Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1588 ATGGATTCGTTTGAGCCAAATGGGAACGGTGACAGTATGCCACCACCACCTCCGCCTCCGGAGGTGCCGCCAAATGTTGTTCCAGTGAAAGCAGAAGAGCTCCCACCTGAACCGGGTAAGAAGAAGCCTTCTCGAGTTCCAATAGCTAGACGTGGTTTGGGATCCAAAGGAAGTAGTCTGAAGCTTCTCACCAATCACTTTAAAGTCAGTGTTAATAACAACGATGGACATTTCTACCATTACAGTGTAGCGCTTTTTTATGAAGATGGCCGTCCTGTGGAAGGGAAGGGCGTGGGAAGAAAAGTAATTGATAGGGTGCAGGAGACTTATGATTCTGAGTTAGCTGGAAAAGACTTTGCCTATGATGGTGAGAAGAGTTTGTTCACTGTTGGAGCTCTTCCTCGAAACAAACTTGAGTTTACGGTTGTTCTTGAGGATATCACTTCAAACAGAAATAATGGGAATTGTAGCCCTGATGGTCATGGAAGTCCAAATGAGGGTGATAGGAAAAGGACGCGGCGCCCATATCGTGCCAAAACATTTAAAGTGGAGATTAGCTTTGCTGCGAAAATTCCAATGCAGGCAATTGCCAATGCATTACGTGGGCAGGAGACTGAGAATTTTCAGGAAGCCATAAGAGTTCTTGATATTATATTGAGGCAAAATGCTGCTAAGAAAGGCTGTCTGCTTGTTCGGCAGTCCTTCTTCCACAATGATCCAATGAATTTTGCAGACGTAGGCGGTGGTGTTCTCGGCTGTAGAGGATTTCATTCAAGTTTCAGGACCACACAGAGTGGGTTGTCCCTCAATATTGATGTATCAACTACAATGATAATACGACCTGGGCCTGTGGTGGACTTCTTAATTGCCAACCAAAATGTGAGAGATCCTTTTTCCCTTGATTGGGCCAAGGCTAAGAAGACTCTGAAGAATTTGAGAATTACAACTAGCCCATCGAATCAAGAGTACAAGATATGTGGGCTCAGTGAACTCCCATGCCGTCAGCAGACGTTTACTCTCAAGAGTAAAGGTGGTGATGAAGGTGCAGAGGAAATAACTGTTTATGATTATTTTGTAAATTATCGTAAGATGGATCTTCGGTACTCTGCTGATCTGCCATGCATTAATGTTGGGAAGCCAAAACGCCCTACTTATTTCCCCATTGAGCTTTGCTCTTTGGTATCCCTGCAACGTTATACAAAGGCACTGACTACACTACAAAGGGCGTCATTGGTTGAGAAGTCTCGTCAGAAGCCACAAGAAAGGATGAAGGTTTTGTCTGATGTTTTAAAAGTCAGCAAGTATGATTCTGATCCTATGCTTCAGAATTGTTCTGTTCGGATAAGTACTGGTTTTACAGAAGTGGAGGGCCGTGTTCTGCCAGCTCCAAGGTTGAAGTTTGGCAATGGAGAGGAATTCAATCCAAGAAATGGAAGATGGAATTTTAACAATAAGAAATTTGTTCAGCCAGCTAGGATAGAGCGATGGGCTGTGGCAAACTTTTCTGCACGTTGTGATGTGCGTGCTCTTGTTCGAGATCTGACTAGATGTGCTGGAATGAAAGGAATTCACATAGATGAGCCATTTGATGTATTCGAGGAAAGTCAGCAGTTTAGGCGTGCCCCACCTATGGTCAGAGTGGAACAGATGTTTGAACAAATCCAGTCGAAACTTCCTGGAGCTCCCCAGTTCCTTCTGTGTCTTCTTCCAGAGCGCAAAAATTGTGATATATATGGTCCCTGGAAAAAGAAGAATCTTGCTGACTTTGGAATTATTAATCAGTGCATGTGTCCACAAAGGATCAATGATCAATATCTTACAAATGTTTTGTTGAAAATCAATGCTAAGCTAGGTGGGATGAATTCATTTTTATCTGTTGAAAAAACTCCTTATCTTCCTGTCGTTTCCAAAGCTCCAACAATTATCCTTGGGATGGACGTGTCCCATGGTTCACCTGGGCAGACAGATATTCCTTCAATTGCAGCGGTGGTGAGCTCCAGACAGTGGCCTTTGATCTCAAAGTACAGGGCATGTGTTCGAACTCAATCTCCAAAGGTTGAAATGATTGATAATCTGTTCAAGCCAGTAGGTGAAAAGGAAGATGAGGGCATTATCAGGGAACTTTTGGTTGATTTCTATACAAGTTCTGGGAACAGGAAGCCTGAAAATATTATCATATTCAGGGATGGGGTTAGTGAATCACAGTTCACTCAAGTTTTAAACATCGAGCTTAATCAAATCATGGAGGCTTGTAAATTCCTTGATGAGCAGTGGAACCCCAAATTTGTGGTGATTGTTGCTCAGAAGAACCACCACACCAAATTTTTCCAGAGTGGGTCTCCTGATAATGTCCCCCCTGGAACTATTATTGACAACAAAATTTGTCATCCCCGAAATTATGATTTCTACTTGTGTGCACATGCTGGAATGATTGGAACCACTAGGCCGACACATTACCATGTTCTGTTAGATGAGGCTGGTTTCTCGGCTGATGATCTCCAGGAGCTAGTGCATTCTCTTTCATATGTGTATCAGCGGAGCACCACTGCCATATCTGTTGTTGCTCCAGTCTGTTATGCACACCTGGCGGCAACTCAGCTGGGACAATTCATGAAATTTGAGGACAAGTCTGAGACTTCAAGCCATGGCGGGCACTCTTCTGCCTCTGCTGGTTCTGTTCCTCAGTTACCGCCACTGCAGGAAAATGTCTGCAACTCCATGTTCTTTTGTTGA 2733 0.4369 MDSFEPNGNGDSMPPPPPPPEVPPNVVPVKAEELPPEPGKKKPSRVPIARRGLGSKGSSLKLLTNHFKVSVNNNDGHFYHYSVALFYEDGRPVEGKGVGRKVIDRVQETYDSELAGKDFAYDGEKSLFTVGALPRNKLEFTVVLEDITSNRNNGNCSPDGHGSPNEGDRKRTRRPYRAKTFKVEISFAAKIPMQAIANALRGQETENFQEAIRVLDIILRQNAAKKGCLLVRQSFFHNDPMNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIRPGPVVDFLIANQNVRDPFSLDWAKAKKTLKNLRITTSPSNQEYKICGLSELPCRQQTFTLKSKGGDEGAEEITVYDYFVNYRKMDLRYSADLPCINVGKPKRPTYFPIELCSLVSLQRYTKALTTLQRASLVEKSRQKPQERMKVLSDVLKVSKYDSDPMLQNCSVRISTGFTEVEGRVLPAPRLKFGNGEEFNPRNGRWNFNNKKFVQPARIERWAVANFSARCDVRALVRDLTRCAGMKGIHIDEPFDVFEESQQFRRAPPMVRVEQMFEQIQSKLPGAPQFLLCLLPERKNCDIYGPWKKKNLADFGIINQCMCPQRINDQYLTNVLLKINAKLGGMNSFLSVEKTPYLPVVSKAPTIILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVGEKEDEGIIRELLVDFYTSSGNRKPENIIIFRDGVSESQFTQVLNIELNQIMEACKFLDEQWNPKFVVIVAQKNHHTKFFQSGSPDNVPPGTIIDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEAGFSADDLQELVHSLSYVYQRSTTAISVVAPVCYAHLAATQLGQFMKFEDKSETSSHGGHSSASAGSVPQLPPLQENVCNSMFFC 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1588 910 ProSiteProfiles Piwi domain profile. 564 872 IPR003165 GO:0003676
Prci8g1588 910 Gene3D - 631 910 IPR036397 GO:0003676
Prci8g1588 910 FunFam Protein argonaute 7 276 399 - -
Prci8g1588 910 Pfam N-terminal domain of argonaute 60 219 IPR032474 -
Prci8g1588 910 Pfam Argonaute linker 1 domain 231 279 IPR014811 -
Prci8g1588 910 MobiDBLite consensus disorder prediction 151 175 - -
Prci8g1588 910 Pfam Mid domain of argonaute 474 526 IPR032473 -
Prci8g1588 910 Gene3D - 459 625 - -
Prci8g1588 910 Pfam PAZ domain 285 411 IPR003100 GO:0005515
Prci8g1588 910 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 40 874 - -
Prci8g1588 910 CDD PAZ_argonaute_like 281 394 - -
Prci8g1588 910 SUPERFAMILY PAZ domain 276 435 IPR036085 GO:0005515
Prci8g1588 910 ProSiteProfiles PAZ domain profile. 306 395 IPR003100 GO:0005515
Prci8g1588 910 MobiDBLite consensus disorder prediction 10 31 - -
Prci8g1588 910 SMART DUF1785_2 229 281 IPR014811 -
Prci8g1588 910 Gene3D paz domain 275 399 - -
Prci8g1588 910 SMART Piwi_a_2 564 872 IPR003165 GO:0003676
Prci8g1588 910 Pfam Piwi domain 565 872 IPR003165 GO:0003676
Prci8g1588 910 MobiDBLite consensus disorder prediction 1 55 - -
Prci8g1588 910 Pfam Argonaute linker 2 domain 421 467 IPR032472 -
Prci8g1588 910 SUPERFAMILY Ribonuclease H-like 548 870 IPR012337 -
Prci8g1588 910 FunFam Protein argonaute 3 632 910 - -
Prci8g1588 910 CDD Piwi_ago-like 439 866 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1588 Prci-Chr8 12829277 12837932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1588 50 910 Eukaryotic Initiation Factors Gene Family AT5G43810 35.857 1.87e-165 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1588 K11593 - gmx:100820376 1518.44