Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci8g1561 | TTTGAAGAAATAAGAATGGACAATGAGAGAGAGGGTTTTCCTATAACTGCCATTCGTGAAATTAAAATTCTGACGAAATTACACCATGAAAATGTTAAGTTGAAAGAGATTGTGACATCCCCAAGCCCTGAGATAGACCAGCAAGGGAAGCCAGATCATTACAAATATAAAGGTGGTATCTATATGGTATTTGAATACATGGACCATGGTTTGACTGGTCTTGCAGATCGACCTGGGATGAGATTTACAGTTCCCCAGATCAAGTGTTACATGAGACAGCTTTTGACGGGGCTTCCTTATTGTCATGTGAATCAAGTACTTCATCGTGACATAAAAGGCTCCAATCTTATAGACAATGAAGGCAATCTGAAGCTTGTAGATTTTGGTCTTGCAGGATCATTTTCTAATGACCACAATGCAAATCACCTCCTAAAAGCTCCAAAAAACAAACCCTGCCAGCCCCAATGTCGTACTCTCTCAAGTTCTCCTGTTTTCTTCCTTTCTGTTCAGCCTCCAATCGCGTCTGATTTAACTAAACTTTGCATTGTCCGCCGTGACGCAGCGGATGCATGGTACAGAAGCCCAACTCATGATTTAGGTCCTTCAGTTGGGCCCAGATACTTGATCAATGAGTCTCTCATTTTTGTTGTATTTGAAGCTCTTGATGTTTAA | 672 | 0.4092 | FEEIRMDNEREGFPITAIREIKILTKLHHENVKLKEIVTSPSPEIDQQGKPDHYKYKGGIYMVFEYMDHGLTGLADRPGMRFTVPQIKCYMRQLLTGLPYCHVNQVLHRDIKGSNLIDNEGNLKLVDFGLAGSFSNDHNANHLLKAPKNKPCQPQCRTLSSSPVFFLSVQPPIASDLTKLCIVRRDAADAWYRSPTHDLGPSVGPRYLINESLIFVVFEALDV | 223 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci8g1561 | 223 | Pfam | Protein kinase domain | 5 | 142 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci8g1561 | 223 | SMART | serkin_6 | 1 | 223 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci8g1561 | 223 | ProSiteProfiles | Protein kinase domain profile. | 1 | 223 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci8g1561 | 223 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 68 | - | - | |
Prci8g1561 | 223 | Gene3D | Transferase(Phosphotransferase) domain 1 | 69 | 206 | - | - | |
Prci8g1561 | 223 | PANTHER | CELL DIVISION PROTEIN KINASE | 3 | 195 | - | - | |
Prci8g1561 | 223 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 138 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci8g1561 | Prci-Chr8 | 12544982 | 12598294 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci8g1561 | 1 | 141 | Core Cell Cycle Gene Families | AT5G10270 | 83.217 | 1.27e-77 | 240 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Prci8g1561 | Pkinase | 5.6e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci8g1561 | K08819 | - | pcin:129317322 | 462.996 |