Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1565 ATGGCTATTGCGGCCCCTGGGCAGCTGAACCTTAATGAGTACCCTTCATGGGGATCCAGAAGTGTTGATTGCTTCGAAAAGTTGGAGCAGATTGGCGAGGGAACTTATGGCCAAGTTTACATGGCTAGAGAAATCAGAACAGGTGAAATTGTTGCTTTGAAGAAAATAAGAATGGACAATGAGAGAGAGGGGTTTCCTATAACTGCTATTCGTGAAATCAAAATTCTGAAGAAATTACACCATGAAAATGTTATTAAGTTGAAAGAGATTGTGACATCGCCAGATGGTAACAAATATAAAGGTGGTATCTATATGGTGTTTGAATACATGGACCATGACTTGACTGGTCTTGCAGATCGACCTGGCATGAGATTTACAGTTCCCCAAATCAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCATTATTGCCATGTGAATCAAGTACTTCATCGTGATATAAAAGGCTCCAATCTTCTTATAGACAATGAAGGCAATCTGAAGCTTGCAGATTTTGGACTCGCACGATCATTTTCTAATGACCACAATGCAAATCTTACAAATCGTGTGATCACATTATGGTATAGACCCCCAGAGCTGCTGCTAGGAACAACAAAGTATGGACCTGCTGTTGATATGTGGTCTGTTGGATGTATCTTTGCCGAACTTCTTCATGGAAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAACTAAACAAAATTTTTGAGCTTTGTGGAGCGCCAGATGAAGTGAACTGGCCTGGGGTTTCAAAGTGTCCATGGTACAATCAGTTTAAACCAACAAGACCAATGAAAAGACGTCTGAGGGAAGTCTTCAGACATTTTGATCGTCATGCTTTAGAATTGTTGGAGAGGATGCTGACACTTGATCCTGCTCAGAGAATTACGGCTAAGGATGCACTTGATGCTGAGTATTTCTGGACTGATCCATTGCCATGTGATCCTAAGAGTTTACCCAAATATGAGTCATCACATGAGTTTCAGACAAAGAAAAAGCGGCAGCAACAACGACAACATGAAGAAAATGCCAAGCGTCAGAAACTGCAGCACCCTCAGCAACACACTCGGCTTCCCCCCATCCAGCAGCCAGGGCAACCTCATGCCCAAATGCGGCCAGGTCCAAACCCAAATATGCATAGCTCTCAGCCCGCGGTAGCTGGAGGCCCTAGCCATCATTACGGGAAACCTCGAGGCCCCTCTGGTGGGCCCGGTAGATATCCCCCTGGTGGGAACCCTGGTGGCGGATACAACCACCCAAACCGTGGAGGTCAAGGTGGAGGTGGTGGTTATGGCAATGGGCCATATCCTCCTCAAGGCCGAGGAGCACCTTATGGGTCAAGTGGTATGCCTGGTGCTGGTCCTCGTGGTGGAGGCGGTGGTGGTTATGGAGTTGGAGGCCCTAATTATCCCCAAGGTGGTCCATACAGCGGCTCAGGAGCCGGCCGTGGTTCGAACATGATGGGTGGAAACCGAAATCAGCAGTATGGTTGGCAGCAGTAA 1524 0.4678 MAIAAPGQLNLNEYPSWGSRSVDCFEKLEQIGEGTYGQVYMAREIRTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKCPWYNQFKPTRPMKRRLREVFRHFDRHALELLERMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEENAKRQKLQHPQQHTRLPPIQQPGQPHAQMRPGPNPNMHSSQPAVAGGPSHHYGKPRGPSGGPGRYPPGGNPGGGYNHPNRGGQGGGGGYGNGPYPPQGRGAPYGSSGMPGAGPRGGGGGGYGVGGPNYPQGGPYSGSGAGRGSNMMGGNRNQQYGWQQ 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1565 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Prci8g1565 507 ProSiteProfiles Protein kinase domain profile. 25 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1565 507 MobiDBLite consensus disorder prediction 325 507 - -
Prci8g1565 507 PANTHER CELL DIVISION PROTEIN KINASE 23 320 - -
Prci8g1565 507 CDD STKc_CDK9_like 25 314 - -
Prci8g1565 507 Gene3D Phosphorylase Kinase; domain 1 12 111 - -
Prci8g1565 507 Gene3D Transferase(Phosphotransferase) domain 1 112 354 - -
Prci8g1565 507 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Prci8g1565 507 Pfam Protein kinase domain 25 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1565 507 FunFam Cyclin-dependent kinase C-2 12 111 - -
Prci8g1565 507 SUPERFAMILY Protein kinase-like (PK-like) 18 322 IPR011009 -
Prci8g1565 507 FunFam Cyclin-dependent kinase C-2 112 354 - -
Prci8g1565 507 SMART serkin_6 25 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1565 507 MobiDBLite consensus disorder prediction 491 507 - -
Prci8g1565 507 MobiDBLite consensus disorder prediction 327 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1565 Prci-Chr8 12680132 12686832 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1565 1 507 Core Cell Cycle Gene Families AT5G10270 76.820 0.0 767
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci8g1565 Pkinase 3.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1565 K08819 - mnt:21403150 828.165