Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g1479 ATGGCTGCAGCTCTGGTGGGGCCAGCATTTCTCTCTGCTTCTGTGAAAACTTTGATAGATAGAATCATCTCAAACGAGTTTCGAGATTTCTTGAGAAATAGAAAGTTGAAAGTCTCTCTCTCAGGTGGGCTGAAGGTAACCCTATTGATGCTTGAAGCAGTTCTTAATGATGCAGAGGAGAAGCAAGTCACCAATGGTTCAGTCAAAGAATGGCTTGAAGAGTTGAAAGATGCTGTTTTCGATGCAGAGGATTTATTTGATGAAATCAACACTGACTTCCTGAGAAGTAAGGTGGAACAAGATTCTGAAAACGTCGAGAATGAGGTGCACTCCTTCTTTTCTTCTTCTCTTGGAAAATTTTACTGGGGTATGAACTCCAAGCTCGAAGCAATGTCAAGTAGGCTTGAACACTTTGCCAAGCAGAAGGATATCTTTGGTTTGCAAAGTGTTAGCTCAAGGGGAATTAAAAGAGCTACAACATCATTGGTAAATGAATCTGCTGTGGTTGGTAGAGAGGATGATCAGGAAAAACTTTTGAACATGCTGTTGTTTAATGAAGATGCAAAGGATAATGATATAGGAGTGATCACTATTTGGGGAATGGGTGGTGTGGGGAAAACAACCCTTGCACAACTCCTTTACAATGACAAGGAAGTGGGACAACATTTCGATTTGAAGGCTTGGGCTTGTGTTTCAAACAATTTTAATGTTTTTGATGTTACCAAGAATCTGGTTGAATCTGTCAATTCAAAAGTCTATCACAATAAAAATTTAGACTTACTTCGGGTTGAACTGAAAAATTGCTTGACCAATAAAAAACTTCTGCTTGTGTTCGATGACATATGGAATGATAAATATAGTGATTGGGATGATCTGGTAACTCCTTTTCGCTGTGGAAGAAGGGGCAGCAAGATCGTTGTAACAACTCGCCAAAAAAGAGTTGCTGAAATCACACGTACGTTTCCTGTATATAACTTGACTCCTCTCTCAAATGAAAATTGTTGGCATTTACTTGCCAAGCATGCTCTTAGAAATGAAGATCCCAACAAATATACAGTGTTAGAAGCAATTGGTAAGAAAATTGCAAGAAAATGTGGTGGTCTACCAATAGCTGCCAAAACAATTGGAGGTCTTTTGCGTTGA 1143 0.392 MAAALVGPAFLSASVKTLIDRIISNEFRDFLRNRKLKVSLSGGLKVTLLMLEAVLNDAEEKQVTNGSVKEWLEELKDAVFDAEDLFDEINTDFLRSKVEQDSENVENEVHSFFSSSLGKFYWGMNSKLEAMSSRLEHFAKQKDIFGLQSVSSRGIKRATTSLVNESAVVGREDDQEKLLNMLLFNEDAKDNDIGVITIWGMGGVGKTTLAQLLYNDKEVGQHFDLKAWACVSNNFNVFDVTKNLVESVNSKVYHNKNLDLLRVELKNCLTNKKLLLVFDDIWNDKYSDWDDLVTPFRCGRRGSKIVVTTRQKRVAEITRTFPVYNLTPLSNENCWHLLAKHALRNEDPNKYTVLEAIGKKIARKCGGLPIAAKTIGGLLR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g1479 380 Pfam NB-ARC domain 172 380 IPR002182 GO:0043531
Prci8g1479 380 Gene3D - 328 380 IPR042197 -
Prci8g1479 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 380 IPR027417 -
Prci8g1479 380 Gene3D - 152 321 IPR027417 -
Prci8g1479 380 PANTHER DISEASE RESISTANCE PROTEIN RP 55 380 IPR044974 GO:0006952
Prci8g1479 380 FunFam Probable disease resistance protein At1g61300 151 320 - -
Prci8g1479 380 Pfam Rx N-terminal domain 10 103 IPR041118 -
Prci8g1479 380 Gene3D - 41 134 - -
Prci8g1479 380 PRINTS Disease resistance protein signature 268 282 - -
Prci8g1479 380 PRINTS Disease resistance protein signature 365 379 - -
Prci8g1479 380 PRINTS Disease resistance protein signature 195 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g1479 Prci-Chr8 11773925 11775067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g1479 168 329 WRKY Transcription Factor Family AT4G12020 26.286 3.86e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g1479 - - pcin:129317298 587.03