Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci8g1567 | ATGGCTAGAGAAATCAGAACAGGTGAAATTGTTGCTTTGAAGAAAATAAGAATGGACAATGAGAGAGAGGGGTTTCCTATAACTGCTATTCGTGAAATCAAAATTCTGAAGAAATTACACCATGAAAATGTTATTAAGTTGAAAGAGATTGTGACATCGCCAGGCCCTGAGAAAGACGAGCAAGGGAAGCCAGATGGTAACAAATATAAAGGTGGTATCTATATGGTGTTTGAATACATGGACCATGACTTGACTGGTCTTGCAGATCGACCTGGCATGAGATTTACAGTTCCCCAAATCAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCATTATTGCCATGTGAATCAAGTACTTCATCGTGATATAAAAGGCTCCAATCTTCTTATAGACAATGAAGGCAATCTGAAGCTTGCAGATTTTGGACTCGCACGATCATTTTCTAATGACCACAATGCAAATCTTACAAATCGTGTGATCACATTATGGTATAGACCCCCAGAGCTGCTGCTAGGAACAACAAAGTATGGACCTGCTGTTGATATGTGGTCTGTTGGATGTATCTTTGCCGAACTTCTTCATGGAAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAACTAAACAAAATTTTTGAGCTTTGTGGAGCGCCAGATGAAGTGAACTGGCCTGGGGTTTCAAAGTGTCCATGGTACAATCAGTTTAAACCAACAAGACCAATGAAAAGACGTCTGAGGGAAGTCTTCAGACATTTTGATCGTCATGCTTTAGAATTGTTGGAGAGGATGCTGACACTTGATCCTGCTCAGAGAATTACGGCTAAGGATGCACTTGATGCTGAGTATTTCTGGACTGATCCATTGCCATGTGATCCTAAGAGTTTACCCAAATATGAGTCATCACATGAGTTTCAGACAAAGAAAAAGCGGCAGCAACAACGACAACATGAAGAAAATGCCAAGCGTCAGAAACTGCAGCACCCTCAGCAACACACTCGGCTTCCCCCCATCCAGCAGCCAGGGCAACCTCATGCCCAAATGCGGCCAGGTCCAAACCCAAATATGCATAGCTCTCAGCCCGCGGTAGCTGGAGGCCCTAGCCATCATTACGGGAAACCTCGAGGCCCCTCTGGTGGGCCCGGTAGATATCCCCCTGGTGGGAACCCTGGTGGCGGATACAACCACCCAAACCGTGGAGGTCAAGGTGGAGGTGGTGGTTATGGCAATGGGCCATATCCTCCTCAAGGCCGAGGAGCACCTTATGGGTCAAGTGGTATGCCTGGTGCTGGTCCTCGTGGTGGAGGCGGTGGTGGTTATGGAGTTGGAGGCCCTAATTATCCCCAAGGTGGTCCATACAGCGGCTCAGGAGCCGGCCGTGGTTCGAACATGATGGGTGGAAACCGAAATCAGCAGTATGGTTGGCAGCAGTAA | 1434 | 0.4679 | MAREIRTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKCPWYNQFKPTRPMKRRLREVFRHFDRHALELLERMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEENAKRQKLQHPQQHTRLPPIQQPGQPHAQMRPGPNPNMHSSQPAVAGGPSHHYGKPRGPSGGPGRYPPGGNPGGGYNHPNRGGQGGGGGYGNGPYPPQGRGAPYGSSGMPGAGPRGGGGGGYGVGGPNYPQGGPYSGSGAGRGSNMMGGNRNQQYGWQQ | 477 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci8g1567 | 477 | CDD | STKc_CDK9_like | 1 | 284 | - | - | |
Prci8g1567 | 477 | Gene3D | Transferase(Phosphotransferase) domain 1 | 82 | 324 | - | - | |
Prci8g1567 | 477 | MobiDBLite | consensus disorder prediction | 297 | 326 | - | - | |
Prci8g1567 | 477 | FunFam | Cyclin-dependent kinase C-2 | 82 | 324 | - | - | |
Prci8g1567 | 477 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 119 | 131 | IPR008271 | GO:0004672|GO:0006468 | |
Prci8g1567 | 477 | SMART | serkin_6 | 1 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci8g1567 | 477 | Pfam | Protein kinase domain | 2 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci8g1567 | 477 | MobiDBLite | consensus disorder prediction | 461 | 477 | - | - | |
Prci8g1567 | 477 | PANTHER | CELL DIVISION PROTEIN KINASE | 2 | 290 | - | - | |
Prci8g1567 | 477 | ProSiteProfiles | Protein kinase domain profile. | 1 | 284 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci8g1567 | 477 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 292 | IPR011009 | - | |
Prci8g1567 | 477 | MobiDBLite | consensus disorder prediction | 295 | 477 | - | - | |
Prci8g1567 | 477 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 81 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci8g1567 | Prci-Chr8 | 12680675 | 12686832 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci8g1567 | 1 | 477 | Core Cell Cycle Gene Families | AT5G10270 | 77.547 | 0.0 | 724 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Prci8g1567 | Pkinase | 2.7e-66 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci8g1567 | K08819 | - | mnt:21403150 | 779.245 |