Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1533 ATGGGCTTGAGTTTATTGCTTTTGATCAAACTGTCATTAGTAGCCTCCACACTGGCATCGCCGGCGCCGGCGCTAGCAGCCGCCAAGAAAGCGGGCTGCGATACCATGTGCGGGGACGTGAAAATCTCTTATCCCTTCGGCACAACCAAAGACTGCTTCAAAGATCCTGATTTTCTGATAACCTGCAGCACTTCGTCTAGATTCCCCGTTCCTTATCTAGGAACCAAAAACAACATCCGAGTTCTCAACATCTCTGGGGAGACCAGTGAGCTGCTTGTCTTCACTCCAGTTTATCATGATTGCTACGATCCCGATGAAGGCATTTATTGGACCAAAGGCTTTCGTGCGCCTTCCAAATTCGCCATATCCAATACAAAGAACGATTTCGTCGTCGTTGGGTGTAACACCTACGCTTTCTTCTACGATATCGAAGAACAAAAACTCTTCGGCTGCAACTCAGAGTGCAGTTACGAGGAACCCTTGGCAAAAGGATCTTGCTCCGGCGCCGGCTGCTGCCGGACTAATTTTGGGCAACCCATTAGAAATTATACTAACAGTATTGTTTTTTATGGTGACCGAAACGTGTCCGACGGCTTCTTGTTTAACTGCAGTTATGCGTTTTTTGCCAAGCACGGAACTTTCAACTTTTCCGACAGCGACCTCCACGATCTAAGCGTACGCAAAAGATCTACTGTGGTACTGAATTGGGGTGTTGATCAGACGAAATCATGCGGTGGAGCCTGCAAAGACGATGAAAGTATATGCGAAGAATCACAAAGTGTCAAAGGCTACTACCTCTGCAAATGTAAACCAGGTTTTGAAGGCAACCCCTACCTCTCCGGTGGCTGCAAAGATGTGGACGAGTGCCATGGCATCAATAATTGCACGGAGTCGGCAGTTTGCACCAATTACAATGGTAGCTACACATGTACTTGTCCAAGTGGGCAAAAAGGTAATGGCCTCAAAAACGAAACTGGACCGGGTTCGGGCTGCAGAATTCCGGATGCGGACTCTAATCACGATGGGCGTGTCATTATAATTTCATTAGTTGTTGCTGTAGCTTTGTTGGTTGTCCTCACAGTGCTTTTTGCATTATGTTGGGCACAAAAGAAAAGAAGTTTGAGACAACTAAGAAAAAGAAATTTTGAGCAAAATGGAGGAAACTTGCTTCTACAACAATTTTCACAACGACAATATACTGAAAGGGCTAAGATCTTTACAGAAGATGAGCTTAAGAATGCCACAAACAACTTTGATGAAAGTAGGATCCTTGGTCGTGGAGGACAAGGCACGGTTTATAAGGGTACGTTGTCAAACAACACACATGTTGCCATTAAAAAGTCTAAAGTTGGAGGGGATTCCCAAAATATTAAAAGTTTCATCAATGAAGTATTTGTACTTTCCCAGATCAATCATCGGAATGTGGTCAAACTTTTGGGGTGCTGTCTTGAAACTGAAGTGCCTTTATTAGTTTATGAGTTTGTAGACAATGGCACTCTTCTTGACCACCTAAGCCCATCAAAAAATTATTGTTCTATTACATGGGAGACTCGATTAAGAATAGCTATAGAGATAGCAGGGGCCATTTCATATTTGCATTCTGCTGCTTCTATTCCAATTATCCATCGGGATATTAAATCTGCCAACATACTATTAGACCATGACAATAGAGCAAAGGTGTCTGATTTTGGAGCTTCAAGACTTGTCCATCTTGATAAAACTCAAGTTGCTACCGTGATCCAAGGAACAATAGGATACTTGGATCCGGAGTATCTCCAAACTGGCCAGTTGAATGAAAAGAGTGATGTTTATAGTTTTGGGATTGTACTTGTGGAATTACTCACCGGGAAAAAAGCATTTGAATTCAATGGGTTGACTAGTCACTTTATATCTTCCATGAGAGAAGACTGCTTGTGGGAAATTCTTGATAAGCGAGTGCTAGACCCAAAGAAGAATGCAAAACAATTGAAAGAAGTAGCCTCATTGGCAAGAAGGTGCATTAGAGTTAATGGAGAGGAAAGGCCAACAATGAAGGAAGTAGCAATGGAATTAGAGGCTCTTATGGCAATGGAAAAAAACCTTCAAGGGAAGGACAAGGATATGATGGTAGAAGAAAGTGAATATTTGGTTAGTAATTTTCCTAATGATGGATATGAGAGTGCTAGTGCAAGTATTTCAGTTGTGAGTTATGATAGCATTCAAAAGCAAGTTCCCTTTGAGATTGTAGATGGAGGGCGATGA 2241 0.4257 MGLSLLLLIKLSLVASTLASPAPALAAAKKAGCDTMCGDVKISYPFGTTKDCFKDPDFLITCSTSSRFPVPYLGTKNNIRVLNISGETSELLVFTPVYHDCYDPDEGIYWTKGFRAPSKFAISNTKNDFVVVGCNTYAFFYDIEEQKLFGCNSECSYEEPLAKGSCSGAGCCRTNFGQPIRNYTNSIVFYGDRNVSDGFLFNCSYAFFAKHGTFNFSDSDLHDLSVRKRSTVVLNWGVDQTKSCGGACKDDESICEESQSVKGYYLCKCKPGFEGNPYLSGGCKDVDECHGINNCTESAVCTNYNGSYTCTCPSGQKGNGLKNETGPGSGCRIPDADSNHDGRVIIISLVVAVALLVVLTVLFALCWAQKKRSLRQLRKRNFEQNGGNLLLQQFSQRQYTERAKIFTEDELKNATNNFDESRILGRGGQGTVYKGTLSNNTHVAIKKSKVGGDSQNIKSFINEVFVLSQINHRNVVKLLGCCLETEVPLLVYEFVDNGTLLDHLSPSKNYCSITWETRLRIAIEIAGAISYLHSAASIPIIHRDIKSANILLDHDNRAKVSDFGASRLVHLDKTQVATVIQGTIGYLDPEYLQTGQLNEKSDVYSFGIVLVELLTGKKAFEFNGLTSHFISSMREDCLWEILDKRVLDPKKNAKQLKEVASLARRCIRVNGEERPTMKEVAMELEALMAMEKNLQGKDKDMMVEESEYLVSNFPNDGYESASASISVVSYDSIQKQVPFEIVDGGR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1533 746 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 688 IPR045274 GO:0007166
Prci8g1533 746 CDD EGF_CA 285 318 - -
Prci8g1533 746 SMART serkin_6 418 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1533 746 FunFam Fibrillin 2 280 324 - -
Prci8g1533 746 SMART egfca_6 285 332 IPR001881 GO:0005509
Prci8g1533 746 FunFam Wall-associated receptor kinase 2 389 494 - -
Prci8g1533 746 Gene3D Transferase(Phosphotransferase) domain 1 495 710 - -
Prci8g1533 746 ProSiteProfiles Protein kinase domain profile. 418 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1533 746 Gene3D Phosphorylase Kinase; domain 1 391 494 - -
Prci8g1533 746 CDD STKc_IRAK 424 687 - -
Prci8g1533 746 ProSitePatterns Calcium-binding EGF-like domain signature. 285 310 IPR018097 GO:0005509
Prci8g1533 746 Pfam Calcium-binding EGF domain 285 319 IPR001881 GO:0005509
Prci8g1533 746 FunFam Wall-associated receptor kinase 2 495 707 - -
Prci8g1533 746 ProSiteProfiles EGF-like domain profile. 285 319 IPR000742 -
Prci8g1533 746 SUPERFAMILY Protein kinase-like (PK-like) 404 703 IPR011009 -
Prci8g1533 746 Pfam Wall-associated receptor kinase galacturonan-binding 33 91 IPR025287 GO:0030247
Prci8g1533 746 Pfam Protein kinase domain 419 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g1533 746 Gene3D Laminin 241 324 - -
Prci8g1533 746 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 301 312 IPR000152 -
Prci8g1533 746 SUPERFAMILY EGF/Laminin 285 319 - -
Prci8g1533 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1533 Prci-Chr8 12356515 12360977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1533 25 744 Receptor kinase-like Gene Family AT1G21230 44.415 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci8g1533 Pkinase 1.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1533 - - pcin:129317315 931.398