACACAAGGGAAGGTGCAAGAACGTGTTCAAGAGGCCATCAACAAGACTGAGAGGATTGATGGTGAGGTTAACAAGTGGAAGAGTGACGTGAAGAACCTCATAGCAGAGCTGGATAAGTTGGAGGAAAAACTAAAGGCCAACAATGGCTGCTGCTTTAGAAGGTGGTGTCCTACTTGGAGGAGATATTGTCTTTGCAAAGAGTTGGCCAAGATAACCCAAAGGATGGTAGAGCTAAATATGGAAAGTGATAATTTTAATCCATTTTCTCATCCTACTATTATCCCAGGTATAGAGTATCACTCTTCTCCCAATTTTACGTTCTTCAACTCTACGCAAAGGGCTTTCGATGATCTGCTGAAGGCATTAAAAGATGATGGCAATTCCATAATTGGGCTATGGGGCATGGGCGGTTCAGGGAAAACTACCTTGGTGACAGAAGTAGGGAAGGAAGCCAAAGAATCAAAGCTATTTGATCGAGTTGTGAAGACTACAATTTCTCAAAACCTGGAAATCAGAAAAGTTCAAGGTGAAATTGCTGATATGTTGGGACTTAAATTGGAGGAAGAATCTGATATTGGAAGGGCAAAAAGATTAGCACTAAGATTACAGAGGGGAGAACGGATCTTGATAATATTGGATGATGTATGGGCTAAGCTGAATCTTGAGGACATAGGGATTCCCTTTGGGGGAAATGATCAAAGAAATTGCAAAATTGTCCTAACCACACGCCGGCAAGATGTATGTACATTGATGAATTGTGGAAATAATGTAATTCAGTTAGGCATGTTAGAAGAAGATGAAGCTTGGGAACTTTTTCAAACTCATGCTAATGTTGATGGTGGTGCTAAAGAAGTCGTGGCACGGGAAGTTGCTAAGGAATGTAAAGGACTTCCCATTGCAATTGTAGCTGTTGGAACTTGCCTGAAAGCAAAAGGACTTGATGAGATGGAGGTGGTACTGCACAAGTTGAAGCATTCAAAACCAATAGACCATGAGGATAAAAGTGTGAGAGATGCTTTTGCTTGTCTCGAACTAAGTTACAGTTATTTGAAATCCAAAGAAGCCAAGTCATTATTCTTGATGTGTGCAATGTTTCCTGAAGATCATAAAATTGTCATTGAAGACCTTTTTAGATATGGAATAGGGTTAGGCCTATGTGAAGATGCTGAATCGTTTGCAATAGTAAGGAGCCAAGTTACAACAGCTATAGGTGTTCTCATTGACTCTTCATTGTTGATGTATTCTCTCAATCTCAAGGGTGAAAAATGTGTGAAAATGCATGACATGGTTCGTGATGTAGCATTATGGATATCATCTAATATGAAGGGTACTATTAAAGTAAACTATGCAAAAGAACTGAATGGATTTCTTGATGATGATGTGGTAAAAGATTGCTATGCAGTAAGCTCATGGTATCATCAATGGAAATCACTTGAATTTCCTTCTCAATTGAATGCTCCAAAACTTGATATTCTATTGTTACATTCAACCTCATCCTTGGATTTATCACATGCATCATTTGAAGGTGCAAAAGGACTCAAGGTTGTGGCTATTATTAGCAAAGGATATAGTCATTTTAGTCGTCTTCCCTCATTGATGGTAAAGCCTCAATCAATCCAACAACTGTCTAATCTTCGGACTTTGAGGTTGCGAGGTTGGTATTTAGGTGACATCTCTTTTGTGGTAAGCCTTACAAGACTTGAAATTCTTGACTTGCAAGGTAGTAAATTTGAAAAACTTCCAAATGGAATTGAATAA 1896 0.3935 MAEVAVSVAAKLAEYLVDPTLQQLQYLFCVGKITRNVEVRKWELILTQGKVQERVQEAINKTERIDGEVNKWKSDVKNLIAELDKLEEKLKANNGCCFRRWCPTWRRYCLCKELAKITQRMVELNMESDNFNPFSHPTIIPGIEYHSSPNFTFFNSTQRAFDDLLKALKDDGNSIIGLWGMGGSGKTTLVTEVGKEAKESKLFDRVVKTTISQNLEIRKVQGEIADMLGLKLEEESDIGRAKRLALRLQRGERILIILDDVWAKLNLEDIGIPFGGNDQRNCKIVLTTRRQDVCTLMNCGNNVIQLGMLEEDEAWELFQTHANVDGGAKEVVAREVAKECKGLPIAIVAVGTCLKAKGLDEMEVVLHKLKHSKPIDHEDKSVRDAFACLELSYSYLKSKEAKSLFLMCAMFPEDHKIVIEDLFRYGIGLGLCEDAESFAIVRSQVTTAIGVLIDSSLLMYSLNLKGEKCVKMHDMVRDVALWISSNMKGTIKVNYAKELNGFLDDDVVKDCYAVSSWYHQWKSLEFPSQLNAPKLDILLLHSTSSLDLSHASFEGAKGLKVVAIISKGYSHFSRLPSLMVKPQSIQQLSNLRTLRLRGWYLGDISFVVSLTRLEILDLQGSKFEKLPNGIE 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1600 631 Gene3D - 308 392 IPR042197 -
Prci8g1600 631 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 36 621 - -
Prci8g1600 631 Gene3D - 146 306 IPR027417 -
Prci8g1600 631 PRINTS Disease resistance protein signature 608 624 - -
Prci8g1600 631 PRINTS Disease resistance protein signature 340 354 - -
Prci8g1600 631 PRINTS Disease resistance protein signature 248 262 - -
Prci8g1600 631 PRINTS Disease resistance protein signature 175 190 - -
Prci8g1600 631 SUPERFAMILY L domain-like 471 628 - -
Prci8g1600 631 FunFam Probable disease resistance protein At1g61300 152 302 - -
Prci8g1600 631 Pfam NB-ARC domain 162 393 IPR002182 GO:0043531
Prci8g1600 631 Coils Coil 69 96 - -
Prci8g1600 631 Gene3D Ribonuclease Inhibitor 497 631 IPR032675 -
Prci8g1600 631 Gene3D - 393 481 IPR036388 -
Prci8g1600 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 408 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1600 Prci-Chr8 12968421 12970857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1600 176 627 WRKY Transcription Factor Family AT5G45050 24.902 7.04e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1600 - - pcin:129317821 1032.71