Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1567 ATGGCTAGAGAAATCAGAACAGGTGAAATTGTTGCTTTGAAGAAAATAAGAATGGACAATGAGAGAGAGGGGTTTCCTATAACTGCTATTCGTGAAATCAAAATTCTGAAGAAATTACACCATGAAAATGTTATTAAGTTGAAAGAGATTGTGACATCGCCAGGCCCTGAGAAAGACGAGCAAGGGAAGCCAGATGGTAACAAATATAAAGGTGGTATCTATATGGTGTTTGAATACATGGACCATGACTTGACTGGTCTTGCAGATCGACCTGGCATGAGATTTACAGTTCCCCAAATCAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCATTATTGCCATGTGAATCAAGTACTTCATCGTGATATAAAAGGCTCCAATCTTCTTATAGACAATGAAGGCAATCTGAAGCTTGCAGATTTTGGACTCGCACGATCATTTTCTAATGACCACAATGCAAATCTTACAAATCGTGTGATCACATTATGGTATAGACCCCCAGAGCTGCTGCTAGGAACAACAAAGTATGGACCTGCTGTTGATATGTGGTCTGTTGGATGTATCTTTGCCGAACTTCTTCATGGAAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAACTAAACAAAATTTTTGAGCTTTGTGGAGCGCCAGATGAAGTGAACTGGCCTGGGGTTTCAAAGTGTCCATGGTACAATCAGTTTAAACCAACAAGACCAATGAAAAGACGTCTGAGGGAAGTCTTCAGACATTTTGATCGTCATGCTTTAGAATTGTTGGAGAGGATGCTGACACTTGATCCTGCTCAGAGAATTACGGCTAAGGATGCACTTGATGCTGAGTATTTCTGGACTGATCCATTGCCATGTGATCCTAAGAGTTTACCCAAATATGAGTCATCACATGAGTTTCAGACAAAGAAAAAGCGGCAGCAACAACGACAACATGAAGAAAATGCCAAGCGTCAGAAACTGCAGCACCCTCAGCAACACACTCGGCTTCCCCCCATCCAGCAGCCAGGGCAACCTCATGCCCAAATGCGGCCAGGTCCAAACCCAAATATGCATAGCTCTCAGCCCGCGGTAGCTGGAGGCCCTAGCCATCATTACGGGAAACCTCGAGGCCCCTCTGGTGGGCCCGGTAGATATCCCCCTGGTGGGAACCCTGGTGGCGGATACAACCACCCAAACCGTGGAGGTCAAGGTGGAGGTGGTGGTTATGGCAATGGGCCATATCCTCCTCAAGGCCGAGGAGCACCTTATGGGTCAAGTGGTATGCCTGGTGCTGGTCCTCGTGGTGGAGGCGGTGGTGGTTATGGAGTTGGAGGCCCTAATTATCCCCAAGGTGGTCCATACAGCGGCTCAGGAGCCGGCCGTGGTTCGAACATGATGGGTGGAAACCGAAATCAGCAGTATGGTTGGCAGCAGTAA 1434 0.4679 MAREIRTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKCPWYNQFKPTRPMKRRLREVFRHFDRHALELLERMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEENAKRQKLQHPQQHTRLPPIQQPGQPHAQMRPGPNPNMHSSQPAVAGGPSHHYGKPRGPSGGPGRYPPGGNPGGGYNHPNRGGQGGGGGYGNGPYPPQGRGAPYGSSGMPGAGPRGGGGGGYGVGGPNYPQGGPYSGSGAGRGSNMMGGNRNQQYGWQQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1567 477 CDD STKc_CDK9_like 1 284 - -
Prci8g1567 477 Gene3D Transferase(Phosphotransferase) domain 1 82 324 - -
Prci8g1567 477 MobiDBLite consensus disorder prediction 297 326 - -
Prci8g1567 477 FunFam Cyclin-dependent kinase C-2 82 324 - -
Prci8g1567 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Prci8g1567 477 SMART serkin_6 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1567 477 Pfam Protein kinase domain 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1567 477 MobiDBLite consensus disorder prediction 461 477 - -
Prci8g1567 477 PANTHER CELL DIVISION PROTEIN KINASE 2 290 - -
Prci8g1567 477 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1567 477 SUPERFAMILY Protein kinase-like (PK-like) 2 292 IPR011009 -
Prci8g1567 477 MobiDBLite consensus disorder prediction 295 477 - -
Prci8g1567 477 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1567 Prci-Chr8 12680675 12686832 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1567 1 477 Core Cell Cycle Gene Families AT5G10270 77.547 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci8g1567 Pkinase 2.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1567 K08819 - mnt:21403150 779.245