Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1491 ATGAGGAAGAAACTCGATACTCGTTTTCCGGCTGCTCGGATTAAGAAAATTATGCAATCGGATGAGGATGTAGGGAAGATTGCCATGGCCGTGCCTCTTCTTGTTTCCAAAGCACTAGAACTCTTTTTGCAAGATTTATGTGATCGGACGTATGAAATAACGTTGAGAAGAGGGGCAAAGACAATGAATTCTTTCCATTTCAAGGTTCCTGATTTAGGTGGCCATGCTGCTTCTGGAGATGACCGTACTGTCTGTAAGAGAAGGAAGGTTGATGATGATGGAAATGACAGTGAAGATGATGCAAAGAGAAATAAGATGCCAGAAAATGCACATCATGCTGGTGGTAGAGGAAGGGGTCGGGGCAGAGGCAGGGGTCGTGGCCGAGGAAGTAGAACAATGGATCGAGAGATGACTGCAAATGTCAAGTCTGAAGATGATCATCATACTGATGCATTGAAGCATCATGACATGTGCACTCACAGCGATGAAAACATGGAAATTGGCACAGAACATGAAGTGAAGCCTTCCATTAGCAAGACATCAGAAGCATGCTTTAGAGATTTTGACTTAAATATGGATCCTGTGGATGAAGACGGGGATTCGCCGACCAGCATAGCTCCTGTTCCACAACCTTGTCCATCCGTAAAACCAACTCCAACTTGTTCATCTGAAAAACCAACCACAGAATTGAGACACGAAGAAATCCCAGGGTGGACATTGTCTGATGTGGAAAAAATGGCCATTGATCCAATCCAACTGGTCAACATGAATGGAAGGATGGATGAAGAAGATGAAGACTATGATGAAGAAAGTTAG 816 0.4387 MRKKLDTRFPAARIKKIMQSDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHFKVPDLGGHAASGDDRTVCKRRKVDDDGNDSEDDAKRNKMPENAHHAGGRGRGRGRGRGRGRGSRTMDREMTANVKSEDDHHTDALKHHDMCTHSDENMEIGTEHEVKPSISKTSEACFRDFDLNMDPVDEDGDSPTSIAPVPQPCPSVKPTPTCSSEKPTTELRHEEIPGWTLSDVEKMAIDPIQLVNMNGRMDEEDEDYDEES 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1491 271 Gene3D Histone, subunit A 1 69 IPR009072 GO:0046982
Prci8g1491 271 MobiDBLite consensus disorder prediction 69 147 - -
Prci8g1491 271 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 68 - -
Prci8g1491 271 MobiDBLite consensus disorder prediction 127 147 - -
Prci8g1491 271 SUPERFAMILY Histone-fold 4 69 IPR009072 GO:0046982
Prci8g1491 271 MobiDBLite consensus disorder prediction 198 243 - -
Prci8g1491 271 MobiDBLite consensus disorder prediction 80 115 - -
Prci8g1491 271 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 67 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1491 Prci-Chr8 11943195 11947137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1491 1 108 CCAAT-HAP5 Transcription Factor Family AT3G12480 59.398 2.17e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Prci8g1491 CBFD_NFYB_HMF 3.3e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1491 K21752 - qsa:O6P43_020912 280.411