Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1590 ATGGATTCGTTTGAGCCAAATGGGAACGGTGACAGTATGCCACCACCACCTCCGCCTCCGGAGGTGCCGCCAAATGTTGTTCCAGTGAAAGCAGAAGAGCTCCCACCTGAACCGGGTAAGAAGAAGCCTTCTCGAGTTCCAATAGCTAGACGTGGTTTGGGATCCAAAGGAAGTAGTCTGAAGCTTCTCACCAATCACTTTAAAGTCAGTGTTAATAACAACGATGGACATTTCTACCATTACAGTGTAGCGCTTTTTTATGAAGATGGCCGTCCTGTGGAAGGGAAGGGCGTGGGAAGAAAAGTAATTGATAGGGTGCAGGAGACTTATGATTCTGAGTTAGCTGGAAAAGACTTTGCCTATGATGGTGAGAAGAGTTTGTTCACTGTTGGAGCTCTTCCTCGAAACAAACTTGAGTTTACGGTTGTTCTTGAGGATATCACTTCAAACAGAAATAATGGGAATTGTAGCCCTGATGGTCATGGAAGTCCAAATGAGGGTGATAGGAAAAGGACGCGGCGCCCATATCGTGCCAAAACATTTAAAGTGGAGATTAGCTTTGCTGCGAAAATTCCAATGCAGGCAATTGCCAATGCATTACGTGGGCAGGAGACTGAGAATTTTCAGGAAGCCATAAGAGTTCTTGATATTATATTGAGGCAAAATGCTGCTAAGAAAGGCTGTCTGCTTGTTCGGCAGTCCTTCTTCCACAATGATCCAATGAATTTTGCAGACGTAGGCGGTGGTGTTCTCGGCTGTAGAGGATTTCATTCAAGTTTCAGGACCACACAGAGTGGGTTGTCCCTCAATATTGATGTATCAACTACAATGATAATACGACCTGGGCCTGTGGTGGACTTCTTAATTGCCAACCAAAATGTGAGAGATCCTTTTTCCCTTGATTGGGCCAAGGCTAAGAAGACTCTGAAGAATTTGAGAATTACAACTAGCCCATCGAATCAAGAGTACAAGATATGTGGGCTCAGTGAACTCCCATGCCGTCAGCAGACGTTTACTCTCAAGAGTAAAGGTGGTGATGAAGGTGCAGAGGAAATAACTGTTTATGATTATTTTGTAAATTATCGTAAGATGGATCTTCGGTACTCTGCTGATCTGCCATGCATTAATGTTGGGAAGCCAAAACGCCCTACTTATTTCCCCATTGAGCTTTGCTCTTTGGTATCCCTGCAACGTTATACAAAGGCACTGACTACACTACAAAGGGCGTCATTGGTTGAGAAGTCTCGTCAGAAGCCACAAGAAAGGATGAAGGTTTTGTCTGATGTTTTAAAAGTCAGCAAGTATGATTCTGATCCTATGCTTCAGAATTGTTCTGTTCGGATAAGTACTGGTTTTACAGAAGTGGAGGGCCGTGTTCTGCCAGCTCCAAGGTTGAAGTTTGGCAATGGAGAGGAATTCAATCCAAGAAATGGAAGATGGAATTTTAACAATAAGAAATTTGTTCAGCCAGCTAGGATAGAGCGATGGGCTGTGGCAAACTTTTCTGCACGTTGTGATGTGCGTGCTCTTGTTCGAGATCTGACTAGATGTGCTGGAATGAAAGGAATTCACATAGATGAGCCATTTGATGTATTCGAGGAAAGTCAGCAGTTTAGGCGTGCCCCACCTATGGTCAGAGTGGAACAGATGTTTGAACAAATCCAGTCGAAACTTCCTGGAGCTCCCCAGTTCCTTCTGTGTCTTCTTCCAGAGCGCAAAAATTGTGATATATATGGTCCCTGGAAAAAGAAGAATCTTGCTGACTTTGGAATTATTAATCAGTGCATGTGTCCACAAAGGATCAATGATCAATATCTTACAAATGTTTTGTTGAAAATCAATGCTAAGCTAGGTGGGATGAATTCATTTTTATCTGTTGAAAAAACTCCTTATCTTCCTGTCGTTTCCAAAGCTCCAACAATTATCCTTGGGATGGACGTGTCCCATGGTTCACCTGGGCAGACAGATATTCCTTCAATTGCAGCGGTGGTGAGCTCCAGACAGTGGCCTTTGATCTCAAAGTACAGGGCATGTGTTCGAACTCAATCTCCAAAGGTTGAAATGATTGATAATCTGTTCAAGCCAGTAGGTGAAAAGGAAGATGAGGGCATTATCAGGGAACTTTTGGTTGATTTCTATACAAGTTCTGGGAACAGGAAGCCTGAAAATATTATCATATTCAGGGATGGGGTTAGTGAATCACAGTTCACTCAAGTTTTAAACATCGAGCTTAATCAAATCATGGAGGCTTGTAAATTCCTTGATGAGCAGTGGAACCCCAAATTTGTGGTGATTGTTGCTCAGAAGAACCACCACACCAAATTTTTCCAGAGTGGGTCTCCTGATAATGTCCCCCCTGGAACTATTATTGACAACAAAATTTGTCATCCCCGAAATTATGATTTCTACTTGTGTGCACATGCTGGAATGATTGTTTTACTTGTGATTCTTCCTGCCTGGTATTATTCTACTTTAATCTCTTTGAAGGCACAGGAGAATCTTGCAAGAAGATTTTCTTATTAG 2523 0.4269 MDSFEPNGNGDSMPPPPPPPEVPPNVVPVKAEELPPEPGKKKPSRVPIARRGLGSKGSSLKLLTNHFKVSVNNNDGHFYHYSVALFYEDGRPVEGKGVGRKVIDRVQETYDSELAGKDFAYDGEKSLFTVGALPRNKLEFTVVLEDITSNRNNGNCSPDGHGSPNEGDRKRTRRPYRAKTFKVEISFAAKIPMQAIANALRGQETENFQEAIRVLDIILRQNAAKKGCLLVRQSFFHNDPMNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIRPGPVVDFLIANQNVRDPFSLDWAKAKKTLKNLRITTSPSNQEYKICGLSELPCRQQTFTLKSKGGDEGAEEITVYDYFVNYRKMDLRYSADLPCINVGKPKRPTYFPIELCSLVSLQRYTKALTTLQRASLVEKSRQKPQERMKVLSDVLKVSKYDSDPMLQNCSVRISTGFTEVEGRVLPAPRLKFGNGEEFNPRNGRWNFNNKKFVQPARIERWAVANFSARCDVRALVRDLTRCAGMKGIHIDEPFDVFEESQQFRRAPPMVRVEQMFEQIQSKLPGAPQFLLCLLPERKNCDIYGPWKKKNLADFGIINQCMCPQRINDQYLTNVLLKINAKLGGMNSFLSVEKTPYLPVVSKAPTIILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVGEKEDEGIIRELLVDFYTSSGNRKPENIIIFRDGVSESQFTQVLNIELNQIMEACKFLDEQWNPKFVVIVAQKNHHTKFFQSGSPDNVPPGTIIDNKICHPRNYDFYLCAHAGMIVLLVILPAWYYSTLISLKAQENLARRFSY 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1590 840 Pfam PAZ domain 285 411 IPR003100 GO:0005515
Prci8g1590 840 Gene3D - 459 625 - -
Prci8g1590 840 MobiDBLite consensus disorder prediction 151 175 - -
Prci8g1590 840 CDD PAZ_argonaute_like 281 394 - -
Prci8g1590 840 Pfam Piwi domain 565 811 IPR003165 GO:0003676
Prci8g1590 840 ProSiteProfiles PAZ domain profile. 306 395 IPR003100 GO:0005515
Prci8g1590 840 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 40 809 - -
Prci8g1590 840 MobiDBLite consensus disorder prediction 10 31 - -
Prci8g1590 840 SMART DUF1785_2 229 281 IPR014811 -
Prci8g1590 840 Pfam Argonaute linker 2 domain 421 467 IPR032472 -
Prci8g1590 840 SUPERFAMILY PAZ domain 276 435 IPR036085 GO:0005515
Prci8g1590 840 SMART Piwi_a_2 564 835 IPR003165 GO:0003676
Prci8g1590 840 Pfam Mid domain of argonaute 474 526 IPR032473 -
Prci8g1590 840 FunFam Protein argonaute 7 276 399 - -
Prci8g1590 840 Pfam N-terminal domain of argonaute 60 219 IPR032474 -
Prci8g1590 840 ProSiteProfiles Piwi domain profile. 564 840 IPR003165 GO:0003676
Prci8g1590 840 Gene3D paz domain 275 399 - -
Prci8g1590 840 MobiDBLite consensus disorder prediction 1 55 - -
Prci8g1590 840 Pfam Argonaute linker 1 domain 231 279 IPR014811 -
Prci8g1590 840 SUPERFAMILY Ribonuclease H-like 548 811 IPR012337 -
Prci8g1590 840 Gene3D - 632 822 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1590 Prci-Chr8 12830452 12837929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1590 50 810 Eukaryotic Initiation Factors Gene Family AT5G43810 35.139 3.41e-136 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1590 K11593 - gmx:100820376 1364.36