Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1561 TTTGAAGAAATAAGAATGGACAATGAGAGAGAGGGTTTTCCTATAACTGCCATTCGTGAAATTAAAATTCTGACGAAATTACACCATGAAAATGTTAAGTTGAAAGAGATTGTGACATCCCCAAGCCCTGAGATAGACCAGCAAGGGAAGCCAGATCATTACAAATATAAAGGTGGTATCTATATGGTATTTGAATACATGGACCATGGTTTGACTGGTCTTGCAGATCGACCTGGGATGAGATTTACAGTTCCCCAGATCAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCCTTATTGTCATGTGAATCAAGTACTTCATCGTGACATAAAAGGCTCCAATCTTATAGACAATGAAGGCAATCTGAAGCTTGTAGATTTTGGTCTTGCAGGATCATTTTCTAATGACCACAATGCAAATCACCTCCTAAAAGCTCCAAAAAACAAACCCTGCCAGCCCCAATGTCGTACTCTCTCAAGTTCTCCTGTTTTCTTCCTTTCTGTTCAGCCTCCAATCGCGTCTGATTTAACTAAACTTTGCATTGTCCGCCGTGACGCAGCGGATGCATGGTACAGAAGCCCAACTCATGATTTAGGTCCTTCAGTTGGGCCCAGATACTTGATCAATGAGTCTCTCATTTTTGTTGTATTTGAAGCTCTTGATGTTTAA 672 0.4092 FEEIRMDNEREGFPITAIREIKILTKLHHENVKLKEIVTSPSPEIDQQGKPDHYKYKGGIYMVFEYMDHGLTGLADRPGMRFTVPQIKCYMRQLLTGLPYCHVNQVLHRDIKGSNLIDNEGNLKLVDFGLAGSFSNDHNANHLLKAPKNKPCQPQCRTLSSSPVFFLSVQPPIASDLTKLCIVRRDAADAWYRSPTHDLGPSVGPRYLINESLIFVVFEALDV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1561 223 Pfam Protein kinase domain 5 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1561 223 SMART serkin_6 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1561 223 ProSiteProfiles Protein kinase domain profile. 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1561 223 Gene3D Phosphorylase Kinase; domain 1 1 68 - -
Prci8g1561 223 Gene3D Transferase(Phosphotransferase) domain 1 69 206 - -
Prci8g1561 223 PANTHER CELL DIVISION PROTEIN KINASE 3 195 - -
Prci8g1561 223 SUPERFAMILY Protein kinase-like (PK-like) 4 138 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1561 Prci-Chr8 12544982 12598294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1561 1 141 Core Cell Cycle Gene Families AT5G10270 83.217 1.27e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci8g1561 Pkinase 5.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1561 K08819 - pcin:129317322 462.996