Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1534 ATGGGTTTAAGTGCATTATTGCTTTTGAGATTGGCACTAGTTGCCTTCACCCTTGTAGCAGTGGTAGCAGAACAAGAATCGAAACCAGACTGTGATACTAAGTGCGGGGACGTGACCATCCTATATCCCTTTGGCACAAGGGAAGGCTGCTTCAAAGATGAAGCTTTTCATATAATCTGCGACAAAAAGAAGAACCAGCAGCAGCAGAATCCGATTCCATATTTAGGAGCAAACAACACTTTCCAAGTCCTCAACATCTCCGGGGATCGTAATGAGCTGCACGTCTCTGTCCCGGTTCAATCTGGTTGCTATAATCCCAATGAAACAAATTATTGGAGGAAAACTTATTTAACGCCTCACAAGTTTGCCATCTCCAATAAAATGAACAAGTTCATCGTAGTTGGCTGTTACACCGTCTCTTCCCTCTTTGACCGCAAAGAAAATAAGTATAATGGCTGCGAAACGAAATGCACTGATGAGTGGAGATCCGTGACTGTTAAAACTTCCTCTGGCTTTTGTTGCCAGACCCCTTTCGACCGAGCCCTTACAAATTATTCTGTTAGTCTTTTTAATTTCTATGATGGCTCGAACGTTTCTGAGAACTTCGTGCCTTGCAGCTACTCATTTTTTGCAGAGACTAATGAATCTTTCAAGTTTTCGTACAAAGATCTCCAGAGTCTAGGGAAAAGCAACAGATCTACTGTGGTTCTCGATTGGGCTGTTGACAGTAAGAAATCTTGCGGTGGAGCTTGCAAAAGTAAAGAAAGTAGATGCGAAGAATCGGAGAGTATCAGTGGCTACTACGTCTGCAAATGCAAACCAGGGTTCCAAGGAAACCCGTACCTCTCCGATGGTTGCCAAGATGTGGATGAGTGCCTCGACAAATCCTTACATGATTGCATCGATCAGAATCATTGCCACAATTTTGATGGTAGCTACAAATGTGACTCTGGAAAGGAGTGGCTTATCATTAAAATCTCAATAGGTGTTATTATAGCTTTGTTGGTTGCCTTCACACTGCTCTCTGCGTTATGTTGGGCACAAAAGCAAAGAAGTCTGAAACAACTAAAAGAAAGAAATTTTGAGCAAAATGGAGGAAACTTGCTTCTCCAACAATTTTCTCAACGACAAGGATATACTGAAAGGGCCAGGATCTTTACAGAAGAAGAGCTTAAGAATGCCACAAATAACTTTGATGAAAGTAGGATTCTTGGTTGCGGAGGACAAGGCACGGTTTATAAGGGTACGTTGTCAAACAATACACCTGTTGCCATTAAAAAGTCTAGAGTTGGAGGGGATCCCCAAAATATTAAAAGTTTTATCAATGAAGTATTTGTTCTTTCTCAAATCAACCATCGGAATGTGGTCAAACTTTTGGGATGTTGTCTTGAAACTGAAGTGCCTTTATTAGTTTATGAGTTTGTAGACAATGGCACCCTTCTTGACCACCTAAGCCCATCAACAAATGATTGTTCTATTACATGGAAGACTCGACTAAGAATAGCTGTAGAGACTGCAGAGGCCATTTCATATTTACACTCTGCTGCTTCTATTCCAATTATCCATCGAGATATTAAATCTGCCAACATACTATTAGACCATGACAATAGAGCAAAGGTATCTGATTTTGGAGCTTCAAGAATTGTCCATCTTGATGAAGCTCAAGTTGCCACTGTGATCCAAGGAACAATAGGATACTTAGATCCAGAGTACCTCCAAACTGGCCAATTGAATGAAAAGAGTGATGTTTACAGTTTTGGGATTGTGCTTGTGGAACTACTCACTGGAAAAAGAGCATTTAAATTCAATAATGCAATGGCTAATCACTTTGTGTGTTCAATGAGAGAAGACCGCTTGTGGAAAATTCTTGATAAGCGTGTGCTAGACCAAAAGGAGAATGCAAAACAATTGAAGGAAGTAGCCTTATTGGCACAAAGGTGCATTAGAGTTAATGGAGAGGAAAGGCCAACAATGAAGGAAGTAGCAATGGAATTAGAGGGTCTAAGAGCGATGGAAAAAAATCTTCAAGAAAAGGAGAAGGATATGATGGTAGAAGAAAGTGAACACTTACTTGGTCATTTTCCTAATGATGGATATGGGAGTGCTAGTACAAGTATTTCAGTTTCAAGTTATGCTAGAATTCAAAAGCAAATTGCCTTTGAGATTGTAGATGGAGGGCGATGA 2184 0.4043 MGLSALLLLRLALVAFTLVAVVAEQESKPDCDTKCGDVTILYPFGTREGCFKDEAFHIICDKKKNQQQQNPIPYLGANNTFQVLNISGDRNELHVSVPVQSGCYNPNETNYWRKTYLTPHKFAISNKMNKFIVVGCYTVSSLFDRKENKYNGCETKCTDEWRSVTVKTSSGFCCQTPFDRALTNYSVSLFNFYDGSNVSENFVPCSYSFFAETNESFKFSYKDLQSLGKSNRSTVVLDWAVDSKKSCGGACKSKESRCEESESISGYYVCKCKPGFQGNPYLSDGCQDVDECLDKSLHDCIDQNHCHNFDGSYKCDSGKEWLIIKISIGVIIALLVAFTLLSALCWAQKQRSLKQLKERNFEQNGGNLLLQQFSQRQGYTERARIFTEEELKNATNNFDESRILGCGGQGTVYKGTLSNNTPVAIKKSRVGGDPQNIKSFINEVFVLSQINHRNVVKLLGCCLETEVPLLVYEFVDNGTLLDHLSPSTNDCSITWKTRLRIAVETAEAISYLHSAASIPIIHRDIKSANILLDHDNRAKVSDFGASRIVHLDEAQVATVIQGTIGYLDPEYLQTGQLNEKSDVYSFGIVLVELLTGKRAFKFNNAMANHFVCSMREDRLWKILDKRVLDQKENAKQLKEVALLAQRCIRVNGEERPTMKEVAMELEGLRAMEKNLQEKEKDMMVEESEHLLGHFPNDGYGSASTSISVSSYARIQKQIAFEIVDGGR 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1534 727 FunFam Wall-associated receptor kinase 2 475 688 - -
Prci8g1534 727 Pfam Calcium-binding EGF domain 288 316 IPR001881 GO:0005509
Prci8g1534 727 CDD EGF_CA 288 316 - -
Prci8g1534 727 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 677 IPR045274 GO:0007166
Prci8g1534 727 Gene3D Laminin 244 324 - -
Prci8g1534 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Prci8g1534 727 SUPERFAMILY Protein kinase-like (PK-like) 384 686 IPR011009 -
Prci8g1534 727 FunFam Wall-associated receptor kinase 2 368 474 - -
Prci8g1534 727 Coils Coil 658 688 - -
Prci8g1534 727 CDD STKc_IRAK 404 668 - -
Prci8g1534 727 ProSitePatterns Calcium-binding EGF-like domain signature. 288 315 IPR018097 GO:0005509
Prci8g1534 727 Pfam Protein kinase domain 399 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1534 727 Gene3D Phosphorylase Kinase; domain 1 370 474 - -
Prci8g1534 727 SMART serkin_6 398 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1534 727 Gene3D Transferase(Phosphotransferase) domain 1 475 691 - -
Prci8g1534 727 Pfam Wall-associated receptor kinase galacturonan-binding 31 95 IPR025287 GO:0030247
Prci8g1534 727 ProSiteProfiles Protein kinase domain profile. 398 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1534 Prci-Chr8 12376137 12382449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1534 8 692 Receptor kinase-like Gene Family AT1G21230 42.562 7.00e-180 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci8g1534 Pkinase 2.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1534 - - pcin:129317315 1426.38