Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1569 ATGGGCAACTCCTGCATGAAGCCGGTTGCTCATGTTAATTCTTCCAATTTTTCTGGAAGTACAAAGTCAAGTAAGACACAGCGGAATTACAATTCTTCAGGACAAACAGCTTCTTTGCAAATTTCAGAATCAAATCTTGTCAGACCCATTTCCAATAATCTCAAGTCTTTTAGCTTCAATGATCTAAAGGAAGCCACAAAGAACTTCCGCGAAGAAAATTTTATTGGAGAGGGAGGTTTCGGGCGTGTCTTCAAGGGATGGATTAACACTAACACCTTTGCTCCCACAAAACCAGGGAGTGGGATGGTAGTGGCCATTAAGCAGCTCAAGCCAGAAAGTTTTCAAGGCCACAAGGAATGGCTTGCTGAAGTCAATTATCTAGGGCAGCTTCACCATGAAAATCTCGTGAAACTTATTGGTTATTGTTCGGAGGATAGAAATAGGCTTCTAGTTTATGAGTTCATGCAAAAAGGAAGCTTGGAGAATCATTTATTTAAAAGTGTTCAACCCATATCTTGGGCAACCCGGATGAGTATTGCAGTTGGTGTTGCAAGAGGATTAGCATTCTTGCATAGCCTAGATGCGAATGTCATCTATCGTGATTTAAAGGCGTCTAATGTCCTACTTGATTCAGATTTCAATCCAAAGCTTTCAGATTTTGGTTTGGCCAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACCAGAGTTATTGGAACTCAAGGCTATGCTGCTCCAGAGTACGTAGCAACAGGTCACTTGACTTCGAGAAGTGATGTCTACAGCTTTGGTGTCGTCTTGCTAGAGTTGCTAACCGGGAGACGAGCATTAGAAGATGACAGACCTGGGTCTATAGAAGAAACTCTGGTGGATTGGGCAAAACCTTTCCTGAGTGACAGCCGGCGAGTTTTGAGGATCATGGATACAAGACTAGGTGGCCAATACTCCAAGAAAGGAGCTCAAGCTGCAGCTGCACTTGCATTGCATTGCTTGACCTCAGATCCTAGATACAGACCTCCAATGGTAGATGTTCTTGCTGCATTGGAAGCTCTCAGTTCCTCAAGTTCAACCCCAAGGACACCAAAATCTGAGAGTGAGGATGTTTCAGCCAGGAATTCTAGTTCTAGTCATCCACAAAAGGCAATCAGACATTTAAAGTCTCTATGA 1170 0.4316 MGNSCMKPVAHVNSSNFSGSTKSSKTQRNYNSSGQTASLQISESNLVRPISNNLKSFSFNDLKEATKNFREENFIGEGGFGRVFKGWINTNTFAPTKPGSGMVVAIKQLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSEDRNRLLVYEFMQKGSLENHLFKSVQPISWATRMSIAVGVARGLAFLHSLDANVIYRDLKASNVLLDSDFNPKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTSRSDVYSFGVVLLELLTGRRALEDDRPGSIEETLVDWAKPFLSDSRRVLRIMDTRLGGQYSKKGAQAAAALALHCLTSDPRYRPPMVDVLAALEALSSSSSTPRTPKSESEDVSARNSSSSHPQKAIRHLKSL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1569 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Prci8g1569 389 Gene3D Phosphorylase Kinase; domain 1 44 154 - -
Prci8g1569 389 Pfam Protein tyrosine and serine/threonine kinase 73 346 IPR001245 GO:0004672|GO:0006468
Prci8g1569 389 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 155 363 - -
Prci8g1569 389 ProSiteProfiles Protein kinase domain profile. 69 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1569 389 CDD STKc_IRAK 75 345 - -
Prci8g1569 389 FunFam Serine/threonine-protein kinase BIK1 36 154 - -
Prci8g1569 389 SUPERFAMILY Protein kinase-like (PK-like) 54 371 IPR011009 -
Prci8g1569 389 MobiDBLite consensus disorder prediction 351 383 - -
Prci8g1569 389 ProSitePatterns Protein kinases ATP-binding region signature. 75 107 IPR017441 GO:0005524
Prci8g1569 389 Gene3D Transferase(Phosphotransferase) domain 1 155 377 - -
Prci8g1569 389 PANTHER OS01G0588500 PROTEIN-RELATED 29 352 - -
Prci8g1569 389 MobiDBLite consensus disorder prediction 12 37 - -
Prci8g1569 389 MobiDBLite consensus disorder prediction 351 389 - -
Prci8g1569 389 SMART serkin_6 69 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1569 Prci-Chr8 12692716 12697498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1569 13 378 Glycoside Hydrolase AT3G07070 45.238 1.28e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci8g1569 PK_Tyr_Ser-Thr 9.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1569 - - gmx:102664409 559.296