Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1582 ATGGAAGAAGCTCAGTTACCAATCAACAGTGAAGGAAACCCTATTCGATGCAAAGCCGCCGTCTGTCGGAATCCCGGCGAGCCGTTAGTGATTGAGGAGATCTTTGTAGCGCCGCCGATGTCTCGTGAAGTTCGGGTTCGGATCATCTGCACCTCTCTCTGTCACAGCGACCTCACGTTCTGGAAGATGAAGGATCCTCCTGGAGTGTTTCCAAGGATTCTGGGCCACGAGGCTGTGGGGGTTGTGGAAAGTGTAGGAGGAGGAGTGAGTGAAGTGGAGAAAGGAGATGTGGTGGTTCCAGTGTTCATGCCACAATGTGAAGAGTGTGCGGATTGCAAGTCTAAGAGGAGCAACCTATGTTCAAAGGTGCCATTCAGGATGAGTGCTTGGATGCCAAGGCATGAGAGCAGCAGATTCACGGACCTGAATGGCCAAACTATTTACCATTTCTTGTTTGTGTCCAGTTTCAGCCAATACACAGTGGTTGATGTTGCCAATTTGACTAAGATTGATCATCCCTCCTCTGTTGTTCCTCCCGACAGGGCTTGCCTCCTCAGTTGTGGTGTCTCCACTGGAGTAGGTGCTGCTTGGAAGACAGCAGAAGTGGAGGAAGGTTCCACGGTTGCCATATTTGGGCTTGGTTCCATTGGATTGGCCGTTGCAGAGGGAGCTAGACTATGTGGAGCTGCTAGGATTATTGGAGTGGACTTGAACCCACAAAAATTTGAAATTGGAAAAAAGTTTGGAGTCACAGACTTCGTTAATTCTGGAGAATGTGGGGAGAAACCAGTTAGCCAGGTGATTAAAGAGATGACAGATGGAGGGGCTGATTATTGCTTTGAGTGCGTTGGGATGGCATCGTTGGTCCATGAAGCTTATGCTTCTTGTCGAAAGGGTTGGGGGAAAACAATAGTGGTTGGAGTGGATAAGTTAGGATCTCGTTTGAGCTTTAGCTCTGCTGAAGTTCTTGGAAGTGGAAAATGCCTTATGGGATGTTTATTTGGAGGACTCAAACCCAAGTCTCATATTCCCATTCTCCTCCAACGTTATATCAATAAGGAACTACAACTGGATGATTTTGTCACACATGAAATGGAATTGGAGGACATAAATAAGGCTTTTGATCTACTCCAAGCAGGACAGTGTCTTCGATGTGTGGTTTGGATGGACAAGAAATTGTGA 1182 0.4721 MEEAQLPINSEGNPIRCKAAVCRNPGEPLVIEEIFVAPPMSREVRVRIICTSLCHSDLTFWKMKDPPGVFPRILGHEAVGVVESVGGGVSEVEKGDVVVPVFMPQCEECADCKSKRSNLCSKVPFRMSAWMPRHESSRFTDLNGQTIYHFLFVSSFSQYTVVDVANLTKIDHPSSVVPPDRACLLSCGVSTGVGAAWKTAEVEEGSTVAIFGLGSIGLAVAEGARLCGAARIIGVDLNPQKFEIGKKFGVTDFVNSGECGEKPVSQVIKEMTDGGADYCFECVGMASLVHEAYASCRKGWGKTIVVGVDKLGSRLSFSSAEVLGSGKCLMGCLFGGLKPKSHIPILLQRYINKELQLDDFVTHEMELEDINKAFDLLQAGQCLRCVVWMDKKL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1582 393 Pfam Alcohol dehydrogenase GroES-like domain 42 169 IPR013154 -
Prci8g1582 393 FunFam S-(hydroxymethyl)glutathione dehydrogenase 192 332 - -
Prci8g1582 393 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Prci8g1582 393 FunFam Alcohol dehydrogenase 6 20 204 - -
Prci8g1582 393 SUPERFAMILY GroES-like 10 202 IPR011032 -
Prci8g1582 393 Gene3D - 192 332 - -
Prci8g1582 393 PANTHER ALCOHOL DEHYDROGENASE 13 387 - -
Prci8g1582 393 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 177 352 IPR036291 -
Prci8g1582 393 Gene3D - 20 384 - -
Prci8g1582 393 Pfam Zinc-binding dehydrogenase 216 336 IPR013149 -
Prci8g1582 393 SUPERFAMILY GroES-like 340 388 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1582 Prci-Chr8 12788726 12798357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1582 42 190 Monolignol Biosynthesis Gene Families AT4G37970 30.000 1.17e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1582 K00121 - qsu:112018306 608.986