Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1492 ATGAGGAAGAAACTCGATACTCGTTTTCCGGCTGCTCGGATTAAGAAAATTATGCAATCGGATGAGGATGTAGGGAAGATTGCCATGGCCGTGCCTCTTCTTGTTTCCAAAGCACTAGAACTCTTTTTGCAAGATTTATGTGATCGGACGTATGAAATAACGTTGAGAAGAGGGGCAAAGACAATGAATTCTTTCCATTTAAAACAGTGTGTACAGACTTTTAATGTCTTCGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGCCATGCTGCTTCTGGAGATGACCGTACTGTCTGTAAGAGAAGGAAGGTTGATGATGATGGAAATGACAGTGAAGATGATGCAAAGAGAAATAAGATGCCAGAAAATGCACATCATGCTGGTGGTAGAGGAAGGGGTCGGGGCAGAGGCAGGGGTCGTGGCCGAGGAAGTAGAACAATGGATCGAGAGATGACTGCAAATGTCAAGTCTGAAGATGATCATCATACTGATGCATTGAAGCATCATGACATGTGCACTCACAGCGATGAAAACATGGAAATTGGCACAGAACATGAAGTGAAGCCTTCCATTAGCAAGACATCAGAAGCATGCTTTAGAGATTTTGACTTAAATATGGATCCTGTGGATGAAGACGGGGATTCGCCGACCAGCATAGCTCCTGTTCCACAACCTTGTCCATCCGTAAAACCAACTCCAACTTGTTCATCTGAAAAACCAACCACAGAATTGAGACACGAAGAAATCCCAGGGTGGACATTGTCTGATGTGGAAAAAATGGCCATTGATCCAATCCAACTGGTCAACATGAATGGAAGGATGGATGAAGAAGATGAAGACTATGATGAAGAAAGTTAG 870 0.431 MRKKLDTRFPAARIKKIMQSDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLKDIVSKVPDLGGHAASGDDRTVCKRRKVDDDGNDSEDDAKRNKMPENAHHAGGRGRGRGRGRGRGRGSRTMDREMTANVKSEDDHHTDALKHHDMCTHSDENMEIGTEHEVKPSISKTSEACFRDFDLNMDPVDEDGDSPTSIAPVPQPCPSVKPTPTCSSEKPTTELRHEEIPGWTLSDVEKMAIDPIQLVNMNGRMDEEDEDYDEES 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1492 289 FunFam dr1-associated corepressor homolog 1 86 - -
Prci8g1492 289 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Prci8g1492 289 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Prci8g1492 289 MobiDBLite consensus disorder prediction 104 165 - -
Prci8g1492 289 MobiDBLite consensus disorder prediction 104 133 - -
Prci8g1492 289 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 126 - -
Prci8g1492 289 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Prci8g1492 289 MobiDBLite consensus disorder prediction 145 165 - -
Prci8g1492 289 MobiDBLite consensus disorder prediction 216 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1492 Prci-Chr8 11943195 11947134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1492 1 126 CCAAT-HAP5 Transcription Factor Family AT3G12480 67.669 5.10e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Prci8g1492 CBFD_NFYB_HMF 1.3e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1492 K21752 - qsa:O6P43_020912 323.939