Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1564 ATGGGCTTGAGTGTATTGTTTTTTATCAAACTGTCATTAGTAGCCTTCACACTGGCATCGCCGGAGCCGGCCCCAGCAGCCTCCAAGAAAGCGGGCTGCGATACCATGTGCGCGGACGTGAAAATCTCTTATCCTTTCGGCACAACCGAAGACTGCTTCAAAGATCCTGATTTTCTGATAACTTGCAACACTTCCTCTGGATTCCCCGTTCCTTATCTAGGAACAAAAACCACTATCCAAGTTCTCAACATCTCTGGGGTGACCAGTGAGCTACTCGTCTTCACTCCAGTTTATCATCATTGCTACAACCCCGAAGAAGGCATTTATTGGAGAAAAGGCTTTCGTGCGCCTCCCAAGTTCGCCATATCCAATAAAAAGAACGATTTCGTCGTCGTCGGGCGTAACACCTACGCTTTCCTCTACGACATTGAAGAAAAAAGACTCATCGGCTGCAACTCAGAGTGTAGTTACGACGAATCCGTGACAAAAGGATCCTGCTCCGGCTCCGGCTGCTGCCGGACTAATTTTGGGCAACCTATTAGAAATTATACTAACAGTATTTTCTTTTACGGTGACCGAAACGTGTTAGACGGCGTCTTGTTTAATTGCAGTCATGCTTTTTTTGCCAAGAACGGAACTTTCAACTTTTCCGACGAAGACTTTGACGATCTAGTCCGACTTGAAAGATCTACGGTGGTACTGGATTGGGGTGTTGATGAGACGAAATCATGCGGTGGAGCCTGCAAAGATGATGAAAGTATATGCGAAGAATCACAAAGTGTCAAAGGCTACTACCTCTGCAAATGTAAACCAGGGTTTGAAGGCAACCCCTACGTCTCCGGTGGCTGCAAAGATGTGGATGAGTGCCATAGCATCAATAATTGCACGGCTTCGGCAGTTTGCACCAATTATTATGGTGGCTACACCTGTACTTGCCCAACTGGACAAAAAGGTAATGGCCTCAAAAACGAAACTGGACCGGGTTCGGACTGCAGCATTCTGGATCCGGATTCTAATCAGGATTGGCGCGTCATTACAATTTCATTAGTTGTTGCTGTAGCTTTGTTGGTTGTCTTCACACTGCTCTTTGCATTATGTTGGGCACAAAAGCAAAGAAGTTTGAGACAACTAAGAGAAAGAAATTTTGAGCAAAATGGAGGAAACTTGCTTCTCCAACAATTTTCTCAACGACAAGGATATACTGAAAGGGCCAAGATCTTTACAGAAAATGAGCTTAAGAATGCCACAAATAACTTTGATGAAAGTAGGATTCTTGGTCGTGGAGGACAAGGCACGGTTTATAAGGGTATGTTGCCAAACAACACACCTGTTGCCATTAAAAAGTCTAGAGTTGGAGGGGATCCCCAAAATATTAAAAGTTTTATTAATGAAGTATTTGTTCTTTCCCAGATCAACCATCGAAATGTGGTCAAACTTTTAGGATGTTGTCTTGAAACTGAAGTGCCTTTATTAGTTTATGAGTTTATAGACAATGGCACCCTTCTTGACCACCTAAGCCCATCAAAGAAAGATTGTTCTATTACATGGGAGACTCGGTTAAGAATAGCTGTAGAGACTGCAGAGGCCATTTCATATTTACACTCTACTGCTTCTATTCCAATTATCCATCGAGATATTAAATCTGCAAACATACTATTAGATCATGACAACAGAGCAAAGGTGTCTGATTTTGGAGCTTCAAGACTAGTCCATCTTGATGAAGCTCAAGTTGCCACTGTGATCCAAGGAACAATAGGATACTTAGATCCAGAATACCTCCAAACTGGCCAAATGAATGAAAAGAGCGATGTTTATAGTTTTGGGATTGTGCTTATAGAATTACTCACTGGGAAAAGAGCATTTAAATTCAATAATGCAATGGCCAGTCACTTCATGTCTTCAATGAGAGAAGACCGCTTGTGGGAAATTCTTGATAAGCAAGTGCTAGATGAAAAGAAGAATGCAAAACAATTGAAGGAAGGAGCCTTATTGGCACAAAGATGCATCAGAGTTAATGGAGAGGAAAGGCCAACAATGAAGGAAGTAGCAATGGAATTACAGGGCCTGATAGTAATGGAAAAACATGTTCAAGGGAAGGACAAGGATATGATGGTTGAAGAAAGTGAACACTTACTTGATCATTTTCCTAATGATGGATATGAGAGTGCTAGTGCAAGTACATTAGTTACCAGCTATGATAGCACTCAAAAGCAAGTTGTCTTTGAGATCATAGATAGTGGGCGATGA 2247 0.4215 MGLSVLFFIKLSLVAFTLASPEPAPAASKKAGCDTMCADVKISYPFGTTEDCFKDPDFLITCNTSSGFPVPYLGTKTTIQVLNISGVTSELLVFTPVYHHCYNPEEGIYWRKGFRAPPKFAISNKKNDFVVVGRNTYAFLYDIEEKRLIGCNSECSYDESVTKGSCSGSGCCRTNFGQPIRNYTNSIFFYGDRNVLDGVLFNCSHAFFAKNGTFNFSDEDFDDLVRLERSTVVLDWGVDETKSCGGACKDDESICEESQSVKGYYLCKCKPGFEGNPYVSGGCKDVDECHSINNCTASAVCTNYYGGYTCTCPTGQKGNGLKNETGPGSDCSILDPDSNQDWRVITISLVVAVALLVVFTLLFALCWAQKQRSLRQLRERNFEQNGGNLLLQQFSQRQGYTERAKIFTENELKNATNNFDESRILGRGGQGTVYKGMLPNNTPVAIKKSRVGGDPQNIKSFINEVFVLSQINHRNVVKLLGCCLETEVPLLVYEFIDNGTLLDHLSPSKKDCSITWETRLRIAVETAEAISYLHSTASIPIIHRDIKSANILLDHDNRAKVSDFGASRLVHLDEAQVATVIQGTIGYLDPEYLQTGQMNEKSDVYSFGIVLIELLTGKRAFKFNNAMASHFMSSMREDRLWEILDKQVLDEKKNAKQLKEGALLAQRCIRVNGEERPTMKEVAMELQGLIVMEKHVQGKDKDMMVEESEHLLDHFPNDGYESASASTLVTSYDSTQKQVVFEIIDSGR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1564 748 CDD EGF_CA 285 318 - -
Prci8g1564 748 SMART serkin_6 419 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1564 748 SUPERFAMILY Protein kinase-like (PK-like) 401 686 IPR011009 -
Prci8g1564 748 Pfam Protein kinase domain 420 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1564 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Prci8g1564 748 FunFam Wall-associated receptor kinase 2 389 495 - -
Prci8g1564 748 Pfam Wall-associated receptor kinase galacturonan-binding 33 89 IPR025287 GO:0030247
Prci8g1564 748 ProSiteProfiles Protein kinase domain profile. 419 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1564 748 Gene3D Laminin 238 324 - -
Prci8g1564 748 Gene3D Transferase(Phosphotransferase) domain 1 496 711 - -
Prci8g1564 748 Pfam Calcium-binding EGF domain 285 319 IPR001881 GO:0005509
Prci8g1564 748 ProSitePatterns Calcium-binding EGF-like domain signature. 285 310 IPR018097 GO:0005509
Prci8g1564 748 SUPERFAMILY EGF/Laminin 285 319 - -
Prci8g1564 748 CDD STKc_IRAK 425 689 - -
Prci8g1564 748 ProSiteProfiles EGF-like domain profile. 285 319 IPR000742 -
Prci8g1564 748 Gene3D Phosphorylase Kinase; domain 1 391 495 - -
Prci8g1564 748 SMART egfca_6 285 332 IPR001881 GO:0005509
Prci8g1564 748 FunFam Wall-associated receptor kinase 2 496 709 - -
Prci8g1564 748 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 690 IPR045274 GO:0007166
Prci8g1564 748 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 301 312 IPR000152 -
Prci8g1564 748 FunFam Fibrillin 2 280 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1564 Prci-Chr8 12642165 12648467 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1564 27 748 Receptor kinase-like Gene Family AT1G21230 43.391 3.99e-179 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci8g1564 Pkinase 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1564 - - pcin:129317315 991.104